Cyanidioschyzon merolae: CYME_CMQ125C
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Entry
CYME_CMQ125C CDS
T00175
Name
(RefSeq) probable transcriptional regulator, SIN3
KO
K11644
paired amphipathic helix protein Sin3a
Organism
cme
Cyanidioschyzon merolae
Brite
KEGG Orthology (KO) [BR:
cme00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cme03036
]
CYME_CMQ125C
Chromosome and associated proteins [BR:
cme03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
CYME_CMQ125C
REST complex
CYME_CMQ125C
Heterochromatin formation proteins
Other heterochromatin formation proteins
CYME_CMQ125C
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAH
Sin3_corepress
Sin3a_C
PAH_ZNF598
SAGA-Tad1
Motif
Other DBs
NCBI-GeneID:
16996564
NCBI-ProteinID:
XP_005538071
UniProt:
M1V6B2
LinkDB
All DBs
Position
17:complement(289068..293723)
Genome browser
AA seq
1551 aa
AA seq
DB search
MEESEDRLLERISGEASLVPPETQTVPLRVEAEPQRPQGSAGLGSSEEAGMILQSTDDRS
ERAEALRSETENVPRDVTADTMPREGARTIEDELATLVEGAHSHVRETATQPISPTSSQH
KTHLEFTEKQVTQNLEPTVSGKNSSSKRESDSTERAGAARTVLKLDPQSEETSAAADRMN
QPAETEEGSQARALRVEDALAYLEQVKAQFEDRPRIYAKFLDIMKEFKAQTIDTPGVIEQ
VTRLFRGYPNLVLGFNTFLPAGYKIELSDCLDAAPVHAETPGPANERDDAKITVAAEDTR
ARAPYPGAITRPSQHAVPDAYRVAEMSSAMGNAHIRAGPEAFRAFQPSQEPKQLHVPQRV
ADTVADSAAVVNAQAVGVPPSLSTFNNEEFDHAIQYVNKVKQRFQNQPAIYQRFLNILQA
YQRDGEDKFSVLDEVSQIFRGHPDLLEEFKSFLPDSVEDEIESARQITWAKRAASNLGAT
GGPTKRTKRSRRSETAQGVSLDGRDAPLQAALVPQHLEQTIATAPHASSTAATALSGLSP
ISYGARAELLFFEKLRERMEAHQFHEFIKCLSLYNQEIIGRTELMSLADELFGHRHILSE
AFRTFLDACAPARRSKHPTDAESAMSGVEAALAILEGRAPPSATAPPVDGLWRYKSLSEA
AAESRERCDTSYKRIPSEFQSMPCSGRGELEKQVLNDIWVSVPTGSEEGSFKHMRRNQFE
DNLFRCEDDRYELDMVIETNAATIHKLEPLAMVIAHMSDEEKAKHMLAEHALSAVHYRAI
ERVYGAHGPEMVMHVKMQPSVAVPIVLNRLKQKDEEWRRARVEMNKLWREICERNYFKSL
DHRSFYFRQSDKRTISVRGLLQDIHDIAEVRTLMEAITVAVFAANIMAGSCDCVAFGCGF
GHPALSREFENSWRARQVALQCVHGGTFECAHASLSAACGDSAAAPERDPFAVVSALEPP
CLRFRLRLKKAHQDLYALVSFLSHLEYGPMECAHLLQFYAELFGRFFGINLHDPGVRAVE
TPGECTAPVVREETDSELADVSGLLRNELARAADERSAGDSPAASDSVSRKSSPDENFCA
EMDTRDGGNGLDPVILSLSEEVPSVRPGEAPAIKAETGSTSVPGPKRNARVERMRYRNDS
VLFADESLYILMRLYEIAFQRLAAARQMAQSQYERQRSARMNEQRQPEAAMDLKSISDSL
YNPEGEARAEATLRAPSDIYREYMDMLRRYLSNAIDSQEYEDYCRRVLGPESYVLFTLDK
VLFKLVKQAYNTAQSRLVALYFAQEQDLVRGLVPDGDGVTDAEAQALCIAEVSYCIKALQ
ILRDERGGNLYRFQVQDAPGPVGSGASDLEPKEDRATLASTPAILTVTLLTSDEGIPRRR
DTAAAAEAAASYLGFFAWQGQHQHQHTLDMLPMAVDARKLYAFERSVVNVPLERSFASWC
RRLGHATSSDPDRISLYETWKRQLMLQVLISNGLESKMSLNTNRLVHIGETCDELLRRKQ
