Cyanidioschyzon merolae: CYME_CMK240C
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Entry
CYME_CMK240C CDS
T00175
Name
(RefSeq) hypothetical protein
KO
K13202
target of EGR1 protein 1
Organism
cme
Cyanidioschyzon merolae
Brite
KEGG Orthology (KO) [BR:
cme00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cme03041
]
CYME_CMK240C
Spliceosome [BR:
cme03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
CYME_CMK240C
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Gene cluster
GFIT
Motif
Pfam:
CAF1
zf-CCCH
zf_CCCH_4
Motif
Other DBs
NCBI-GeneID:
16994240
NCBI-ProteinID:
XP_005536628
UniProt:
M1VD24
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Position
11:complement(658843..660711)
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AA seq
622 aa
AA seq
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MRSDSFGCRCYRFDRRNHRDGLEALGQCLRHCTFLAVDVEFSGTGEDPAVHSADLSVRYE
ALRRLAGTSAIFSVGIVCFTAKCEELHRAICGLSEVTADREALQVQVPAVCAYQAHVLEF
YFHCQDAFTISGDTAAFLVRHGMDFNRVFAHGIPYRRVAAAEDALHEAARAVPAPGGTTE
DAASQSGFGHISVARERGLGAERTPEPKRLRRRTQRHRGCNSTAQPAAEPLHVLSVLLGS
GKPVIFHNGLYDLLLMFAAFEAPLPPSVEEFRTQLATRCPGYFFDTRVLGEFVPARLRDC
PAYLEYVFRKYERRWFRTQRGVRIEFPELAAPGYVSKKATIYGSRAAASPAAIPRVCKRY
ARSGHCRLDGDCRFSHDIDQIIDADEASKTETGDGFDEAVAVEACQPNGGHAVREMESAC
TLDTSPAAICETLKSQHISLDLSESLGIPVSERPTEQPSSVDAFVTSFSPDESEHLEDRS
AGQKPPETYPKRSNDPVSGCRAAATAACQSSLGNSMFVAGDDNAEAARFASMPPLHADAA
SGDAQSATLDRAAHSAGYDAFCTGYVFASMLALPSVQLARVSSFANRIYLTGSAPQTLCL
TPGSSPVASQLEPVINSGAGDS
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgcggtctgactcttttggttgcaggtgttaccgctttgataggcggaatcatcgagat
ggtctcgaagcgcttggccaatgtcttcgccactgcacgttcctggctgttgacgtagag
ttttcaggaactggcgaggatcccgcggtccactctgcggacctcagtgtacgctatgaa
gcccttcgccgcttagcggggacgagcgcaattttctcagtcgggatcgtttgcttcacc
gccaagtgcgaggagctgcacagagcgatttgcggcctcagtgaggtaaccgcggaccgg
gaagcgcttcaggtgcaagtgccagcagtctgtgcctatcaggcccacgtcttggagttt
tactttcactgtcaggatgcttttacgatatccggtgatactgcagcttttttggtacgg
catggtatggactttaacagagtgttcgcacacgggattccgtaccggcgcgtcgctgct
gctgaagacgcgctccatgaggcagctcgtgcagtgccagctcctggaggcacaaccgag
gatgcagcgtctcagtcgggtttcggtcatatcagcgttgcccgcgaacgcggcttgggt
gccgagcgcacaccagagcccaagcgtcttcgtcgccggacccagaggcatcgtggatgc
aactcgacagcgcagcccgcggccgagccgctgcatgtactgagcgtcctcctgggcagc
ggtaaacccgtcattttccacaacggactctatgatctgttgcttatgtttgcggcgttc
gaagcgccgctaccgccgagcgtcgaagaattcaggacgcagctagcaacgcggtgtccc
ggctactttttcgatacgagagtgctgggagagttcgtgcccgcacgtctacgtgattgt
cccgcatatctggagtacgtctttcgcaaatatgagcgtcgatggtttcggacccaacga
ggtgtccggatagaatttccggagctcgcagcgcccggttacgtctccaagaaagcgaca
atttatgggtcgcgagccgcagcttctcccgctgcgatccctcgagtctgcaagcggtat
gcgcgttcaggacattgccgcttggatggagactgtcgtttctctcacgacatcgatcaa
atcattgacgcagatgaagcttcaaaaactgaaacaggtgacggcttcgatgaagcagtt
gcagtagaggcatgccaacccaacggcgggcacgctgtgcgagagatggagagtgcatgt
accctggacacgagtcccgcagccatctgcgagaccctgaagtcgcagcatatatcgctg
gacttgagtgaatctttggggataccggtttcagaacggccaacggagcagccttcatcg
gtggatgcgtttgtcacgagtttctctccggatgaatcggaacacctcgaggacaggtct
gctggacagaaacctcctgaaacttaccccaaacggtcgaatgatccagtctctggctgt
cgagcagcagcaacagcagcgtgtcaatcatccttgggtaacagtatgtttgtcgctggc
gatgataacgcagaggcagcgcgcttcgcgtcgatgcctccgttgcatgcggacgctgct
tcgggcgatgcccagagtgctacgttggacagggcagcccattcggcaggatatgacgct
ttctgcaccggttacgtctttgcgagcatgttggcgttgcccagtgtgcaacttgcgcga
gtttcttcctttgcgaacaggatttatctcacaggcagtgcaccccagacgctctgtcta
acacccgggagctcaccggtcgcttcacagctggaaccagtaataaacagtggcgcggga
gactcttga
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