Cyanidioschyzon merolae: CYME_CMM233C
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Entry
CYME_CMM233C CDS
T00175
Name
(RefSeq) SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily C
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
cme
Cyanidioschyzon merolae
Pathway
cme03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cme00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
CYME_CMM233C
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cme03021
]
CYME_CMM233C
03036 Chromosome and associated proteins [BR:
cme03036
]
CYME_CMM233C
Transcription machinery [BR:
cme03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
CYME_CMM233C
Chromosome and associated proteins [BR:
cme03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
CYME_CMM233C
PBAF complex
CYME_CMM233C
GBAF(ncBAF) complex
CYME_CMM233C
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM
SWIRM-assoc_2
SWIRM-assoc_1
Myb_DNA-binding
ZZ
Myb_DNA-bind_6
Myb_DNA-bind_7
Motif
Other DBs
NCBI-GeneID:
16994946
NCBI-ProteinID:
XP_005537110
UniProt:
M1V8Z1
LinkDB
All DBs
Position
13:complement(575141..578308)
Genome browser
AA seq
1055 aa
AA seq
DB search
MVPPRKRRSRTAREQQGNGTHIPDGNKSTSTPSEEVRTGAAADAREDTAFPSAEGQRPAD
SRRKRVKSCNISMKDYEDPHQIAKFEAISAQLNAESPEQLGFRPGDSVDVSPRALSLLTG
NLLQFQERVLGRNSVEPPEIRGFMTKLPNRLFHDYSAHGSLRTIIECCFRFRVARGIRRF
DLHKPDMTGVFLEMLQEVERELIKRKQLQMPRLFFAPALGSAEIDRLSAIARKHGASVVS
SPREATHIVYPDPPGTTEAETEAEDYCVSLKRKGNQVLTHWWYFPDSYDSWIPAQEVEDP
DGELHGEEENLSGVIEGKIWHVQKRFLEDCEKFNEWCNENDYEVIPEEEKLNVDEWKPPS
ASRIDGHLRGSESKTAAPTPSKRKSAEPSPVKPEPDGTPERVTVRAVREESAEPMKIKVR
LAPPIASQDAGSSSNAPAEQVPAPNIAGPITFTTETCAAVDAEQPSAAAGAAPRISRPTV
RPLVPDDATLRMRNVTASSRDEQLQKRLAQQREALRERRKERNDAAAAEEDALPGPAAHA
PRDRESLAPRRVAEALGGLAERETLPAAAAATAIGEKSPIRVPAHSRWFRIDAIHDIERR
ALPEFFSGKFASKTPEVYMLYRNFMIDTWRQDPTRYLTGTAVRRHLAGDVGAVMRVHAFL
EQWGLINYGVAPETRPQTVSGGFSGSGATLISTSSGSLAASSAGLEGGLPRIFLFDDGSR
IPKSRMHLAPMATRRELYAAAAAIEYQCDVCGRDCSQRRYHCLLKADMDLCPECYHQGKF
PEDFNGKDFIELRPVLSLGSAASATGTLTAPSTDDWTDVEVLQLLEGIEAYGDDWDAVAQ
HVGTRSRDACITKFIRLPIEDPFLEDDLSRLAVPAVAGETVQTERNEPPLFADAGNPLMA
HIAFLANSVSPDVAAAAARAALAAIMKSDAPPEALADANAIQAVAATALGAAATRAAELA
AIEHLELHRATEQAIETQVRKLEEKMNVLEQLEEEFLREREQVEIYRKELFAERLNLVAR
REALSSTATLGASPATALNASIPEWTVARDTRKQC
NT seq
3168 nt
NT seq
+upstream
nt +downstream
nt
atggttcccccgcggaagagacgctcccgcaccgcgcgagagcagcaaggcaacggaaca
cacatcccggacgggaacaagtcgacgtctaccccgtctgaagaagtgcgcacaggagct
gcagcggatgcgcgggaagacactgcttttccgtcagctgaaggtcagagacctgcggat
tcgcggcggaagcgggtaaagtcctgtaatatatccatgaaagactacgaggatcctcat
caaattgcgaagttcgaggcaatctcggcacagctaaacgctgaatcgccggaacaactg
gggtttcgacccggtgactctgtggacgtctccccgcgcgcgctgagcctcctgaccggt
aacctgcttcagtttcaagagcgggttctcggacggaactccgtcgagccgccagaaatt
cggggtttcatgacgaaactgccgaatcgtctctttcacgactactcggcacacggctca
ttgcgtacaattatcgaatgctgttttcggttcagggttgctcgtggaatacggcgtttt
