Cyanidioschyzon merolae: CYME_CMM076C
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Entry
CYME_CMM076C CDS
T00175
Name
(RefSeq) probable cryptochrome
KO
K12118
cryptochrome 1
Organism
cme
Cyanidioschyzon merolae
Pathway
cme04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
cme00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
CYME_CMM076C
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-GeneID:
16995097
NCBI-ProteinID:
XP_005536993
UniProt:
M1VDQ4
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Position
13:complement(169671..173348)
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AA seq
1225 aa
AA seq
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MSSSRRPSVVWYRGHDLRVEDMPALLAAVQRGGPVVPVFIWAPEEDGMWCLGRPARWWLS
RSIVALDRRLRELGCETGLILRRAKSESGGGGGVETTLLEVVKRCGAEAVYWNRVYDPVV
LRRDEEVRRRWSKHHRLAVESFKAELLVEPWEVCATESRPASFGDRPLDTFHEFMSAWMA
MPPPPEPLPAPKRIEPLIASQSGDQGPLFAVPESTMQPSDVLQSPGGEDTDTEMGIWWNQ
IHNLGSLEEYWRPGVDCVAERLQDFLTSVFPTYGDARRRQRLRNGTSRLSPYLRFGELSP
RRLYHAVRASVLQSEPSDAIIRAARTLLRNLCLREYAYHMLFYRPSILDRPLVPEFDHFP
CTKEDVGRLLEVWLSGRTGYPLVDAAMRELHHTGWLHSNLRFLVASFFTKYLLLPWQIGA
RCLFKLFIDGDLASNAICWQWVTGCNYDVFPLNCLVNPVVMGMRVDPEGEYVRTWCPELQ
QIPSSYIHAVWKCPPTILHQARVELGVTYPRPVVENRVARRRARDALRYLRQVVLNKRGY
GVRVPNTLSLKGTQELMSDWPIDEVYNVLDSKQEDLFGLSDLGHELPSGRQPERPMRDSD
ASIDDQEIAGDSIGGDHVGLLPRVWSMSQDDPLHNVFDLGGSASGANGAQLAGPSPGLGG
SNGYAQGPGGGNGGSSLMYGVSAGTFGNQQMALVSSGMGMGSSGVGGGGGGGGGGSDRSI
PEVVVGAPSSVDEDSYTEKLHRVDSFHALLSAGATTPLARGSIMEPTGRVPGTNPDFMRA
PPTEHLSSLSGIVAPNASHPSSAVHVSTSGSRSLVTAGGAAAALSPGQMMRTPNAAVDPG
TTSASPLLLHHTGGAGHGRGSSRGTATLPGSQSQPMGTRSMLNANLPGSVFAFESGEPGA
MPRPAPGHSLGPETSVSAPASWALINERPSLSAAEDASVHRRPGAMPASTSTRYDNGEAA
RYLEDRAGRKRALADEGVCTNPDLTMPERFPAVAAARVTQRLEHDTAGSVSSAAKTKRRA
SGAAAAPQAPAQQRTRDGSAPNEAPAPGSSALHHDATRAPAGSRWLEQGASGESLDVRSS
SASSDRTAPITLEGLGDVEPPQTRSERLELLERIHRSDNAYARFAGFLLQHYDITENVRR
NPKSTDFVRLRNLKDHFNRYSAPPRAGQGAAHREPLRIYRIKQFFSKILNLEVTGEWDRH
AHGGVRGPYVYGLVLRADALQRAAP
NT seq
3678 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcgtcgagacgaccttcggttgtgtggtaccgcggccacgacctccgtgttgag
gacatgccagcgttgcttgctgccgtgcagcgcggaggcccggtggtgccggtgttcatc
tgggcacccgaagaggacggtatgtggtgtctcggccgaccggcacgttggtggttgagt
cgttccattgttgcacttgaccgacgacttcgggagctaggttgcgaaaccgggttaatt
ctgaggcgtgcgaagtcggaaagcggcggcggcggcggcgtcgagacgacgcttctggag
gtcgtgaaacgctgcggtgccgaggctgtgtactggaatcgggtctacgaccctgttgtg
ttacgcagagatgaggaagtgcggcggcgatggtcgaagcaccaccgcctggctgttgag
tccttcaaggcggagctcctggtcgagccgtgggaggtttgtgcaacagagagcaggccc
gcgagctttggggaccgtccgctcgacaccttccacgagttcatgtcagcgtggatggct
atgccaccacccccagagccgttgcctgcacctaagcgaatagagccgctcattgcctcc
cagtcgggagatcaggggcctctgttcgctgtgcccgagtccacgatgcaaccgtcggat
gtgctgcagtcgcccggcggcgaggataccgacactgaaatgggaatttggtggaaccag
atacacaacttaggcagccttgaggagtactggcgccccggcgtggattgtgtagcagag
cgcctgcaagacttcttgacgagtgtctttccgacgtatggggacgctcgaagacgacag
cgtctccgaaacgggacatcacggctttcgccgtacctacggttcggagaattgtcaccg
