KEGG   Cyanidioschyzon merolae: CYME_CMO281C
Entry
CYME_CMO281C      CDS       T00175                                 
Name
(RefSeq) vacuolar protein sorting-associated protein Vps4p
  KO
K12196  vacuolar protein-sorting-associated protein 4
Organism
cme  Cyanidioschyzon merolae
Pathway
cme03250  Viral life cycle - HIV-1
cme03272  Virion - Hepatitis viruses
cme04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:cme00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    CYME_CMO281C
   03272 Virion - Hepatitis viruses
    CYME_CMO281C
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    CYME_CMO281C
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cme04131]
    CYME_CMO281C
   03400 DNA repair and recombination proteins [BR:cme03400]
    CYME_CMO281C
Membrane trafficking [BR:cme04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-III complex
    CYME_CMO281C
DNA repair and recombination proteins [BR:cme03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    CYME_CMO281C
SSDB
Motif
Pfam: AAA Vps4_C MIT AAA_lid_3 AAA_16 RuvB_N AAA_5 AAA_22 IstB_IS21 AAA_14 AAA_25 NPHP3_N TIP49 DUF815 AAA_24 AAA_33 RNA_helicase AAA_18 NRBF2_MIT nSTAND3 Parvo_NS1 AAA_17 Mg_chelatase AAA_2 AAA_28 NACHT ATPase_2 PhoH Viral_helicase1
Other DBs
NCBI-GeneID: 16995753
NCBI-ProteinID: XP_005537655
UniProt: M1V9M2
LinkDB
Position
15:complement(711749..713350)
AA seq 533 aa
MTSFVDKGIEFANKATQTDREARRTRDHETFEAAYHYYLRAIEYLMTAIRWEKSERTRVL
LQTRVREYISRAESIKELLKRGAYEQASGSDDGADGLPFESESYTNGGATAAATLSPHTG
SGESNGAAAAAAAAAARERRRGRGPADGSGGSGAGAEKAGTAASAPTKDETERLRQQLAS
VIVRERPQVRWNDVAGLDGAKEALKEAVVLPMRLPLLFTGKREPWRGILLYGPPGTGKSY
LAKAVATESAASFFSVSSADLVSKWQGESEKLIRQLFRMARESAPSIIFIDEVDALCSSR
SESDSDSTRRIKTEFLVQMQEGLSTGDETRKEGKHVLVLGATNLPWQLDPAIRRRFERRI
YIPLPDERSRRRMFEIHIGDTPHSLSACDFERLAHVTEGYSGADIEIVVRDAIMQPIRRL
QMATHFRQVSPRPHHRTLQRDGGAEDTSSNNNAARGVRFTNTASAELLWTPCSPAAPGAV
EMNLYDVPADKLLVPDVRYSDFEEVLLHTKPTVSKADLGAYERFTRDFGQECV
NT seq 1602 nt   +upstreamnt  +downstreamnt
atgacttcgtttgtggacaaaggaatagagttcgcgaataaagcgactcaaactgatcga
gaggcgcggagaacacgggaccatgagacgtttgaggcggcgtatcactactatcttcgt
gctatcgagtacctgatgaccgcgattcgctgggaaaagtccgagagaacccgggtgctc
ttacagactcgtgtgcgtgagtacatatcacgtgctgaatctattaaggagctgctgaag
cgtggcgcctatgaacaggcctcggggagcgacgacggtgcggacgggttgcccttcgag
agcgagtcgtacacaaacggaggtgcgacggcggcggctaccctgagcccgcacaccggc
tcgggtgagtcgaacggggcagcagcagcagcagcagcagcagcagctcgagagcgacgc
cgcggtagagggcctgctgatggaagcggcggttctggcgctggtgctgagaaagcgggt
accgccgcctcggctccaaccaaagacgagaccgagcgcctgcgccagcaactggcgtcc
gtgatcgttcgcgaacgcccccaggttcgctggaatgatgtagctggtctagacggcgcg
aaagaggcactgaaggaagcggttgtgctcccgatgcgcttaccgttgctttttaccggt
aagagagaaccgtggcgtggtattctgctgtacggcccaccgggcaccggtaagtcgtac
cttgcaaaggctgttgccacagaaagtgcggcatcgtttttcagcgtgtcgtctgcagat
ctggtcagcaaatggcagggtgaatcagaaaagctcattcgacaactctttcgaatggcg
cgcgagtctgcaccctctattatctttattgatgaagtggatgcgctctgttcgagcaga
tccgaatctgactctgattcaactcgaagaatcaaaacagaattcttggtgcagatgcaa
gaaggcctttcaactggtgatgagactcgtaaggagggaaagcacgtcttggtactgggc
gccaccaatttgccatggcagctggatccggctattcgacggcggttcgagcgccggata
tacattccacttccagatgaacgctcgcgtcggagaatgttcgaaattcacatcggagat
acaccacatagtctcagcgcttgcgatttcgagcgccttgcccatgtaactgaaggctac
agcggtgcggatatcgaaatcgttgtccgtgatgcaatcatgcagccgattcggcgcctg
caaatggcgacgcatttccgacaagtatcgccgcgtccacaccatcgaaccctgcagaga
gacggcggtgccgaagatacatcctcgaacaacaatgcggcgcgcggtgttcggttcacg
aacactgcatctgcagagctactctggacgccgtgctctccggcggcaccaggagcagtg
gaaatgaacctgtacgacgtcccagccgacaagctgctcgtacccgatgtccgttacagt
gatttcgaagaagtactgctccataccaagccgactgtcagcaaagcagatttaggagca
tacgagcgctttacgcgtgatttcggccaagagtgcgtttga

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