Cyanidioschyzon merolae: CYME_CMO187C
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Entry
CYME_CMO187C CDS
T00175
Name
(RefSeq) heat shock transcription factor
KO
K09419
heat shock transcription factor, other eukaryote
Organism
cme
Cyanidioschyzon merolae
Brite
KEGG Orthology (KO) [BR:
cme00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cme03000
]
CYME_CMO187C
Transcription factors [BR:
cme03000
]
Eukaryotic type
Helix-turn-helix
Heat shock factors
CYME_CMO187C
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HSF_DNA-bind
TMCO5
HAUS-augmin3
Uso1_p115_C
Motif
Other DBs
NCBI-GeneID:
16995637
NCBI-ProteinID:
XP_005537580
UniProt:
M1V9I6
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Position
15:complement(469626..470996)
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AA seq
456 aa
AA seq
DB search
MGAADITQDPSFDSKMDTDKPQTTVFIQKVYDLVQDAETADTVSWEESGESFVIWRVGDF
TEKVLPAYFKHSNMSSFVRQLNQYGFHKISHERWEFQHEFFRRDRPDLLSQIKRNRPERR
KRVLGASGTSGSSGSVNHGSAFKPVQGVRMLPGGVASKPRLDANAAYLQQHINVPLAASE
LLGEEDLATFNTSDSGNQRKPPWLSRIFGRGNRTIEIGKYGSLEDEAARLRRDNSLLLRE
LSELRRLYARLEQRLVESEQRESEREEQLHNLQGFMLRLFSSVEIMNSQLASAGLDFLAL
SPEWTQALTYLSDQGDLSNRPVPDLRQVGAISGQHIHDTDPLELLQPDSSQLENASVSNT
TSDSFGRETPQTTVADAYSSVQQSGIIDQELDALQQRMQQMYQEERAGFSTLHAFLDQQQ
TRPGRSAPEVTPSVPGLRILGEDVLLQGPTGSSETT
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgggcgctgcagacatcacacaggacccaagctttgactcaaaaatggatacggataag
cctcagaccacggtgttcatccaaaaagtgtacgatctcgtccaggatgctgagacggcg
gacactgtcagttgggaagagtctggggagtctttcgttatctggcgggtcggagacttc
accgaaaaagtgcttcctgcctatttcaaacacagcaacatgtcgtcttttgtgagacag
ttgaatcagtacgggtttcacaagatcagtcacgagcgctgggagttccagcacgagttc
ttccgacgagaccggccggaccttttgagtcagatcaagcggaaccggcccgagcgacgg
aagagggtactgggagcatctggtacgagcggctcctcgggctcggtgaaccatggcagc
gccttcaagccagtgcagggtgtgcgcatgctgcccggaggggttgcctccaaaccgcgg
ctagacgcgaacgctgcctaccttcagcagcacatcaatgtcccgttggctgcatctgag
ctgctgggcgaggaggatctggcaaccttcaacacttcggattcagggaatcagcgaaaa
ccgccatggttgagtcgcatcttcggacggggcaacagaacaatcgagattggtaagtat
ggttcgctcgaggacgaggctgctcgtcttcgccgcgacaacagcctgttattgcgagag
cttagcgaactgcgtcgtctttatgctcgccttgaacagcgactcgtcgaaagtgagcag
cgagaatctgaacgggaggaacagctccacaacctacaagggttcatgctccggctcttt
tcttccgtggagataatgaacagccagctagcatctgctggtttggactttttagccctc
agtcctgaatggacgcaagcactgacgtatctaagcgatcagggagatctctcgaaccgg
ccagtgcctgacctgcgccaggtgggtgcgatctctggccagcacatccacgacacggac
ccgctggagcttttacaacccgattcatctcaattggaaaatgcctctgttagtaatacc
accagcgactcgttcggccgggagaccccgcaaaccacagttgcagacgcgtacagctcc
gttcagcagagcggcatcatcgatcaggagctagacgcgctccaacagcgaatgcaacaa
atgtatcaagaggaacgagctggattctccaccctgcacgcgtttctcgaccagcagcaa
acgcgcccgggtcgcagtgcaccggaagtcaccccgagcgtaccaggtctgcgcatcctc
ggtgaagatgttctcctgcagggaccaaccggctcatcagaaacaacgtaa
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