Cyanidioschyzon merolae: CYME_CMN268C
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Entry
CYME_CMN268C CDS
T00175
Name
(RefSeq) probable carotenoid cis-trans isomerase, CrtH
KO
K09835
prolycopene isomerase [EC:
5.2.1.13
]
Organism
cme
Cyanidioschyzon merolae
Pathway
cme00906
Carotenoid biosynthesis
cme01100
Metabolic pathways
cme01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
cme00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
CYME_CMN268C
Enzymes [BR:
cme01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.13 prolycopene isomerase
CYME_CMN268C
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GFIT
Motif
Pfam:
Amino_oxidase
NAD_binding_8
DAO
FAD_binding_2
FAD_oxidored
Thi4
Pyr_redox_2
FAD_binding_3
HI0933_like
Pyr_redox
GIDA
MtrD
Motif
Other DBs
NCBI-GeneID:
16995220
NCBI-ProteinID:
XP_005537386
UniProt:
M1V5V9
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Position
14:661781..664147
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AA seq
788 aa
AA seq
DB search
MSKHRGRDQKREPQEPQRLLQMHQSYAQLWSPPLPRVTELRSAGPATPPRVYVAARSTSM
PAAHDRGYAFLTSWSPSLSHLRRFTPQRGWRQPTRRFQRTCSGAGRQYQTARQRPERHGA
PQLSANVDDGAAAVATAAPEIRTAFDALVIGSGIGGLVTATQLAQRGAKVAVFERYLIPG
GSAGFFRRGGYTFDVGASMIFGLGEQPGSTNLLTKALAAVGEHLETIPDPVQIHYHCPDP
VLQHLLVYRDEKRWLQALTERFPAEKEGIHRFYGECWQVFRALNALELRSLEEPRYLLRV
FRQNPGACFTLLRYLGVNVGTIARRHIRDETLLRFIDIDCYVWSVMPADRTPMINAGMVF
CDRHYGGVNYPRGGVGQIAQRLAAGLERCFPGCKVFYGARVTEIEMMSDPSAPGGKRAVG
VRLADGRRFRARAIISNATRWDTFGLEPETVQEVASATTAAHASLPVAAAVVADTPTRGS
VADNSGTVLEALLPQKSRSYEPAVSPEFSSPTTTVSSHDRKTGEHFRAAAAVSGAGAQEF
RPGRRALVNAEHVPEIERLWSQLYVKAPSFLSVHIGVRRDALSNKDGNLEDCHHIILERW
EDMETAHGALGTLFVSIPTVLDQSVAPEGRHIFHVFTPSWMEEWKHLSPTAYREQKERYA
ARLLERLEPHFPGLAAGIEEMHVGTPRTHRRFLGRQDGTYGPMTHRLLQGLFTMPFNCTA
VRGLYCVGDSSFPGQGLNAVAFSGFAAAHRVAADLGLEPRLPKFIDDWLVDLIAIKRVNW
FSRRMLRT
NT seq
2367 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagcatcgtggacgggatcaaaaacgtgagcctcaagagccgcaacggctgctg
cagatgcaccagagctatgcgcagctttggtcgcctcctttgcccagagtgactgaactg
cggtctgcggggccagcaacaccgcctcgggtatacgttgcagctcggagcacttcaatg
cctgcagctcacgatagaggttatgcttttttgacgtcatggtcaccgagtctatctcat
ctaaggcggttcacgcctcagcgaggctggagacagcccacacgtcgtttccaacggact
tgctccggggctgggcgccagtaccagaccgctcgtcagcgtcctgagcggcacggagca
ccacagctgagcgctaacgtagacgatggagcagctgcagttgctactgcagctccggag
atacgcacagcttttgacgcactcgtcataggttccgggattggtggactggtcacagcg
acgcagctggcccagagaggcgccaaagtcgctgtatttgagcgttatttgattccagga
ggctccgctggtttttttcggcgcggtggctacactttcgacgtgggagcatccatgatc
tttggcctcggagaacagcctggctccacgaacctgctaactaaggcactcgctgcagtt
ggcgaacacctggaaaccatccccgacccggtacagattcattaccattgccctgatcct
gtgctgcaacatctccttgtctatcgagatgaaaagcgatggctgcaagcgctcacggag
cgctttcctgcagaaaaagaggggattcatcgtttctacggcgagtgctggcaagtgttt
cgagcactcaatgcattggagctgcgctctctcgaggagcctcgttacctcttgcgagtt
tttcgccaaaatcctggtgcttgtttcacgctcctgcgctacctcggggtcaatgtcggt
acgatcgctcgcaggcacatccgcgatgagaccttgctccgttttatcgatattgattgt
tatgtatggtcggtgatgcccgcggatcgcaccccaatgatcaatgccggtatggtcttc
tgtgatcgccactatggaggcgtcaactaccctcgtggcggtgtaggccagattgcccag
cggcttgctgcaggtctcgagaggtgctttccaggctgcaaggtcttttacggtgctcgt
gtgaccgagatagagatgatgtcggatcctagtgctccaggtggcaaacgagcggtaggc
gttcggctcgcggatggcaggcgttttcgagccagagctattatttcgaatgcaacacgc
tgggacacgtttggccttgagccagagacggtgcaggaagtggctagtgcgaccaccgca
gcgcatgcctcgcttccggtagcagcagcggtcgttgctgacacaccaacacgcggcagc
gtcgcggacaactcgggaacggtattagaagcgctgctgcctcagaagagccgttcgtat
gaacctgccgtatcgccggaattttcatcacccacgacgacagtttcttcgcatgatcgc
aagactggagagcactttagagctgctgcagctgtttctggagcaggcgcgcaagagttt
aggccaggacgacgggcactcgtgaacgctgaacacgttccggaaatagagcgtctctgg
tcgcaactctacgtgaaagcaccttctttcctgtcggtgcatatcggcgttaggagagat
gcgctctcaaataaggatggcaacctcgaggactgccatcatatcattctggagcgctgg
gaggatatggagacagcgcatggcgcgctgggcacgctgtttgtttcgatacccacagtt
ctcgaccagagcgttgcccccgagggccgccacatctttcacgtctttacgccatcgtgg
atggaggagtggaaacatttatcgccgaccgcgtaccgggagcagaaggagcgctatgcg
gcgcgactgttggagcgtctcgagccccattttcctggacttgctgcaggcatcgaggaa
atgcatgtggggacgcctcgcacgcaccggcgttttctaggtaggcaagacggaacctac
ggtccaatgacgcatcgcctgcttcaaggcttattcacgatgcctttcaactgtactgca
gtgcgtggtctgtactgcgtcggtgatagctcgtttcccggccagggtctcaatgcggta
gcgttcagcggtttcgctgctgcgcaccgagtcgctgccgacttgggcctggagccgcgt
ttaccgaagttcattgacgattggcttgttgacttgattgcgatcaagcgcgtgaactgg
tttagtcgcagaatgcttcgcacttga
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