Cyanidioschyzon merolae: CYME_CMN125C
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Entry
CYME_CMN125C CDS
T00175
Name
(RefSeq) 40S ribosomal protein S27A, ubiquitin fusion protein
KO
K02977
ubiquitin-small subunit ribosomal protein S27Ae
Organism
cme
Cyanidioschyzon merolae
Pathway
cme03010
Ribosome
cme04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
cme00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
CYME_CMN125C
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
CYME_CMN125C
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
cme03011
]
CYME_CMN125C
04121 Ubiquitin system [BR:
cme04121
]
CYME_CMN125C
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cme04147
]
CYME_CMN125C
Ribosome [BR:
cme03011
]
Ribosomal proteins
Eukaryotes
Small subunit
CYME_CMN125C
Archaea
CYME_CMN125C
Ubiquitin system [BR:
cme04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
CYME_CMN125C
Exosome [BR:
cme04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
CYME_CMN125C
Exosomal proteins of colorectal cancer cells
CYME_CMN125C
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribosomal_S27
IBR
VCIP135_N
Motif
Other DBs
NCBI-GeneID:
16995355
NCBI-ProteinID:
XP_005537273
UniProt:
M1VEB6
LinkDB
All DBs
Position
14:326455..326925
Genome browser
AA seq
156 aa
AA seq
DB search
MRRQLLVQCPNGRIVSTNVLATDSLAVVLSRVTGLDADAVYGTVAGGRPVATLRDALVNF
TDPEAPIVIQAHVRVLGGGKKRKKKTYTTPKKIKHKHKKVKLATLKYYAVDDANKVTRLR
KECPNESCGAGVFMAQHRDRIYCGKCGLTYVQEDNA
NT seq
471 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcgacagctcctcgtacagtgtccgaacggacgtatagtctccacgaatgtgttg
gcgacggactccctcgcggttgtcctgtcgcgagtcaccggtcttgacgccgacgccgtc
tacggcaccgtggctggtggccgaccagtagcgacgctacgcgacgcgctggtaaacttc
acggatccagaggcgcccatcgtgattcaagctcatgtgcgggtgcttggcggtggaaag
aaacggaagaagaagacatacactacgccgaagaagatcaaacacaagcacaagaaagtg
aaactcgctacactgaaatattacgcagtggacgatgcgaacaaggtgacccggctgcgg
aaagaatgcccaaacgagagctgtggggcaggcgtttttatggctcaacatcgggaccgc
atctactgtggaaaatgcggacttacctacgtccaggaggacaacgcgtaa
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