Cyanidioschyzon merolae: CYME_CMK205C
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Entry
CYME_CMK205C CDS
T00175
Name
(RefSeq) RNA lariat debranching enzyme
KO
K18328
lariat debranching enzyme [EC:3.1.-.-]
Organism
cme
Cyanidioschyzon merolae
Brite
KEGG Orthology (KO) [BR:
cme00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cme03041
]
CYME_CMK205C
03009 Ribosome biogenesis [BR:
cme03009
]
CYME_CMK205C
Spliceosome [BR:
cme03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
CYME_CMK205C
Ribosome biogenesis [BR:
cme03009
]
Eukaryotic type
90S particles
RNase
CYME_CMK205C
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DBR1
Motif
Other DBs
NCBI-GeneID:
16994325
NCBI-ProteinID:
XP_005536603
UniProt:
M1VD09
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All DBs
Position
11:complement(559019..560155)
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AA seq
378 aa
AA seq
DB search
MVWLGVAGCVHGRLDFLYEQFIEETHTRGIQCKLLLCCGDFQSIRDEEDLKSMSCPRQYR
ELGDFPKYYSGEKTAPCLTIFIGGNHEASRYLQEIPLGGWVAPRIFYLGRAGILRNARHD
YRIGGISGIYYPKDYFRPRDEGVLLHGSQIHTVYHTRKTEWRLLLHALHWNAFYGGSFSP
ETDIASRDRCHVFLSHDWPRGVMAYGDCSTLWTRKQWMQRAHQRGIDGSPALAELMESSA
APRYWFAAHHHCRFAASTPQGTSFTALDQTLPGCPFLTFVELPGAESADPVSDMEYDLRW
LRCVQRHYRGEREPSGSISLAALQRVFESTRQKRASETPAPGYGNETAPNPQTSFLLGEL
GISWERLYNVDGVQANPQ
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atggtgtggctcggtgttgccggttgcgtccacggacgactggactttctctacgagcag
tttatcgaagaaacgcacacacggggcatccaatgtaagctccttttatgctgcggagac
tttcaaagcatccgcgatgaggaggacctcaaaagcatgtcatgtccgcgtcagtatcgg
gaacttggggactttcccaaatactactccggcgagaagaccgcgccctgccttaccata
ttcattggcgggaatcacgaggcctcgcgttatctgcaggagatcccgctcggaggctgg
gttgcaccgcgaatcttctacctcggtcgagcggggatcctgcgcaatgcccgtcatgac
tatcgaattggcggtatcagcggcatttactacccgaaagattattttcgaccgcgtgat
gaaggcgtccttctccatggttcacagattcacactgtgtatcacacgcgcaagaccgaa
tggcgtctgcttttgcatgcactccactggaacgcgttctatggtggttcgttttctccg
gagaccgacatcgcttctcgggaccggtgccatgtcttcctatctcatgattggccgcgt
ggtgtcatggcgtacggtgactgctccacgctgtggacgcgcaagcagtggatgcaacgg
gcacaccagcgcggtatagacgggtcgccggccctcgcggaactcatggagagcagcgcc
gctccccggtactggtttgcggcgcaccatcactgccggtttgcggcatcaacaccacag
ggtacctcctttactgctttggatcagacgcttcccgggtgtccgttcctcacgttcgtt
gagttaccgggcgccgaatccgctgatccggtgtcagatatggaatatgatctgcggtgg
cttcgttgcgtacagcgccattatcgaggcgagcgggaaccgagcggctcgatcagtctg
gcagctttgcagcgcgtatttgaaagcactcgacagaagcgagcgtccgagacaccagca
ccgggatacggaaatgaaacggcgccgaatccgcagacatcgtttctcctgggtgagctc
ggtatcagttgggagcggctctacaacgtggatggggttcaggcgaatccgcaatag
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