Cyanidioschyzon merolae: CYME_CML202C
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Entry
CYME_CML202C CDS
T00175
Name
(RefSeq) similar to SR family splicing factor SC35
KO
K12891
serine/arginine-rich splicing factor 2/8
Organism
cme
Cyanidioschyzon merolae
Pathway
cme03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cme00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CYME_CML202C
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cme03041
]
CYME_CML202C
Spliceosome [BR:
cme03041
]
Common components
Common spliceosomal components
SR proteins
CYME_CML202C
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RNA_bind
Motif
Other DBs
NCBI-GeneID:
16994624
NCBI-ProteinID:
XP_005536836
UniProt:
M1V5J9
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All DBs
Position
12:509989..510573
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AA seq
194 aa
AA seq
DB search
MSGNEALSSAPPSSTGDGAHGGDSLSHTAKDSPSGATLIGETTEQGAAKPKSSRPFPNRP
SESELQNSVGLMVRNIPFGTRQEDLLELFRPYGDVIDIFIPWDRQLRRIRGFAFVRLQTL
EQAEAAIAALDGSTMRERIIAVKRAEYERGEGPVSQHAGASDGRRGQSRRPRRSDGRSTR
RRRPRSRSFEGGNT
NT seq
585 nt
NT seq
+upstream
nt +downstream
nt
atgagtggtaacgaggcactttcgtcagctccaccgagctcgacaggcgacggtgcccac
gggggagactccctcagccacactgcaaaggattccccgagcggagcgaccttaatagga
gaaacgacagagcagggcgccgcgaaacccaaatcaagtaggccgttcccgaatagaccg
agcgaaagtgagctgcaaaactccgtaggcctcatggtgcgaaatattccctttggaacg
agacaggaggacttactcgagctctttcgcccatatggtgatgtcatagacatattcatt
ccctgggatcgacagcttaggcggatccgcggtttcgctttcgttcggttgcaaacgctc
gaacaagcggaggcagcgatcgcggcgttagacggatccaccatgcgtgagcgcatcatt
gcggtgaaacgagccgagtacgagcgcggtgagggcccggtctcacaacacgctggggcc
agtgacggtcgaaggggacaaagtagacgccccaggagaagtgacggaagaagcacccgt
cggcgtagaccgaggtcacgtagttttgaaggcgggaatacgtaa
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