Cyanidioschyzon merolae: CYME_CML129C
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Entry
CYME_CML129C CDS
T00175
Name
(RefSeq) similar to V-SNARE protein of ER-Golgi docking complex
KO
K08516
synaptobrevin homolog YKT6
Organism
cme
Cyanidioschyzon merolae
Pathway
cme04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
cme00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
CYME_CML129C
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cme04131
]
CYME_CML129C
Membrane trafficking [BR:
cme04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
Ykt6
CYME_CML129C
BRITE hierarchy
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Ortholog
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GFIT
Motif
Pfam:
Longin
Synaptobrevin
7TMR-HDED
Motif
Other DBs
NCBI-GeneID:
16994530
NCBI-ProteinID:
XP_005536774
UniProt:
M1VI81
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Position
12:293890..294501
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AA seq
203 aa
AA seq
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MRLYALTILRRRSDETEPTLLSAAYELSDFNYFQRSSVREFAAFFAKLIAKRVTLGERLS
VDHENYVCYAYARVNGVIAVALCDAEYPQRVAFSLLGQVLDEFRRTFPESQYLQVPAEAI
QVREFPYLADRLQRYQNPVEADPLMRIEKDLDETKSTLHQTIDSILERGVKLDQLVDKSN
DLSLQSKMFYRTARKQNSCCNLS
NT seq
612 nt
NT seq
+upstream
nt +downstream
nt
atgcgtctgtatgccctaacgatactgcgaagacgcagtgatgaaaccgagccgacgctt
ctgagcgctgcctacgaactaagcgactttaactacttccagcggagtagcgtacgcgag
tttgctgccttctttgcaaaactgattgcgaagcgagtcacactcggagagcgcctatct
gtggatcacgagaactacgtatgttacgcttacgctcgtgtgaatggcgtgatcgcagtt
gcgctatgcgatgcggaatatccacaacgcgttgcatttagtctcctggggcaggtcctg
gatgagtttcgccgaacctttcccgagtcgcagtatctccaggtacctgcagaagcgatc
caagtacgagagtttccgtacctcgcggatcgtctccagaggtaccaaaatcccgtggaa
gcggatcctctaatgcggatcgagaaagatctcgatgagacgaaatccaccctgcatcaa
actatcgacagtatactggagcgcggcgtcaagctcgatcagttggtggacaagagtaac
gatctttcattgcagagcaagatgttttatcgcacggcacggaaacagaatagctgttgc
aacctgtcgtag
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