| Entry |
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| Name |
(RefSeq) similar to nucleotide excision repair complex subunit XPC
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| KO |
| K10838 | xeroderma pigmentosum group C-complementing protein |
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| Organism |
cme Cyanidioschyzon merolae
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:cme00001]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CYME_CML097C
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:cme03400]
CYME_CML097C
DNA repair and recombination proteins [BR:cme03400]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
CYME_CML097C
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
12:216347..219889
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| AA seq |
1180 aa
MTSGQGGGGSATPEESSVVGTLQTASNDAVQRTLDRATKRTRRTDAANAAAAPQAPTRIV
REARRAALEALKRLNVADVEVAEESPDTKPPRRTVPTTALQENPRALSPAADLEKDIEWE
SAWTEGAAEQPSPVQTKDQLEVVLELDEEGTDSASGVSRSQADSTGSDADHRAAKRRRGS
LATKRKMTKTFSAAERANALRIHRIHLLCMLASSLTFDRLSSAATIQARALSLVPCEVIE
RFDRIPEDALRETSSSLAEALTYFVVWFASNYRQSSFPCEVCCPDESGYSVPVPRTPHTR
LEHAMLHGLGGEQELVALACAMLRALLGRLNFQSQARPEGKRVQSAPVPDGSTVLLKRYG
LVRFVAGPNIIGRKPEHLELVDQGSGLPTWQARLSAILEHWFPPAPADVPPSKKQCPLEP
PLNRKRPGKPLRNSRSSHGLQQKHAMQAHGVEAQPPAVHSKASTLDADTGEASLPRRALE
SPQVRQRDVHHQQQQAGRGLSTSKTQRTRQNWLTRDSKRTASALESAERYSNPRGNTRST
YLWAYQIQSAFLAPWRVGVNISPQVAHRRTAESSDRSSQARKTGRLWSLSVPGRWNLTNA
DPYRVPQYWLEVWDPTQQHWIHLDPMRCLVDDPLAVTVLPWWTRTTRPLPRSAATGQRDR
HLNPSKTRSLKGDVSNEPREEDDGDGNRIQRPKRRSSRLRPDATYNEMDGRSGDRSQSES
DTASSELETPELPTNRWKRERAERVVPYIFALEHGFGRDVTRRYTTRFQPVLEARSLDGH
RYWTEEVLPMLSPFQPRTHLIETEHDAIDDDAFRERSTLWNALDNLEQNEFWGLHEAEPI
PRSISALKNHPAFVLEEHLKKYEAIHPKLAIGNIQRIQPNGRIQTIPVYRRRDVHLLHTR
ERWFRECRIVRESELPYKIVQSFMSRFRQRREERRRERRQQAPEELEDSSTATAGPTELF
GIWQTDPMPRPRAENGIVPRCGLRGNIELWTPNHLPLGTTHVDLPFAAMFARRLGFDFVP
AMVGFEVRACGFVPAIRGVVVCTENAAALTDACEAEIKRRRERAEKRMREDALRRWRQLI
RTIVAKERLRKRYGGFQVQDTNATFSSRKAGKQTSSSSAAEPAKRERVPAATAAGADDDA
DQRAAHEHEWVFVGASNSQDALGRKQCALCGLCVTYESLL |
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| NT seq |
3543 nt +upstreamnt +downstreamnt
atgaccagcggtcagggcgggggcggttcagctacaccggaagagtcttcggttgtcgga
acgctgcaaaccgcatcgaacgatgcggttcagagaacgctggatcgagcaacaaagcga
actcgtaggacggacgccgcaaacgccgctgcagcaccgcaagcacccactcgcatagtg
cgggaagctcgtcgtgcagcactggaagctctgaagcgattgaacgtggcggatgttgag
gtcgctgaagaaagcccagacacgaagcctccgcgtcgcactgttccaaccacagccctg
caggagaatccgcgcgcactctcgcccgcagcggacctcgagaaggatatagagtgggag
tctgcttggacagagggtgcggcagagcagccatctcctgtgcaaacaaaagaccagcta
gaagttgttctcgagctcgacgaagagggtacagatagcgcgagcggggtgtcccgttcg
caagctgactccactggctcagacgctgatcatagggctgcgaagcgccggcgaggatca
cttgcaaccaagcgaaaaatgaccaagacattttccgctgcagagcgtgccaatgcttta
cgcatacatcgcatacatcttctatgtatgctggcgtcgtcgctcactttcgatcgactt
tccagtgcggcaactatccaggcccgcgcactctccctagttccatgcgaggtaatcgag
cgttttgaccgaatccctgaagatgcccttagggagacttcgtctagtcttgcagaggct