DSFSGESSHMEAAASHQRHASERARRRRLRRWHQLYRQWDAAQKQSTIPVL
NT seq
4656 nt
NT seq
+upstream
nt +downstream
nt
atggaggagtctgaagatagattactggagcggatctcgggtgaggcatcactggtgcca
ccagaaacgcaaacagtgcctctgcgcgttgaggcagaaccacagcgtccgcagggatct
gctggtctcggaagcagcgaagaggccgggatgattttgcaaagcacagatgatcgtagc
gaacgcgctgaagcgctacgttcggagaccgaaaacgtgcccagagatgtcacggcggac
accatgccgagagaaggtgcacgaacaatagaagatgaactggcgacgctagttgagggt
gcgcattcgcacgttcgggagacagcaacccagcctatatcgcctacttcgagccagcac
aaaacgcacttagagtttacagagaaacaggttacgcaaaaccttgaaccgacggtgagc
ggtaaaaatagtagctcgaaacgcgagagcgacagcacagaacgagctggtgccgcacgc
acggtgcttaagctcgatccccagtccgaggagaccagtgcagctgctgaccgaatgaat
caacctgctgagaccgaggaaggctcgcaggcgcgagctttgagagtcgaggacgctctg
gcttatttagagcaggtgaaggcccagttcgaggatcggccgcgaatctatgcaaaattc
ctggacatcatgaaagaattcaaggcgcaaacaatcgatacaccaggcgtaattgagcaa
gttacgcgtctttttcgcggctatcccaaccttgtgcttggcttcaacacttttctgccg
gcgggatacaaaattgagctctcagactgcttggatgcagcacccgttcacgcagaaaca
cccggccctgcaaatgaaagggatgatgcgaagattacggtcgctgcagaggatacccgt
gctcgcgctccatatccaggcgcaatcactcgtccaagtcagcatgctgttccagacgca
tacagagtcgctgaaatgtcttctgccatgggaaacgcccacattagagctggacctgaa
gcgtttcgagcgtttcagccttcgcaggaacccaaacagctgcacgtcccgcaacgtgtt
gcggataccgtcgccgacagtgcagctgtcgtgaacgcacaagccgttggggtaccacca
agcttgtccacgttcaacaatgaggaattcgaccacgctatccaatacgtgaacaaagtc
aagcagcgttttcagaaccaaccagcaatctaccagaggtttctgaacattctgcaggcc
tatcagcgcgacggagaggacaaattcagcgtgctggatgaagtctctcagatctttcgc
ggtcatccagatctcctggaagagttcaagagttttcttccagattctgtggaggatgaa
atcgagagcgcaagacaaataacttgggcaaaacgagcggcgagcaaccttggtgcgacg
ggaggacccacaaagcgaaccaaaaggagtcgacgcagcgaaactgcgcagggagttagc
ctcgacgggcgtgatgctccgctccaggctgcactcgttccacagcacctggaacagacg
attgcgacagcgccgcacgcgtcttcaacggctgctactgcgttgtctggactttcgccc
atttcttacggagctcgagccgagcttctctttttcgaaaaattgcgggagcgcatggaa
gcacatcaatttcatgagttcatcaagtgcctgagtctttacaaccaggagattatcggc
agaacagagctgatgagccttgctgatgaacttttcggacacaggcatattttaagcgag
gccttccgcacgttcttggatgcttgtgccccagcacgcaggtccaagcatccaaccgat
gcagaaagtgcaatgtcgggcgtcgaggcagcgctggcgattctagagggccgtgctcca
ccgtcggcgaccgcccccccggttgacgggctctggcgctacaagtcgctcagcgaggcg
gcagcagagtcccgggaacgttgtgacaccagctacaaacgcataccttccgaatttcaa
tccatgccatgtagtggtcgcggtgagcttgagaaacaggtactgaacgatatctgggtg
tcagtgccgaccgggagcgaggagggctcgttcaagcacatgcgtcgcaatcagtttgaa
gacaatctctttcgatgtgaagacgatcgctacgagctggatatggtcatcgagacgaat
gcggcaacgattcataagcttgaacctctggccatggtgatcgcccatatgagcgacgaa
gaaaaggcaaaacatatgctcgccgagcacgccctcagtgcagtgcattaccgggccata