cggcgcctctaccacgctgttcgggcgtctgtactgcagtctgagccatcagatgcaata
attcgggctgctcgaacgctcctgagaaacctctgcctccgcgagtacgcttatcatatg
ctattttaccgaccatcgatcctggatagaccactggtgccagaatttgatcattttcca
tgcaccaaggaagatgtgggccgtctcctcgaggtgtggctctcgggacgcacgggctac
ccactcgttgatgcggcaatgcgggaactgcaccacaccggctggttgcattcgaatctg
cggtttcttgtagcttctttttttaccaagtaccttctcctgccgtggcagatcggggct
cgttgcctcttcaaactattcatcgatggcgatctggcgagcaacgcgatctgctggcag
tgggtgacgggctgcaactacgacgttttccccttgaattgcctcgtgaacccagtcgtg
atgggcatgcgcgtagaccccgagggtgagtacgtgcgtacctggtgtccagagttgcaa
cagatccccagtagctacatccatgcggtgtggaaatgccctccgacgattctgcatcag
gctagggttgaactgggtgtcacctatccgcgaccggttgtcgagaatcgggtagcacgt
cgccgagcccgggacgcgcttcgataccttcgccaagttgtgctgaacaagcgcggctac
ggtgtgcgggtcccgaatacgctatcgctgaaggggactcaggaactcatgagcgattgg
cccattgatgaggtctacaacgtgttggattctaaacaggaagacctcttcgggctgagc
gatcttggtcacgaactacctagcggaaggcagcctgagcgtcccatgcgagatagcgac
gccagcatcgatgatcaggaaatagctggtgattcgatcggaggcgatcatgttggactg
ctcccacgggtctggtccatgagccaagacgatccgctgcacaacgtttttgatctgggc
ggcagtgcgagcggggcgaatggcgcgcagctggcggggccttccccgggtcttggcggc
agtaacggttacgctcagggaccaggtggcggaaacggaggctcctctttgatgtacggt
gtgagtgcgggcacatttgggaaccaacaaatggcgcttgtttcgagcggcatgggcatg
ggcagcagcggcgttggtggtggcggcggcggcggcggcggcggctccgaccgcagcata
cccgaggtcgtcgtgggagctccaagtagcgtggatgaagattcctacaccgagaaactg
caccgcgtcgattcgtttcatgcactcttgtctgctggtgcaaccacgccacttgcacgc
ggctcgatcatggagcccactggacgagtcccgggaacaaatcctgactttatgcgcgcg
cctccgacggagcatctcagtagcctgagcggcattgtagcgccaaacgccagtcatccg
tcgtccgcggtgcatgtgtcgacgtcgggaagccgatcgcttgtgacggctggtggagcg
gcggcagccctgtcacccggccagatgatgcgcacgcccaacgcggcggttgatccaggt
accacgagcgcatcgccgctgttgctgcaccatactggtggggcgggccacggtcgaggc
agttcacgaggcaccgccacgttaccggggtcacagtcgcagccgatgggtactcgatcg
atgctgaacgccaacctgcccgggtctgtttttgcgttcgagtccggagaaccgggcgcc
atgcctcgcccagcaccgggtcattcgctgggacccgaaaccagcgtttccgcacctgcc
tcgtgggcgcttatcaatgagcgtccgtcgttgtcggcagctgaggatgcgagcgtgcac
cggcgacccggcgcgatgccggcatcgacctcgactcggtacgataatggcgaagctgcg
cggtatctagaggacagagctggacggaaacgtgcactagctgacgaaggcgtttgcacc
aaccctgacttgacgatgccagagaggttccccgcggtggctgccgcgcgagttacgcag
cgcttagaacatgatacagcgggcagcgtatcatctgcagcgaaaaccaagcgaagagcg
tccggtgctgcagccgcaccgcaagcaccggcccagcagcgaacgcgcgatggatccgcc
ccgaatgaggctcctgctcccggatccagcgccttgcaccatgacgcaacgcgtgccccc
gctggaagccgctggctcgagcaaggcgccagtggcgaaagtctcgacgtgcgctcttcg
tcggcctcgagcgaccgcacagcaccgatcacccttgagggtctgggagacgtcgagccg
ccccagacccggagcgaacgactcgaactgctggagcgcatccaccggagcgataacgcg
tacgcccgattcgcgggtttccttctccagcactacgatatcacagagaatgtgcgccga
aaccccaagagcacggatttcgtacgtttacggaatctcaaagaccacttcaatcgatac
agtgcaccaccacgggctggtcaaggtgccgctcatcgggagccgctcagaatttaccga
atcaaacaatttttcagcaaaatactgaacctggaggtcaccggcgagtgggatcgacac
gcacacggcggagtgcgcggcccgtacgtgtacggcctggtgctgcgcgcggatgcgcta
cagcgtgccgcgccctga
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