Cyanidioschyzon merolae: CYME_CMQ215C
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Entry
CYME_CMQ215C CDS
T00175
Name
(RefSeq) chromodomain helicase DNA binding protein CHD
KO
K14437
chromodomain-helicase-DNA-binding protein 7 [EC:5.6.2.-]
Organism
cme
Cyanidioschyzon merolae
Brite
KEGG Orthology (KO) [BR:
cme00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cme03036
]
CYME_CMQ215C
Chromosome and associated proteins [BR:
cme03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
CYME_CMQ215C
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
FYRC
Chromo
FYRN
HTH_CHD6-9
ResIII
HDA2-3
HTH_Hrp3
DEAD
AAA_22
Motif
Other DBs
NCBI-GeneID:
16996503
NCBI-ProteinID:
XP_005538145
UniProt:
M1VAH5
LinkDB
All DBs
Position
17:542811..548855
Genome browser
AA seq
2014 aa
AA seq
DB search
MGLQLEHTGRRLRGDSARQSKRSRSESSSGTDALSEASSWLRDESSGLYPEAEGVRRQPR
RSARASRSMRVESSASEQSDEALYLSDSSTSSQSSTGADSEACVPRAKRRREARGSEATR
SSRGEVEEVSDAHTPRTPGDQGASLDSYPMERILARRVRHMTLEEAAEMNSSLSPASKVS
AGAEERSPAEGSGDRGRLRTPMVEEYLIKFRGLSYIHCQWVREDFILAQPSGKQRLQRFL
SKEQQEAAYRGVRGVLGSASDAEDHDEEDEAIPEDFVTVDRIIAEHVGPDGTRQFLVKWC
SLGYDECTWEYEHEVQDDLKIKEFYERNTLPPESERKRPPRPNPASFVRLSNPSFKNGGE
LREYQLEGLNWLVHCWFKRQGSILADEMGLGKTIQAVSFLDYLYREQHLRGPFLVVAPLS
TLGHWKREFETWTHMNAIVFHGNVRARDVILQYEWTYAGMSVRSGLFKWHVLITTYEIIL
QEANRLRGIPWAVIVVDEAHRLKNRQSKLFDELLGFRSEHRVLLTGTPLQNNSLELFSLL
HFLEPAKFPNEKEFQQAYGDIRDAEAVENLKALLRPYLLRRMKEDVEKAIPPKEETLISV
ELTRIQKQWYRALYEQNFAFLEQGGKRNNVGNLRNIVMELRKCCNHPYLIRGVEEIETQS
LAALGEDALMRHLVEASGKLVLVDKLLPVLREKGHRVLIFSQMIRVLDILEDYLHWRGYK
FERLDGRVRGNDRQQSIDRFQKDPENFVFLLCTRAGGQGINLTVADTVIIFDSDWNPQND
VQAQARCHRIGQERDVKVYRLITRGTYEEEMFDRASKKLGLDQAVLQNMGVDQGGSGNML
STMGRDDINRLLRRGAYDVFNEDDSAADAFTAENIENIMARRTKTIKTGGAGDVGPSAFS
KATFTADADGMFGDETWLNDKEFWKKLMPLAASAPNPDIIYEPRRRRQVQRFQPGENSDE
ESGEHESDSDEADLSEDKLGPDGRKLWNKSERHRFHRAMLTYGYGEWERIAQAMARAQKS
ANQRSVFEVQRAARSWLRLLAEHTAAALVAGDAADATQQERLAQERLVKLCNEKRVLQAA
FEPWIDENTQQPVDESFTEPVFTEDSYLDAMERNGYNWIERLECIEDIKDLVRNGDVDGE
IPSITASGIYVMPDWWDAEFDRALILGTHRHGYGQYDDMRRDPDLHFFGRLAPLPQPEPG
NGNAAEDGDARLAEWTALDQSYREKAASLGLDAEQLRAREMPTLHILNTRLKKLLKAFQR
LRRRQDRRRSQLEQAEERARAREEQQLARRRQREAFERERSARFEVQAQRWSKREKHDFG
RLLGRLGGVVYDADGRIDWSVYKERCQLSRKFDYNLERMYIEMLAMARESFRRTGDDALA
