Cyanidioschyzon merolae: CYME_CMK050C
Help
Entry
CYME_CMK050C CDS
T00175
Name
(RefSeq) lycopene beta cyclase, chloroplast precursor
KO
K06443
lycopene beta-cyclase [EC:
5.5.1.19
]
Organism
cme
Cyanidioschyzon merolae
Pathway
cme00906
Carotenoid biosynthesis
cme01100
Metabolic pathways
cme01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
cme00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
CYME_CMK050C
Enzymes [BR:
cme01000
]
5. Isomerases
5.5 Intramolecular lyases
5.5.1 Intramolecular lyases (only sub-subclass identified to date)
5.5.1.19 lycopene beta-cyclase
CYME_CMK050C
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lycopene_cycl
DAO
Thi4
NAD_binding_8
Pyr_redox_2
FAD_binding_3
Pyr_redox_3
NAD_binding_9
FAD_binding_2
Motif
Other DBs
NCBI-GeneID:
16994385
NCBI-ProteinID:
XP_005536481
UniProt:
M1V5C8
LinkDB
All DBs
Position
11:143062..144576
Genome browser
AA seq
504 aa
AA seq
DB search
MFVANLPETVYSRRGVLKSPQKSGVCWKLPKTANAAPVKYLERDRRFRKPQVAVCLEAGQ
RLSQQENPPKDTSSLYFDIAIVGAGPAGLALAAELSELNLSSELSPVGKVVSIVVVEKDF
SRRWLPNYGVWVDEVEHLDIKDCFAAVWPKVAVYLPHKIIKKREYARIDRQKLKQKLTAK
CLRNGSGIVLQEGEVKGSDLEKGILRLRCTSANGQFSELEIRARRIVDTTGHSTVLVKFT
EPHHPSYQAAYGIEALVESHPFPLDEMILMDYREPSSIQRLPKGPDSSYYSVPTFLYAMP
MASDRIFVEETSLTARPAVPFEELRDRLYKRLKDLGITVNCALEEEFCLIPMGGSLPDLD
QPLLGFGGTAGLVHPATGYMMARTLNLARPLARAIFLREARNLETNPWKEVLWTRTNVIQ
RDFYTFGGEVLLDMNLNEIQEFFAAFFKLREEAWKNFLSFRQLSGQERLAFGLGVFLKTT
NKVRFKLIRKALQNWRPLIRSILS
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atgtttgtggctaacttgccagaaactgtgtattcgagacgaggcgttttgaagtcaccc
caaaagagtggcgtatgctggaagctcccaaaaactgcaaatgcggccccggtgaaatat
ttggagagggaccgccggtttcgaaagccgcaagtagctgtttgtttggaggctggtcaa
agactttcccaacaggaaaaccctccaaaagatacctcgtcactgtatttcgatattgcc
attgtaggtgcgggtcccgctggcctcgcactggccgcagaactatcggagctgaatctc
agttctgagttgtcacccgtcgggaaagtagtgtctattgttgttgtagaaaaggatttt
tctcgacgttggcttccaaattatggcgtatgggtagacgaggttgagcatctagacatt
aaagactgtttcgctgctgtttggccgaaggtcgctgtctacctgccgcataaaatcatc
aaaaaaagagaatatgccaggattgacaggcaaaaattgaagcagaagctgactgcgaag
tgtcttcgaaacgggtctggcatcgttctccaagaaggcgaggtaaaaggttccgactta
gagaaaggcatcctgagacttcgatgcactagtgcaaacggacaattctcggagctcgaa
attcgagctcgaagaatagttgatacaacagggcatagcaccgtcctggtgaaatttacg
gaaccgcatcatccaagctatcaggcagcctacggaatagaggcactcgttgaatcgcat
ccatttccgctggatgaaatgattcttatggactatcgtgagccatcatcgattcagaga
ttgcccaagggaccggattcctcgtactattctgtacccacattcttatacgcgatgccc
atggcatcggatagaatattcgtagaggagacttctttaactgccagaccagccgtccct
ttcgaagagcttcgcgatagactctacaagcgactcaaagatctcggaataactgtcaat
tgtgcgctcgaggaagaattttgtttgattcctatgggcggttcgttgccggacttggac
cagccactactaggatttggaggaacggcaggtcttgttcacccggcaacgggttacatg
atggctagaactttgaatctggctcgaccgcttgcacgtgccatttttctgcgggaagct
cgaaatttggaaactaatccttggaaagaagtactttggaccagaaccaacgtaattcag
cgtgatttctacacattcggtggcgaggttctacttgatatgaatttgaacgaaattcaa
gaattttttgcagcattcttcaagctccgcgaagaagcctggaagaattttttgagtttc
cggcaactttcagggcaggaacgcttggcgttcggattaggtgtctttttgaaaacaacg
aacaaggttcgtttcaagctgattaggaaggcactgcagaactggcgtcctcttataaga
agcattcttagctaa
DBGET
integrated database retrieval system