gatctccacaaacccgatatgactggagtttttttagagatgctccaagaagttgagcgg
gaactgataaaacggaaacagctccagatgccgcggttgtttttcgcaccggcattgggt
tcggcggagattgaccgcctcagcgccattgcaaggaagcatggtgcgtccgtcgtttcg
tcgcctcgcgaggcaacacatattgtgtaccccgatccacccggcacgacagaggctgag
accgaggcagaggactactgcgtgagtctgaaaaggaaagggaatcaagtactgacgcac
tggtggtactttcccgattcgtacgattcatggattcccgctcaggaggtagaagatccc
gacggcgaactgcacggagaggaggagaatctctccggagtgattgagggcaaaatatgg
catgtgcagaaaagatttctcgaggattgcgaaaagttcaatgagtggtgcaatgaaaac
gactatgaggtaatacccgaagaggagaagctcaatgtcgatgagtggaaaccgccatcg
gcctcgcgcatcgatggccacctgcgaggatccgagtcgaagaccgcagcaccgacgccg
tcgaaacgaaaatccgctgaaccgagtcccgtgaagccggagccagacggcacgccagaa
cgggtgacggtgcgcgccgtccgagaggaatccgcagagccgatgaagatcaaggttcgc
ttggcaccgccgatagcgagccaggacgcgggaagctcgagcaatgcacccgcggagcaa
gttccggcaccgaatattgctggcccgatcacgttcacaacggagacttgcgctgcggtc
gatgcggagcagccaagcgctgcggccggcgctgcaccgcgcatttcacgcccaacggtg
cgtccgctagttccagatgacgcgacactgcgcatgcgcaatgtaactgcatcttcgcgg
gatgagcagctacagaagaggttagcacagcagcgagaagcattacgcgaacgacgaaaa
gagcggaatgacgctgcggcagccgaagaggatgcgcttccggggccggcagcacacgcg
ccacgtgatcgagaatcgcttgcaccgcgtcgcgtcgccgaggcactcggtggcctcgcg
gagcgggaaacgcttccggctgcggctgctgccacggcgattggtgaaaagtcgccgatt
cgtgttcccgcgcacagccgatggtttcgcatcgatgcgattcacgacattgagcgacgc
gcgttgccggagtttttctctgggaaatttgcttcgaaaacgcccgaagtatacatgctt
taccgaaattttatgattgacacgtggcggcaggatccgacccgctacctaacaggcaca
gctgttcggaggcatctcgctggcgatgtgggtgccgtcatgcgtgtgcacgcctttctg
gagcagtggggcctgattaactacggagtggcacccgagacgcgcccacagactgttagc
ggcgggttttcgggttccggtgcgacgcttatctccaccagctcgggaagcctggcagca
agctcagctggtcttgagggcggacttcctcgcatattcttgtttgacgacgggtcgcgt
attccgaaatcgcgcatgcatctggcgcccatggcaacgcgccgtgaattatatgccgca
gcggcagccattgagtaccagtgtgacgtgtgcgggagagactgctcccaacgccggtac
cactgtttgctcaaggccgatatggacctgtgccccgaatgctaccatcagggcaagttt
cccgaggacttcaatggaaaagatttcatcgaattaagacctgttctatcgctggggtcg
gcggctagcgccactggaaccctcacagctccgagcacggacgactggactgatgttgag
gtgctgcagcttctcgaaggaatcgaggcatacggtgatgactgggatgcggttgctcag
cacgttggcactcgttcccgcgatgcgtgcatcaccaaattcattcgtctacccattgaa
gatccgtttctcgaggatgatttgagtcgtttagcggtacccgctgtagctggcgagacg
gtgcagaccgaacgaaacgagccgccgctcttcgccgacgccggaaaccccttgatggcg
catattgcgtttctcgcgaacagcgtctcgccggatgtcgctgctgctgctgcccgggcc
gcgttggcagcgatcatgaaaagcgacgcaccaccggaagcgcttgcggatgcgaatgca
atccaggccgttgcggcaacggcgcttggcgctgcggccactcgggccgcggagctcgcc
gccattgagcatctagagctgcaccgggctactgaacaggcgatcgagactcaggtgagg
aaactcgaagaaaagatgaacgtacttgagcagctcgaagaggagttccttcgggagcgg
gagcaggtagagatttaccggaaggagcttttcgcagagcgcttgaatttagttgcacga
cgcgaggcgctctcgagcacggcgactctgggcgcatccccggcgacggcgttgaatgcc
tcgatcccggaatggaccgtggcgcgagatactcgcaaacaatgctga
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integrated database retrieval system
