Cyanidioschyzon merolae: CYME_CMO192C
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Entry
CYME_CMO192C CDS
T00175
Name
(RefSeq) hypothetical protein
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
cme
Cyanidioschyzon merolae
Brite
KEGG Orthology (KO) [BR:
cme00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cme03016
]
CYME_CMO192C
Enzymes [BR:
cme01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
CYME_CMO192C
Transfer RNA biogenesis [BR:
cme03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
CYME_CMO192C
Prokaryotic type
CYME_CMO192C
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B_4
Anti-Pycsar_Apyc1
Lactamase_B
Motif
Other DBs
NCBI-GeneID:
16995657
NCBI-ProteinID:
XP_005537584
UniProt:
M1VJM5
LinkDB
All DBs
Position
15:complement(482926..485334)
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AA seq
802 aa
AA seq
DB search
MRAFAEWLGNGAADAAASVVFHSEERRLLFNCSEGTQRLCIEYKVRLGKLSHVFLSRLDA
DTCAGFLGLMLSLADAGHAGLTMFAPRGLEKTLSTAKRFASRPQYPLHVHELGEDEPSDP
LVQNPLFAVYALPWLVDEQLQRSLATQKDQVKRHCGERRDEEVPEALSSSSKNEVAERIF
VTYAVRVADQKGRFVTERAAALGIPRGPLYGRLQRGESIEVEQPDGTRRTVHPTDVMEPS
SPGPLLVMLCASSPDLVSQMQAPSGRQRLKQWFQRLAASTPTHRQKRPVCVFHFLCAEVF
SDPQYQEWALDVFGADAYHSVACESFSNQRITFRGQAAMLERLKFVDWNWFLEPWTAPAD
PRARTTSALPATWQLAQPLLRFNAAPRTTLGWALPESHAAANHGWSRLNVPREPDTLKRT
SSNNDSKTYSVLFLGTGSALPSRYRNVSAILVDLVDHALFLDAGEGTFGQLVRAVGLDTA
KAMLLHRVRCIWISHMHADHHLGVGSLVALRTRLARELPQSERLGTAMMPLMVLGPRLLG
RWLEALAELEPMSYIFLDNAALLQSDTSPLSEYFPQTLGIHLRTLPVDHCPEAYGLVLES
ALAAGWDQNGSKEQQALPVPTSAPSTARSSDNAAAAASWKLVYSGDTLPYDAGLIAAARG
ATLVIHEATFEDGKEAEALLRKHSTIGQALGTIESMQPQRAVLTHFSQRYPKLPLISSAE
TQQRLKANSCLLAWDLMRLPWFSKDGEQAGSRTLTTTPPAVANSDVVSLFLQRLLTEFAS
EFEEPLEIADSELDAELASSEG
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
atgcgagcgtttgcagagtggctcgggaacggtgctgctgatgcggcagcgtcggtggta
ttccactcggaagagcgtcggctgctctttaactgcagcgaaggcacccagcgactctgc
attgagtataaagtgcgattgggaaaactgtcccatgtttttctcagtagactggatgcc
gacacctgcgccggattcctgggtctgatgctttccctggcggatgccgggcatgcaggg
ttgacgatgttcgcaccgcggggactagagaaaaccctctccacggcgaagcgctttgcc
agtagaccccagtatccgctgcatgttcacgaactgggcgaggacgagccttcagatccg
ctcgttcagaatcccttgtttgccgtgtatgcgttgccttggcttgtcgatgaacagctg
cagcgctcactggccacccaaaaggatcaagtgaaacgacactgcggggaacgacgagat
gaggaggttccggaagccctatcctcgtcgtcgaagaacgaagtcgctgagcgaattttc
gtaacatatgcagtacgcgtcgctgaccagaagggtcgttttgtgaccgagcgtgcagca
gccttggggattcctcgggggccgctctacggtcgacttcagagaggcgagtccattgaa
gtggagcaacctgatggaacccgccgaacagtgcatccaactgacgttatggaaccttcg
agtccgggaccactcctcgtgatgctctgtgcctcctccccggacctggtatcacagatg
caggcacccagcggtcgtcaacgtctcaagcaatggtttcagcggcttgctgcatcgacg
ccaacgcacagacaaaaacgaccagtatgcgtctttcatttcctctgtgcggaagtgttc
agcgatcctcaatatcaggagtgggctctggacgtgttcggtgcggacgcgtaccactca
gtggcctgtgaatcgttcagtaaccagcgtatcaccttccggggccaagcggcaatgctc
gaacgactcaaattcgtagactggaactggtttctcgagccgtggacggccccagcggat
ccacgagcccgtactacgtcggcactgcctgcgacatggcagcttgcgcagccgctcctg
cgtttcaacgctgccccgcgaacaacacttggttgggcgttacccgaatcgcacgctgct
gcaaaccatggatggtcgaggttgaacgttccccgagagccggataccctcaagcgaacg
tcaagcaacaacgattccaagacgtattccgtgttgtttctgggaaccggcagcgcactt
cccagtcgatatcgtaatgtgagcgcgattctcgtggatctcgtggatcatgcactcttc
cttgacgccggtgaaggcacttttggtcaactggttcgagctgtcgggcttgatactgcc
aaggcgatgctgttgcaccgcgtgcgttgcatatggatatctcatatgcatgccgatcat
catctgggcgttggttcgttggtcgcgttacggacgcgactagcgagggaacttccgcaa
tctgagcgactcggaacagcgatgatgccgctgatggtgctcggaccacgactgctggga
cgttggctggaggcattggcggagctcgagcccatgtcgtacatttttctggataatgct
gcgttgctgcaatcggatacgtctccattgagtgagtatttcccacagacgctgggtatc
catctgaggacgctgccggtggatcactgccctgaggcgtacggtctggtcttggagagc
gcgcttgcagccggttgggatcagaacggctctaaggagcagcaagcgcttcctgtgcca
acaagcgcaccaagtacggcgcggagtagcgataacgctgcagctgctgcttcgtggaag
ctcgtctattccggggatacgctgccgtatgatgcgggtctcattgcagctgcacgagga
gcgacactagtgattcacgaagcaaccttcgaggacggcaaggaagcggaagcattgttg
cgcaagcactctaccattggccaagctctgggtaccattgagagcatgcagccacagcga
gcagtattgacccacttttcgcagcgctatccaaagctgccgctgatatcgagtgcagag
actcagcagcggttgaaggcgaattcttgtctcctggcctgggacctgatgcgtctgcct
tggttttcgaaggacggcgaacaggcgggaagcaggaccctgacgacgacaccgccggca
gtcgcgaacagcgacgttgtgtccctgttcctgcagaggctgctgacggagtttgcatcc
gagttcgaggagccgctggagattgctgattccgaattagacgctgagttggcgagttca
gagggctga
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