ttgacgtattttgtggtctggtttgcgtcgaactaccggcagtcatcgttcccctgtgag
gtatgctgccccgacgaatcaggatattcagtgccagttccacgcacaccacatacccgt
ctagagcacgctatgctgcatggcttgggtggtgaacaagagctggttgctcttgcatgc
gccatgctacgagcgttgctcggtcgtttgaactttcagtcgcaagcgcggcctgagggc
aagcgcgtgcagtccgccccagttcccgatggcagcactgtgctgctgaagagatacgga
ctcgtgcgattcgttgcaggcccaaatataattggccgcaaacccgagcacttggaactt
gtcgatcagggatctggtttaccgacttggcaagcacgactttcggccatcctggagcat
tggtttcctccagctccagccgatgtgcctccatcgaaaaagcaatgtccattggaacca
ccactcaatcggaaacgacccggtaagccactgcggaactctcgatcgtcgcacggtcta
cagcagaagcatgcgatgcaggcacatggagtcgaagcgcagccgcccgcggtacactcg
aaggcgtcgactttggatgcagacactggagaagcctcgttgccgcgacgcgcccttgaa
tcgccgcaagtgcggcaacgtgacgttcatcatcagcagcagcaagctggacgcggcctc
tcgacaagcaaaacccaaagaacgcgccagaactggcttacgcgcgacagcaaacgtacc
gcaagtgcgctcgagtccgctgagcgctactccaatccaagaggcaatacgcgttcgaca
tacttatgggcgtatcagattcaatcggcttttctcgcgccgtggagagtgggcgtgaac
atatctccgcaggttgcccatcgtcgcacagccgagtcgagcgatcggagctcgcaggcc
agaaagacgggtagattatggtccttgtctgttcctggtcgatggaatctcacgaacgcg
gatccttaccgagtgccgcaatactggctggaggtatgggatccgactcaacagcactgg
atccatctcgatccgatgcgatgcttggtcgacgacccgctagccgtcacggtgctgcct
tggtggacccgtacgacgcggcctctgccccggtccgcggcaactggccagcgggatcgg
cacctgaatccgtctaagacaagatccctgaaaggagacgtttccaacgaaccacgggaa
gaagacgacggtgacggtaatcgtatccaacgaccgaagcgacgctcatcaaggctgcgt
cccgatgcaacatacaatgagatggatgggcgcagtggagatcgctcacagagcgagagc
gacacggcgtcgagcgagctcgagactcccgagctccccacgaatcgatggaaacgggag
cgtgccgaacgagttgtcccgtatatcttcgcgctggagcatggatttggacgtgacgtc
acccgccgctacacaacccggttccaacctgtactcgaggctcgcagtcttgacggtcat
cgctactggaccgaggaggtgctcccaatgctgagcccctttcagccacgcacacacctg
attgaaacagagcacgacgctatcgacgacgacgcgttcagggaacgcagcacgctctgg
aatgcactggacaatttggagcaaaatgaattttggggattacatgaagcggaacccatt
cctcgatccatttctgcgctgaaaaatcaccccgcttttgtgcttgaggaacatttgaaa
aagtatgaggcgattcatccgaagcttgccatcggaaacatccaacgcatccagccaaac
ggacggattcaaactatacctgtctaccgtcgacgagatgttcacctgttgcatacccgg
gagcgctggtttcgtgaatgccgaatcgttcgggagagcgagctgccctacaaaatcgtg
caatcgttcatgtcccgttttcgacaacgtcgtgaagaacgacgtagagaacggcgccag
caagcacctgaagagctcgaggattcgtcgactgccaccgcaggtccgacggaactattc
ggtatttggcagacggaccccatgccgcgacctcgagctgaaaatggtattgtccctcga
tgtggcctgcggggcaatatcgagctctggacgccgaatcacctgcctctgggaacaacg
catgtcgacttgcctttcgctgccatgtttgcgcgccgtctcggctttgacttcgtacca
gcgatggtcggttttgaggtacgagcatgcggcttcgttccagctattcgcggtgtcgtc
gtctgcaccgaaaacgctgcagcgcttacggatgcatgtgaagcagagatcaagcggcga
cgagaacgagccgaaaaaaggatgcgagaggacgcgctgcgacgctggcgacaactcatt
cggactattgtagcgaaagagcgtttgaggaaacgatatggcggatttcaggtccaggac
acgaatgcaacgttctccagtcgcaaagcgggcaagcagacgtcttcatcgtctgccgcg
gaacccgcgaaacgagaacgcgtgcctgccgcaaccgctgcaggagcagacgacgacgct
gatcagcgtgccgcccatgaacacgagtgggtctttgtgggcgcttcgaattcccaggat
gctctcgggcgcaagcagtgtgcactctgtggtctctgcgtcacctacgagtctctgttg
tga |
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