gagcgagtctatggagcacacggcccagaaatggtcatgcatgtgaagatgcaaccaagt
gtggcagttccaattgtcctgaaccgcctcaaacagaaggacgaggaatggcgaagagct
cgcgtcgaaatgaacaaactctggagagaaatctgtgaacgcaactatttcaagagcctg
gatcaccgaagcttttatttcagacagagtgataagcgcacaatcagcgtccgtggcctc
ctccaggacatccacgacatcgcagaggtccggacgctcatggaagcgatcacggtcgct
gtctttgccgcgaatatcatggctggctcctgtgattgtgtcgctttcggctgcggtttc
ggacaccctgcgctcagccgtgagttcgaaaacagttggcgcgctcggcaagttgctttg
cagtgcgtccacgggggcacgttcgagtgcgcgcacgcatcactgagcgctgcgtgtggc
gattcagcggcggcgcctgaacgcgacccctttgcggtggtgtcggcgctagagcctccg
tgcttgcgattccgcctccgtctgaagaaggcgcatcaggacctatatgcactggtgtcg
tttttgtctcatctagagtacgggccgatggaatgtgcgcatctcttgcagttctatgcg
gagcttttcgggagattctttggcatcaatttgcatgatcctggtgttcgcgcagtcgag
actcctggcgagtgcactgcgcccgtcgttcgcgaagagacggattcggagcttgcggat
gtgagtggccttttgcggaatgagctggctcgtgctgcagatgagcgctcagcgggggac
tcgccggcggcctccgacagcgtctcgcgaaagtcatcgcctgatgaaaacttctgtgct
gagatggacacacgggatggcgggaatggcctcgatccagtcattctgtcgttgtcagag
gaggtgcccagtgtgcgacccggagaggcaccagcgatcaaggcggaaaccgggtcgact
tctgtgccgggtccgaagcgcaatgcaagagtcgagaggatgcgctatcggaacgactcg
gttcttttcgccgacgagtccctgtatattctcatgcggctctacgaaatcgcattccag
cgtctggccgccgctcgacagatggcgcagtcccagtacgagaggcaacgatcagctcga
atgaacgagcaacgtcagcctgaggcggccatggacctcaaatccatctccgactccctc
tacaatcccgaaggtgaagcgagggcggaggcgacgctgcgcgccccctcggacatatac
agagaatatatggacatgctccggaggtacctgagtaatgccatcgatagccaagagtat
gaagactactgccgccgcgtactggggcctgaatcgtacgtgctctttaccttagacaag
gtgctattcaagttagtgaaacaagcgtacaacacggctcagtcgagactcgttgccttg
tattttgctcaagagcaggatctcgtgcgcggtctggtccctgatggtgatggcgttacc
gacgcggaagcgcaagctctatgtattgcagaggtgtcgtactgtatcaaagcgctacaa
attctacgcgatgagcgcggtgggaatctctatcgcttccaggtgcaggacgctccgggg
ccagtggggtcaggcgccagtgacctcgaacccaaggaggatcgagccacgctggcgtcg
actccagcaatcctcactgtaaccctgctgacaagcgatgagggcattccacgtcgacgc
gataccgctgcagctgcggaagcggcggccagctatctaggattctttgcttggcaagga
caacaccagcaccaacacacgctggatatgttgccgatggcggttgatgcccgcaaactc
tacgccttcgagcgttctgttgtgaacgtgccgctggagcgatcctttgcgtcctggtgt
cgccgacttggccacgctacgtcatcggatcccgatcgaatatcgctttacgaaacctgg
aaaaggcagctcatgcttcaagttctgatttcgaacggactcgaatcgaaaatgtctctc
aacacgaatcgtttggtccatattggagaaacatgtgacgagttgctacgacgtaagcaa
gattctttctcaggggaatcatcgcacatggaggccgctgccagccaccaacgtcacgca
agcgagcgagctcgtcgacggcgtttgcgtcgatggcatcaactttatcgccaatgggat
gctgcccagaagcagtcaactattccggtactgtaa
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