Cyanidioschyzon merolae: CYME_CMM150C
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Entry
CYME_CMM150C CDS
T00175
Name
(RefSeq) similar to I kappa B kinase complex-associated protein
KO
K11373
elongator complex protein 1
Organism
cme
Cyanidioschyzon merolae
Brite
KEGG Orthology (KO) [BR:
cme00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cme03016
]
CYME_CMM150C
Transfer RNA biogenesis [BR:
cme03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
CYME_CMM150C
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Beta-prop_ELP1_1st
HB_ELP1
Beta-prop_ELP1_2nd
A-sol_ELP1
ANAPC4_WD40
TPR_GEMI5
Beta-prop_WDR19_1st
WD40_CDC20-Fz
SR-25
RTP1_C1
Motif
Other DBs
NCBI-GeneID:
16994851
NCBI-ProteinID:
XP_005537043
UniProt:
M1VDT5
LinkDB
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Position
13:complement(345748..349347)
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AA seq
1199 aa
AA seq
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MENLGVEEVDLIELRDSIQCSARGKHQNQCWRLLRRASEPCVTAAVLDAERLRVALCELH
VLSGTRSSRDLPLSTDVQNASLLGIFWSTALAQFVAALTSGHLIAENEPVGLVPEGLLAV
EASPSQDVVVLVSTRGELLLMDAELNVIERGTLSEPLSPGLSWPTAEDSHIIRVAWRSDG
NLFAVSYPGQDQRVHVDIFRSPSLRREATAHTEPLVAKPTDAQRTPPALDLVLCWEQRPG
GMLTVATRDGDVVFFERNGLRHTRMDMHRKLTSKRRIWGLSWNANDMLLAIGYTNLATDA
PDSCSRKRIDLYSFRNYHWYLKYRLELGSSDFADNDHVWMAFDFTDPLLLYVYSGTWASP
HERMLRLYRLQWTISLNAERDDTLAVIDGHRVLLTPLRRCVLPPPLYAFDACIPANEADD
TIQYVLWEKDSLFAISSLGRWYWLRRDGALVAVQAPIPAVADAAAKQVPARDELVWNPEL
GMFMIHPIRSISLAGGRLLYRRRSRLLQWQPSNESSTEPARTISTDCLSVAVVSSENLIF
WTTPSGSLRYHELGIELDAAAERRYRTESERVVDRGAILVAALGDALRLVIEAPRGNLET
ITPKICVERKIRRVLRSALDANQKPDMIALLQLARKHCIEPRFVVEAYGPKRLADDTDWF
LQQILNAWSEAHVAEILTQLIVSLNEKEDVYRHLVAGFVAQMHAVDPERFFQAILTAYIT
QRPQADIDAALKLVSKRFSAESLRYISTIARKPIQELYRAALGIYDLDLAAKIAVAGRMD
RNLHEPFLESLRQVTPEALRRYEIDMFLTRPRAALGHLLEARKVLGPQVDEKICRLVEQF
DLHHEAYIEVEKIEHESLTQGLWHELALRWATRLENKGAHLQAAHLYAMHGALEQAAEAY
LAGGQAPLAIAAYLQKDHLIGNEHDFVSFLRRLVETLCNQCQWEVAAQILAGSPLAQPEE
ALQLLLDAHRFQAALRLLTTQGRGDWLRERLRPAVISAAEERTTEIRTSAAKYHERAVRL
QLVREHRQQLQLRSTGDFKNPNVVTGADTDSEVDAIASEIASMSTFTFGTHSARSKSSSS
SSSNSSNIHSGMAASERSAAGKATAKTRKKTKRKIKPGDPHEELFLVEYLRRLEPTPALR
ETVQEIAECLLICGEYRLVTALQRAVKELDETIANWKRTLGVVPERPLSPSTPNGISTY
NT seq
3600 nt
NT seq
+upstream
nt +downstream
nt
atggagaaccttggcgtggaggaggtcgatctcatagagttgcgagactcgattcaatgc
tctgcacgaggtaagcaccagaaccagtgttggcgactgttgcgacgagcctccgagccc
tgcgtgactgctgcggtacttgacgctgagcgactgcgtgttgcgctctgcgagctccac
gtactgtcgggcacgagatcttcacgagatctccctctgagtactgatgtgcagaacgcg
tcattattgggtattttctggagcaccgctctggcccagttcgtcgcggcgctgacttca
gggcacctgatcgccgagaacgagccggtcgggctcgtacccgaaggcctcctcgccgtt
gaggcgtcaccttcccaggacgtcgttgtgctggtctccacgcgaggagagctgcttctt
atggacgcagaattgaatgtcatagagcggggcacgctgtctgaacctctatcgcctggt
ttgtcgtggccgacggcggaggattcgcacatcatccgagttgcatggcgatctgatggc
aacttgttcgcagttagttatcctggacaagatcagagagttcatgtggatatctttcgc
tccccatcactccgacgagaggccacagcacataccgagcccctggttgcgaaacctacc
gatgcacaacggacgccgccggcactcgacttggtgctctgttgggagcaaaggccgggt
