Cyanidioschyzon merolae: CYME_CMO135C
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Entry
CYME_CMO135C CDS
T00175
Name
(RefSeq) probable catabolite repressor protein (CCR4)-associative factor 1
KO
K12581
CCR4-NOT transcription complex subunit 7/8
Organism
cme
Cyanidioschyzon merolae
Pathway
cme03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cme00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CYME_CMO135C
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cme03019
]
CYME_CMO135C
Messenger RNA biogenesis [BR:
cme03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
CYME_CMO135C
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
CYME_CMO135C
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
Motif
Other DBs
NCBI-GeneID:
16995618
NCBI-ProteinID:
XP_005537540
UniProt:
M1V9G6
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All DBs
Position
15:341369..342337
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AA seq
322 aa
AA seq
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MAGDAARAAPQTGKERPPPRFIEVFHDNLERELDVISSLVALGKYKLVAMDAEFPGVVVR
PLGNFDSPEDFQYQTIRCNVDLLKVIQIGICLADTEGSLPTTEEAPAGNVWQFNFEFSLA
RDIYAQSSVEMLQEAGIKFDVLQERGIDPIYFGELLITSGLVMNPDVTWITFHSGYDFGY
LVKTCTADLMPATRQAFYELLSILFPNFLDIKSFMPSLQLHGGLNKLAETLRVRRHGPAH
QAASDALLTLDVFNRLARVHANFIAFDQFLNKLYGLSFPTSVDVTNTSMQAQPQNALEMN
ALLEDTDRIRSEDGSGFAKPAV
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atggcgggagatgcagcgcgtgcagctccgcaaactggtaaagagcgaccgccaccgagg
ttcatagaagttttccacgacaaccttgagcgagagcttgacgtaatttcgtcacttgtt
gcgcttggcaagtacaagttggttgccatggatgcagagttccctggcgtcgtcgtgcga
cctcttggaaactttgactcaccagaggactttcagtaccagaccattaggtgcaatgtc
gaccttttgaaggttattcaaattgggatctgcctggccgacacggagggcagtctgcca
acgacagaggaagcgcccgccggcaacgtatggcagttcaacttcgagttctctctcgca
cgtgatatctatgcacagagctccgtagagatgcttcaggaagctggaatcaagttcgac
gtgcttcaagagcgcggcatcgatccgatctattttggagagctcctgatcacatctggg
ctcgtaatgaatccggatgtaacctggattacgtttcattcaggatatgactttggttat
ctggtgaagacatgcacagcagacttgatgcccgcgacaaggcaagcgttctacgagctt
cttagcattcttttcccaaactttttggatatcaagagtttcatgccgtctctgcagctg
catggcggcctcaataaacttgcagagacgctgcgagtgcgtcgacatggccccgcacat
caagcggcaagtgatgcgctgctcacgctggatgttttcaaccgtttggcgagagtgcat
gcgaactttattgcgttcgatcaatttctcaacaaactatacgggctaagctttccgacc
agcgtagacgtgaccaacacaagcatgcaggctcagcctcagaacgcgctggagatgaat
gcgttgctggaggatacagaccgaatacgctcggaagatgggtcaggtttcgcaaagccc
gcggtctga
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