KALDEPIEYALQWRASQHESRLAEMQRLSRESSDAATRLAALEECLRAPQLEGFPPTELE
ELRTLFILSRRFVERVRVLHFIRVVAAPLLQNPELCSHLIENIPPPRSDTLPSWWRVAEG
HDLALLRGVIRYGFDTAPLALDPSLPFLPICSDLAQRASTAERAPEDGDLSTAETETRST
NNENDIVAMFAKHRGVFLRARIAAEVLVYGRIERVHASASSGSVKPDALPPQVPPLPMDT
SSMITHAAGTLGSLRVYATASGEPISSEGGDDFEPVPLELVTVDMLQTFKQLKKRASGVV
DVSSLPEQVVSLGRLLQRQMIREETMSGSTGLEHRSSAPAAAAAAAASLDMVTASAGSSG
KNASLVPSLATATAERCGHTGDTETNPVPVATGQRAVVPAAAAAGSTGHGSASQPQVRRS
QLHKVARDEHGNVRLPIQIGVVLRIESLGHIDPRESFHNERAIYPVGYRSVRTYTSCVDV
NRSTQYVSEILDRDGHPWFRVTCADMPEEPFEDKSPSGCWSQIMRIIRERTPLDRRRVHA
TVSGPEYFGLTQPIVEELLQSLPGAAQLKNYNFKRFLSPEKAESEESLHPLGAATDSPAA
GTAQEQLRAVERAKTMADPVRIRLCLEPMETNPD
NT seq
6045 nt
NT seq
+upstream
nt +downstream
nt
atggggcttcagctggaacacactgggagacgtttgcgaggtgactcagcacgtcagtcg
aaacgctcgcgctcggagtcgtcctccggaaccgatgcgctcagtgaagctagttcgtgg
ttgcgcgatgagagcagcgggctctatcctgaagcagagggtgttcgtcgacaaccgagg
cgcagtgcgcgggctagccgctcgatgcgtgttgagtctagcgcttcggagcagagtgat
gaggctctgtacctgagtgattcgtcgacgagctcgcagtcttcgactggagccgatagc
gaagcgtgcgtgccgcgagcaaagcgtcgtcgtgaagcgcgaggctcggaggcaacccgc
tccagccgaggggaggttgaagaggtttccgatgcacacactccgagaacacccggcgat
cagggtgcttcgttggactcgtacccaatggagcgcatccttgcgcggcgtgtacgccat
atgaccctggaagaggcggctgagatgaactcgagtttgtcaccagcgtcgaaagtctct
gctggcgccgaagagcgttcgcctgcagagggctcgggcgaccgcggtcgtctgcgtacc
cccatggtagaggagtacctgatcaagtttaggggactctcctatatacattgccagtgg
gtccgggaggattttattctggcgcagcccagtgggaagcagcgtctccagcggtttctg
agcaaagaacaacaagaggctgcataccgaggtgtccgaggtgtcctgggatcggcctcc
gatgctgaggatcacgatgaggaggacgaagcaattcccgaagacttcgtcacggtggat
cgaatcatagccgaacacgtgggccccgacggcacacggcagttcctcgtcaagtggtgc
tcgctcggctacgatgagtgtacctgggaatacgagcacgaagtccaggacgatctcaaa
atcaaggaattttacgagcggaatacgctgccaccggaaagcgagcgaaaacggccacca
cggccaaacccagcaagcttcgtgaggctctcgaatccatcctttaaaaatggaggcgag
ctacgcgagtaccagctcgagggcctcaactggctggtgcattgctggttcaaacgtcag
gggtccattctggccgatgaaatgggcctgggcaagaccattcaagctgtatcattccta
gactatctctacagggaacagcaccttcggggtcctttcctggttgtcgcgcctctatcc
acattgggacattggaagcgagagtttgaaacctggactcacatgaatgcaatcgtcttc
cacggcaacgtcagagcgcgtgatgtaattctgcagtatgaatggacctatgcgggcatg
agcgtcagatcaggcctttttaagtggcatgttctcattacgacgtatgagattatcttg
caagaagctaatcgcctgcggggaataccctgggctgtcatcgtcgtggacgaagcgcac