ggcatgctcacagtcgcaacgcgagatggcgacgtggtcttcttcgaaaggaacggtttg
cgccatacccgtatggacatgcaccgtaagctgacgagcaagcgccgcatctggggcctc
agctggaatgccaacgacatgctgctcgccattggatatacgaacttggctaccgacgca
ccagactcgtgctcccggaaacgcattgatctgtacagcttccggaactatcattggtac
ctcaaatataggttggagctggggtcctcggatttcgccgacaacgaccatgtatggatg
gcgtttgattttacggatccactgctactctacgtgtacagtggcacatgggcatccccg
catgaacgaatgcttcgcttgtacaggctgcagtggaccatttcgttgaacgctgagcgc
gacgacaccctcgcagtcatcgatggtcatcgtgtgctactgacgcctctacggcgctgt
gtgctaccgccacctctttatgcgttcgatgcatgcatccctgcgaacgaggcggacgac
acgattcaatacgtactctgggaaaaggacagtcttttcgccatcagcagtttgggccgg
tggtactggctccgcagggatggcgcattggtcgcggtgcaggctccgatacccgccgtt
gcggatgccgccgcgaagcaggtacccgcgagggacgagctcgtgtggaatcctgaactc
ggtatgttcatgattcatccgattcgatcgatttcgcttgctggaggccggctgctgtac
cggaggcggtcgcggctgctccagtggcaaccgagcaacgagtcttccactgagccagca
cggacgatcagcactgattgtttgtctgttgcggtggtgtcttcagagaatctgatattc
tggacgacaccgtccggctcgcttcgctatcacgagctgggtatcgaacttgacgctgct
gccgaacggcgataccgcaccgagtccgagcgtgttgtggatcgaggagcgatcctggtt
gcggcactcggagacgccttgcggctcgtgatcgaagcaccacgcggcaatctggagacg
atcaccccgaagatatgtgtggagcggaagatccgtcgggtgctgcgtagcgcgctggac
gcaaaccagaagccggacatgatcgctctgctgcagctcgctcgcaaacactgcatagag
ccgcgattcgttgtagaggcttacggcccgaagcgattggcagatgatacggactggttt
ctgcaacagatcctgaatgcatggagcgaggcacatgttgcggagatcctgacgcagctc
attgtgtctctgaatgaaaaggaggacgtctatcggcacctggttgccggcttcgttgcc
cagatgcatgccgtggatcccgaacgatttttccaggctattttgacggcatatattacg
cagcggccacaggcggatatcgacgctgccctgaaacttgtaagcaagcgattctcggcg
gaatccttgcgatacataagcacgattgcgcgcaagccaattcaggagttataccgagca
gcactcggtatctacgatttggacttggcagcaaagatagctgtcgcagggcgcatggac
cgcaatctgcacgagccgttcttggaatcgctgcggcaagtgacacccgaggcgctccga
cgctacgagatcgacatgtttctgacgcgaccacgagcggcactgggtcacttgctggaa
gctcgaaaggtgttgggtccgcaggttgatgaaaaaatttgtcgtttggtggaacagttc
gacctgcatcacgaggcatatattgaggtggagaaaatcgaacacgagtctctgacgcaa
ggcttgtggcatgagctggctttgcgctgggccactcgactcgagaacaagggcgcgcat
ctccaagccgcacacctctacgctatgcatggcgctctggagcaggcggctgaagcctac
ctcgcaggcgggcaggccccgttggctatcgccgcataccttcagaaggatcacctcata
gggaatgagcatgattttgtatcgtttttgcggcgcctcgtggagacattgtgcaatcag
tgtcagtgggaggtcgctgctcaaattctcgccggatcgccgctcgcgcaacccgaagaa
gcgctgcagcttcttttagatgctcatcgcttccaggctgcgttgcgcctactcacaacc
caaggccggggcgactggctgcgagaacgactccgtccggcggtgataagcgctgcggaa
gagcgtacgaccgaaatacgcacgagtgctgcgaaataccacgagcgagctgtgcgtttg
cagctagtccgcgaacaccgtcaacagctacagttgcgttccacaggcgatttcaagaat
ccgaacgtggtaacgggtgctgatacggacagcgaagtcgatgcgatcgcttcggagatt
gcgagcatgtcgacattcacttttggcacgcattcagctcggagcaaaagcagcagcagc
agcagcagcaatagcagcaacatacattcgggtatggcggcctctgagcggtctgccgca
ggcaaagcaaccgccaagacccgcaagaaaaccaaacggaaaatcaaaccgggtgatccc
cacgaagaattgttcttggtcgaatatctgcggcggctggagccaacaccagctctccgg
gagactgtccaggaaatcgcagagtgcctcctaatctgtggggaatatcgtttggtgaca
gcgcttcagcgcgcggtgaaagaactggacgagaccattgccaactggaaacgtacgctg
ggtgtggtaccggagcggccgctgtcgccttccacaccgaacggtatatctacttattga
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