Cyanidioschyzon merolae: CYME_CMK097C
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Entry
CYME_CMK097C CDS
T00175
Name
(RefSeq) serine--tRNA ligase, chloroplast or mitochondrial
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
cme
Cyanidioschyzon merolae
Pathway
cme00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
cme00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
CYME_CMK097C
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
cme01007
]
CYME_CMK097C
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cme03016
]
CYME_CMK097C
Enzymes [BR:
cme01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
CYME_CMK097C
Amino acid related enzymes [BR:
cme01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
CYME_CMK097C
Transfer RNA biogenesis [BR:
cme03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
CYME_CMK097C
Prokaryotic type
CYME_CMK097C
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
Phe_tRNA-synt_N
DUF481
TetR_C_24
DUF1993
TEX13
Motif
Other DBs
NCBI-GeneID:
16994451
NCBI-ProteinID:
XP_005536521
UniProt:
M1V5D6
LinkDB
All DBs
Position
11:complement(272182..273822)
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AA seq
546 aa
AA seq
DB search
MEPARGGEERSLTSFVHSIGLRKRMRWIQSAGNWLRVLRTGYPAVAGSIAEARATRPYRM
RGWLGDGTSFRPSAFRCRHSDSRCATPTNMMLTRVSGTPPPVDLRYVRDHLAQVQENIQR
RGVDVNATLVVQLYERFCALTAEVDLVRKQRNEVAARMKNMQKLSPEERSECIALGKQLK
ERVTALEAELAETEQQLYAEAVRIPNRTHPDAPVGGEDQARLLRMAGKPRDFTDFSPKDH
VELAQRLDIVDFEAAAKVAGARFYFLRNAGAMLELALVNWAMQHLTGKHGFIPLIAPDLV
REETVWGCGFQPRGEASQVYSVADTSLCLAGTAEIPLGGYYANEILDETQLPIKMAAVSH
CFRREAGAAGTETRGLYRVHQFTKVEMFVLSRPEESDRVHQELRSIEEELFDALGLHYRV
LDMPTRELGNPAYRKFDIEAWMPGRNAFGEISSASNCTDYQARRLNIRYREQVSEKLRFV
HTLNATACAVPRMIVSILENFQEKDGSVTIPQVLRPFLAGLERIQVPPERHTPSRITEPA
GAQPTR
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atggaacctgctcgtggaggcgaggaaagatcgctcacctccttcgtacattcgataggt
ttaagaaagagaatgcgatggatccaatcagcagggaactggttgcgagtgcttcgtact
ggctatccagcagttgccgggtccattgcggaggcacgggcaacgcgtccgtaccgaatg
cgaggctggctcggtgacggcaccagtttccgacccagtgcgtttcgttgtcgacattct
gatagccgttgcgctactccaacaaacatgatgctgacgcgagtgtctggcacgccgcca
ccggtcgaccttcggtacgtacgagatcacttggcgcaggtccaggagaatatccagcgg
cgcggagtcgacgtcaacgccacccttgtagtgcagctgtatgagcgtttctgcgcgctt
acggcggaggtggatctagtccgaaaacagcgcaacgaggtggcagcccgcatgaagaat
atgcagaagctctcgcctgaggagcgctccgagtgtatcgcacttggtaagcagttgaaa
gagcgagtgactgcgcttgaggctgaacttgccgagaccgagcaacaactctatgcagaa
gcagtacggatacccaaccggacccatcctgatgctcctgtaggcggcgaggatcaagcc
cgactcttgagaatggcgggcaagcctcgtgattttacagacttttcgccgaaagaccat
gtggagttggcgcagcgacttgatatagtggatttcgaggccgccgccaaagtagctggg
gcgcgcttctattttcttcgcaatgcaggggcaatgctcgagctggcgttggtgaactgg
gcaatgcagcaccttaccggtaagcacggtttcatacctctgatcgcacccgaccttgtg
cgcgaggaaacggtttggggttgcggattccagccccgcggcgaagcgtctcaagtatat
tcggtggcagatacctcgttatgcctggcgggcacagcggaaataccgcttgggggatat
tatgcgaacgagatactcgacgagacgcagcttccgatcaagatggcagccgtcagtcac
tgtttccgtcgtgaagccggtgctgccggcaccgagacgcgcggtctgtatcgagtccat
caattcaccaaagtggaaatgttcgtgctttcaagaccagaggaaagcgatcgagttcat
caggagcttcgatctatcgaggaggagcttttcgatgcacttggtctccattatcgggtg
ctcgacatgccgactcgggaactgggaaacccggcctatcgcaaatttgatattgaggcc
tggatgccgggtcgcaacgcctttggcgaaatcagcagtgcaagcaactgcaccgactac
caggcccggcgtctgaatatccgatacagagagcaggtttcggaaaaactgcgcttcgtg
catacactcaacgcgactgcctgcgcagtgcctcggatgattgtgtctattctggaaaac
tttcaggaaaaagacggttcggttacgattccgcaagtgcttcgaccgtttctcgctgga
ttggagcgcattcaagtgccgcccgaacggcacactccatcccgcatcacagaaccggct
ggagcccagccaacacgttga
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