KEGG   Cyanidioschyzon merolae: CYME_CML077C
Entry
CYME_CML077C      CDS       T00175                                 
Name
(RefSeq) transcription initiation factor IIB
  KO
K03124  transcription initiation factor TFIIB
Organism
cme  Cyanidioschyzon merolae
Pathway
cme03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:cme00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    CYME_CML077C
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cme03021]
    CYME_CML077C
Transcription machinery [BR:cme03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIB
     CYME_CML077C
 Prokaryotic type
  Archaeal type
    TFB
     CYME_CML077C
SSDB
Motif
Pfam: TFIIB Zn_Ribbon_TF Zn_ribbon_RRN7 Auto_anti-p27
Other DBs
NCBI-GeneID: 16994788
NCBI-ProteinID: XP_005536732
UniProt: M1USL8
LinkDB
Position
12:172117..173250
AA seq 377 aa
MSAPTMERDVPDVCGECGSTDLVEDTKNGDLVCAQCGVVAAELLIDLGHEWRTFENDDSA
YDPNRVGGSINPLLDSGLATSISQGPAGANALNERLARAQSRNVLDANDRYVTECYNRIS
YLCERSGLPQLVKDRACELLRLYYDHLTLGADGVRARARFREDETASIISAALFIACRNE
GFPRTFNEISVIVSVAKSRVAAYVKAMEMSIGEAAKISRIRTTDDFVSRFCSYLEIPNIV
RSLVNQVARAAAEKDGIHGRTLVSIAAGAIYFVLLLWRETCPQSIPATLRVSDEALVNRI
AEVSGITEGVVKTVASRIRQYRDRGLLPPDWVRRFPSRLEPELPTSSSERQDPTGNELIH
EQSAPTVSSKRPRQGSH
NT seq 1134 nt   +upstreamnt  +downstreamnt
atgtctgcaccgacgatggaacgcgatgtgcctgacgtgtgcggagagtgcggaagtacg
gatctcgtcgaggacaccaagaacggggacctcgtctgcgcccagtgcggtgttgtcgct
gccgagctgctcatcgacctgggccacgagtggcgaactttcgaaaacgacgattcggca
tacgatccgaatcgagtcggtgggagcataaatcccctgctagacagtggcctcgccacc
tcaatctcacaaggaccggccggtgccaatgccctgaacgagcgtctagctcgagcgcag
tcacgaaacgtgcttgatgcgaacgaccgctatgtcacggagtgttataaccgaatctct
tacctgtgcgagcgctctggcctaccgcagctcgtgaaggatcgtgcttgcgagctcctc
agactctactacgatcacctgacgttaggtgcagacggggtgcgagctcgtgctcgtttt
cgtgaggacgaaaccgcctcaattatctctgcagcactgtttatcgcctgtcgcaatgaa
ggctttccacgcaccttcaatgaaatctcggtcatcgtatctgtcgccaagtctcgcgtt
gcggcatacgtgaaggcaatggagatgtcgattggcgaggcagccaaaatcagtcggatt
cgcaccacagacgactttgtctcccgtttctgctcctatttagagatcccgaacatcgtg
cgctccctcgtgaatcaggtcgcacgggcagcagctgaaaaagatggcattcatggtcga
acactggtatcgattgcggctggtgccatctatttcgtcctgttgttatggcgggagacg
tgcccacagagcattccagcaacgttgcgagtgagcgatgaagcgctcgtgaaccgaatc
gctgaagtttcaggtataacagagggtgttgtgaagacggttgcgagtcgaattcggcag
taccgggatcggggtctgctgcccccggactgggtccgtcgcttcccgtcgaggcttgag
ccagagcttccgacgtcttcgtctgagcgacaagatcccacggggaacgagctaattcat
gaacagtcggcaccaacggtgtcatcgaaacgtccacgtcagggaagccactga

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