Cyanidioschyzon merolae: CYME_CMN178C
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Entry
CYME_CMN178C CDS
T00175
Name
(RefSeq) serine--tRNA ligase, cytoplasmic
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
cme
Cyanidioschyzon merolae
Pathway
cme00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
cme00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
CYME_CMN178C
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
cme01007
]
CYME_CMN178C
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cme03016
]
CYME_CMN178C
Enzymes [BR:
cme01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
CYME_CMN178C
Amino acid related enzymes [BR:
cme01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
CYME_CMN178C
Transfer RNA biogenesis [BR:
cme03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
CYME_CMN178C
Prokaryotic type
CYME_CMN178C
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
GAS
FlgK_D1
APG6_N
Motif
Other DBs
NCBI-GeneID:
16995416
NCBI-ProteinID:
XP_005537319
UniProt:
M1VJ63
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All DBs
Position
14:complement(448758..450188)
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AA seq
476 aa
AA seq
DB search
MLDIRLFRAEQGGNPELVRESQRRRFADVKLVDRVIELDERWRQAQFRVDALRRELNESS
KRVSGLIKSGADASELISSVADLKRSIPAAEREAAALEQERDALLREIGNLVHESVPVSV
DEADNRVERLWGYPELADERVKNAHRSHVELLLALGAADYERGARVAGSRGYFLIGPGVR
LNLALVQYALNFLRERGFREMQPPYFMTSDAMARCAQLSDFDEQLYKVTVRSRGAAAGEP
ESSGTGGTNATAAAAEDDKYYLIATSEQPICAYHTDEWLDPSTLPLLYAGFSTCFRKEAG
AHGRDQLGIFRVHQFEKIEQFAVTSPLDGASWEMLERLLGNAEEFYQSLGIPYRIVSIVS
GALNNAASKKYDLEGWYPASKAWRELVSCSNCTDYQSRRLLTRYGMKKGGDREKRFVHML
NSTLCATTRVICCIVENYQRENGVEVPAVLQPYLGGETLLPFVNLPQKGSLADQSG
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgttagacattcgtctttttcgtgcggaacagggtggcaatcccgagctggttcgagag
tcgcagcgccgtcggtttgcggacgtgaagctcgtggatcgcgtcattgagttggacgag
cgctggaggcaggcccagtttcgggtggacgcgctcaggcgcgaactgaacgagtcctcg
aaacgggtaagtggcctcatcaagtctggtgcagatgcgagcgagctcatctcgtctgta
gcggacttgaagcgttctataccagcggcggaacgagaggccgctgctctagagcaggag
cgggatgctttactgcgtgagatcggtaaccttgtgcatgaaagtgtgcctgtttctgtg
gacgaggcggacaatcgagtcgagcgtctctggggctatccagaactcgctgatgaacgc
gtgaagaacgcacaccgtagccacgtagagctcctgttggcactcggcgctgcagactac
gagcgcggagctcgcgttgccggaagccggggctactttctgataggccctggcgttcgc
ctcaacctcgcgcttgtgcagtatgcgttgaactttttacgagaacgcggctttcgtgaa
atgcaaccaccatattttatgacaagtgatgcgatggcacgctgtgcgcagctctctgac
tttgacgagcagttgtacaaggtgaccgttcgctctcgcggagccgcagcgggcgaacca
gaaagctccggaactggcggcacgaatgcaacggcagccgcggccgaagacgacaaatac
tatctgatcgcgacctcggagcagccaatttgtgcctaccacactgacgagtggctggat
ccgtcgacattgccactattgtacgcagggttttcgacctgtttccggaaagaggccggc
gctcatggacgcgaccagctgggaattttccgagtgcatcagtttgagaaaatagaacag
tttgcggtgacatctccactggacggggcctcttgggagatgctcgaacgcctcctgggg
aacgcggaagagttctaccaatccctgggaataccataccgaatcgtgagcattgtcagt
ggagcgcttaataacgccgcttcgaaaaagtacgatctcgagggttggtaccctgccagc
aaggcgtggcgcgagctcgtcagctgctcgaactgcacggattaccagtctcgtaggctg
ctcactcgttacggtatgaaaaagggcggtgaccgcgaaaagaggtttgtgcacatgctg
aacagcactctgtgcgcgaccaccagagtaatatgctgtattgtggaaaattatcagcga
gagaacggggtggaggttccggcagtcctgcaaccgtaccttggtggcgagacgttgctg
ccgtttgtcaatttgccacagaaaggctcacttgccgaccagtcaggctga
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