Cyanidioschyzon merolae: CYME_CML315C
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Entry
CYME_CML315C CDS
T00175
Name
(RefSeq) similar to transcription factor DP-1
KO
K04683
transcription factor Dp-1
Organism
cme
Cyanidioschyzon merolae
Pathway
cme03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
cme00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
CYME_CML315C
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cme03000
]
CYME_CML315C
03036 Chromosome and associated proteins [BR:
cme03036
]
CYME_CML315C
Transcription factors [BR:
cme03000
]
Eukaryotic type
Helix-turn-helix
Fork head/winged helix cell cycle-controlling factors, DP
CYME_CML315C
Chromosome and associated proteins [BR:
cme03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
CYME_CML315C
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
E2F_TDP
DP
YcbB
Motif
Other DBs
NCBI-GeneID:
16994719
NCBI-ProteinID:
XP_005536921
UniProt:
M1V5L6
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Position
12:complement(800177..800935)
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AA seq
252 aa
AA seq
DB search
MRSGRPREEKGLRHFAVRICHKVEQKGETTYNEVADELVAELLQGNNGVALRDPASEEKN
VRRRVYDALNVLCAIGVVHKDRRAVRWHGLPRASVREQSLLENELSRLSSSVRDKDGRIQ
RYRTIVRALERLVQRNMRGAAVASSGRPRSASLQGDSAVRLPFLLIATDPDAAVDIDGDE
PGSDRCSFTFNRPFQVYDADGVLLELDAMICNSGARQDSASVPATTNCALGSNEASASTS
ASATAAASEPPL
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
atgaggtccgggcggccccgtgaggaaaaaggcctccgtcactttgccgttcgtatttgc
cacaaagtcgagcagaaaggcgagaccacctacaatgaggtcgcggatgagctggtcgcc
gaactgctgcagggaaacaatggcgtagcgttgcgtgatccggcgagtgaagagaagaat
gtgcgccgtcgagtctacgatgcgctgaatgtgctgtgtgctatcggcgtggtgcacaaa
gatcgtcgcgctgtccgctggcatggtctacctcgcgccagcgtacgagagcagtctctc
ctcgagaacgaactgagccgtctgagttcgagtgtgcgggacaaggacggccggatccag
cgataccgcacaattgtacgagcgctcgagcgccttgtccaacgcaatatgcgcggtgcg
gcggtggcgagcagcgggcgcccgcgctccgcgtcgctacaaggcgattcggctgttcgg
ctgccgttcctgctgatcgccaccgatccggatgcagcagtcgatatcgacggagacgaa
ccaggttcagatcgctgcagcttcaccttcaatcgcccgttccaggtgtatgacgcggac
ggcgtcttactggagctggacgcgatgatctgcaactcgggtgccagacaggatagcgcg
tcggtgcccgcgactaccaactgtgccttgggttcgaatgaggcatcggcatcaacatcg
gcatcggcgacagcagcagccagcgagcctccgctatga
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