Cyanidioschyzon merolae: CYME_CMK256C
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Entry
CYME_CMK256C CDS
T00175
Name
(RefSeq) hypothetical protein
KO
K14829
pre-rRNA-processing protein IPI3
Organism
cme
Cyanidioschyzon merolae
Brite
KEGG Orthology (KO) [BR:
cme00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cme03009
]
CYME_CMK256C
Ribosome biogenesis [BR:
cme03009
]
Eukaryotic type
Pre-60S particles
5-FMC complex
CYME_CMK256C
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EML_2
WD40
WD40_WDHD1_1st
ANAPC4_WD40
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_RIG_2nd
Hira
Motif
Other DBs
NCBI-GeneID:
16994247
NCBI-ProteinID:
XP_005536639
UniProt:
M1VHY1
LinkDB
All DBs
Position
11:complement(698853..700400)
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AA seq
515 aa
AA seq
DB search
MSAYLGSDVLSVSVSEDGSSGRALLWNTRERVVRRELQLTRPTGAQRLGIGRAAAPEVSG
SLRAQTFCPVLASPATWDRYVFGVNTGLHKSCIKFFTLERDSEVAQVTLGENLTALACSH
GGHFLAAGTAQGLGYLWDLHTGVLLAPSAGSGPSSAAANTETGHQSAAAWELQLLAVTTL
VFTLDDAFLVTGGEDGSITVWATSELFAGQTHQPWRRFPAVHAGAVVALHLGAAWQLHTA
RIYSLGRDRTLRILDFPTGMQLANIHLSMQGTSLVVDDVFERAAYVGHITGDVLRICLPS
LSLDSTRTLLIKKPLVNLESDGHSATTSTSWLRGFTERDVPEKRAIRTLALVEDGSILAY
GNENGSVGLIHLNSNAVVAEFRGQKAHRSETVYLVTRIPPSDGAVPRWLWQRDVYVNEKK
RQWSTGGTRHAPRVAPRFSLESKPYGESFELVDSLATRSTAVAAAAAGAANATNSGETAD
AAIVPARKHERDRFVAWTSVCMDRLLAQLDQREDT
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcctatttaggttctgatgtactctccgtatccgtttctgaggacggatcgtcc
ggcagggcactcctctggaacacgcgagagcgagtcgtgcgacgcgagctgcagctcact
cggccaacaggcgctcagcgactaggtataggacgcgctgcggcccctgaggtgtcgggc
tcgttacgtgctcaaacattttgccctgtgcttgcgtcgcctgctacctgggatcgatat
gtgtttggagtgaacaccggtctccataagagctgcattaaatttttcacgctagagcgc
gactcggaagtcgcccaggtgacgctgggcgagaacctaacggccctggcgtgttcccac
ggaggccactttctagctgcgggcacagcgcagggtctcgggtacctgtgggacctgcac
actggagtcctgcttgcgcccagtgcgggatcgggaccaagcagtgccgccgcaaacact
gaaaccgggcatcagtcggctgccgcttgggagctgcagcttctcgcggtgacaacgctg
gtgttcactctagatgatgcgttccttgtaactggaggcgaagacgggagtatcacggtt
tgggcgacatcggagctgtttgcggggcagacgcaccaaccatggcgccgtttccctgcg
gtacatgctggtgcagtagttgcgctccatctgggcgctgcctggcaactgcataccgcc
cgaatatatagcctcgggcgagacaggacattgcggattctcgactttcccaccggcatg
cagctggcgaacatccatctgagtatgcaaggaactagcctggtggtggatgacgttttc
gagagggccgcgtacgtgggtcacattaccggcgatgtgctccgcatttgtttgccgtct
ttgagtcttgattcaacgcgcacgctgctgatcaagaaaccgctagtcaatctcgagagc
gacgggcatagtgccaccacatcgacctcgtggcttcgtggcttcaccgagcgggatgtg
ccagaaaagcgggctattcgcacactggctctcgtcgaggatggctccatacttgcctac
ggtaacgaaaatggtagcgtcgggttgattcatctgaacagtaacgccgttgttgccgag
tttcggggccagaaagcgcaccgcagcgaaaccgtctacttggtgactcgtatcccgcca
tccgacggtgccgtgccccggtggctctggcagcgagatgtctacgtgaacgaaaagaaa
cgccagtggtctaccggtggtacgcgtcatgcaccgcgggttgcgccacgcttttccttg
gagtcgaaaccctatggggaatccttcgagctggtcgattcgctggcaactcgttcgact
gctgtggcagcggcagccgctggtgctgcgaacgccacaaactcgggcgagacggcggat
gcggcgatcgttcccgcccgtaagcatgaacgagaccgtttcgttgcctggactagcgtc
tgcatggataggctgcttgcgcaactagaccaacgcgaggatacctga
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