Entry |
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Name |
(RefSeq) transcription initiation factor IIB
|
KO |
K03124 | transcription initiation factor TFIIB |
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Organism |
cme Cyanidioschyzon merolae
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Pathway |
|
Brite |
KEGG Orthology (KO) [BR:cme00001]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
CYME_CML077C
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:cme03021]
CYME_CML077C
Transcription machinery [BR:cme03021]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
CYME_CML077C
Prokaryotic type
Archaeal type
TFB
CYME_CML077C
|
SSDB |
|
Motif |
|
Other DBs |
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LinkDB |
|
Position |
12:172117..173250
|
AA seq |
377 aa
MSAPTMERDVPDVCGECGSTDLVEDTKNGDLVCAQCGVVAAELLIDLGHEWRTFENDDSA
YDPNRVGGSINPLLDSGLATSISQGPAGANALNERLARAQSRNVLDANDRYVTECYNRIS
YLCERSGLPQLVKDRACELLRLYYDHLTLGADGVRARARFREDETASIISAALFIACRNE
GFPRTFNEISVIVSVAKSRVAAYVKAMEMSIGEAAKISRIRTTDDFVSRFCSYLEIPNIV
RSLVNQVARAAAEKDGIHGRTLVSIAAGAIYFVLLLWRETCPQSIPATLRVSDEALVNRI
AEVSGITEGVVKTVASRIRQYRDRGLLPPDWVRRFPSRLEPELPTSSSERQDPTGNELIH
EQSAPTVSSKRPRQGSH |
NT seq |
1134 nt +upstreamnt +downstreamnt
atgtctgcaccgacgatggaacgcgatgtgcctgacgtgtgcggagagtgcggaagtacg
gatctcgtcgaggacaccaagaacggggacctcgtctgcgcccagtgcggtgttgtcgct
gccgagctgctcatcgacctgggccacgagtggcgaactttcgaaaacgacgattcggca
tacgatccgaatcgagtcggtgggagcataaatcccctgctagacagtggcctcgccacc
tcaatctcacaaggaccggccggtgccaatgccctgaacgagcgtctagctcgagcgcag
tcacgaaacgtgcttgatgcgaacgaccgctatgtcacggagtgttataaccgaatctct
tacctgtgcgagcgctctggcctaccgcagctcgtgaaggatcgtgcttgcgagctcctc
agactctactacgatcacctgacgttaggtgcagacggggtgcgagctcgtgctcgtttt
cgtgaggacgaaaccgcctcaattatctctgcagcactgtttatcgcctgtcgcaatgaa
ggctttccacgcaccttcaatgaaatctcggtcatcgtatctgtcgccaagtctcgcgtt
gcggcatacgtgaaggcaatggagatgtcgattggcgaggcagccaaaatcagtcggatt
cgcaccacagacgactttgtctcccgtttctgctcctatttagagatcccgaacatcgtg
cgctccctcgtgaatcaggtcgcacgggcagcagctgaaaaagatggcattcatggtcga
acactggtatcgattgcggctggtgccatctatttcgtcctgttgttatggcgggagacg
tgcccacagagcattccagcaacgttgcgagtgagcgatgaagcgctcgtgaaccgaatc
gctgaagtttcaggtataacagagggtgttgtgaagacggttgcgagtcgaattcggcag
taccgggatcggggtctgctgcccccggactgggtccgtcgcttcccgtcgaggcttgag
ccagagcttccgacgtcttcgtctgagcgacaagatcccacggggaacgagctaattcat
gaacagtcggcaccaacggtgtcatcgaaacgtccacgtcagggaagccactga |