cgactgaagaaccgacagtccaagctgttcgacgagctgcttggcttccgttccgaacat
cgggtactgctcaccggaacgccgctccagaacaattcgctggagctcttctcgctgctc
cattttctagagccagcaaaattcccgaacgagaaagagttccaacaagcctacggagat
attcgtgacgccgaggctgtcgagaacctgaaagcgttactgcgaccgtatctcctgcgc
cggatgaaggaggatgttgagaaagcgataccgcccaaggaagagacgctcataagtgtc
gagttaactcgaattcaaaagcagtggtatcgagcgctgtacgagcagaactttgctttc
ctcgaacaaggcggcaagcgcaataatgttggtaatctgcgcaacattgtgatggagctt
cgcaagtgttgcaaccatccgtatctcattcgtggtgtcgaggagatcgaaacacaatca
ctcgctgccttaggtgaagatgcactgatgcgacacttggtggaagcatctgggaagctg
gtgcttgtcgacaagttgctgcctgtactgcgcgaaaaagggcatcgcgtgcttatcttc
tcgcaaatgattcgcgttttggatatactggaggactatctccactggcggggatataag
tttgaacgactggatggccgggtccgcggaaacgatcgccagcagtccattgatcgcttc
caaaaggacccggaaaatttcgtgttcctgctctgcactcgtgctggtggacagggcatc
aatctaaccgttgccgacactgtgattatttttgatagtgactggaatccgcaaaatgat
gtacaagcacaggcgcgctgtcatcgtatcgggcaagaacgcgacgtgaaagtatatcgc
ctcattacgcgcggcacgtacgaggaagagatgttcgatcgagcgagcaaaaagctcgga
ctcgaccaagcagtgctgcagaacatgggtgtcgaccagggcggcagcggcaacatgctc
tccaccatgggccgcgatgatatcaatcgcctcttacgacgtggtgcctatgatgtattt
aacgaagacgactcggcagctgacgcattcactgctgaaaatatagagaatatcatggcg
cgacgtaccaagacgatcaagactggtggcgcaggcgacgttggaccgtcagcgttttcc
aaggcaactttcacggcggatgctgatgggatgtttggcgatgaaacttggctgaatgac
aaagaattctggaagaaactgatgccactagcggcctctgcaccgaaccccgatatcatc
tatgaaccgcgtcgccggcgacaagttcagcgcttccagccgggcgaaaactctgatgag
gagagcggcgaacacgagtccgacagcgatgaagccgacttgtccgaggacaaactcgga
cccgatggtcggaaactctggaacaagtccgagcgacatcgatttcatcgggcgatgctc
acttatggctacggagagtgggaacggattgcccaggccatggccagggcccaaaaaagt
gccaatcaacggtctgtgtttgaggttcaacgcgctgctcgcagctggttgcggctactt
gcggagcacactgctgccgcgctggttgctggcgatgccgcggatgccacgcaacaggag
cgtctcgcccaggagcgcctcgtgaagctttgcaacgagaagcgcgtgctgcaagctgcc
tttgaaccctggatcgatgagaacacgcaacaacctgtcgatgaatcgttcactgaacca
gtcttcactgaagatagctacctcgatgcaatggaacggaacgggtacaactggattgaa
cgtctcgaatgcatcgaagacatcaaagatctggttcgaaacggtgacgttgacggtgag
attccctcgatcaccgccagtggcatctatgtgatgcccgactggtgggacgccgagttc
gatcgagccctgattctgggcacccacaggcacgggtacggccagtacgatgatatgagg
cgggatccggatctgcactttttcggacgactggcgcctttgccgcagccggagcctggc
aatgggaacgcagccgaggacggcgacgcgaggctcgccgaatggaccgcgctggaccaa
agctaccgtgaaaaggccgcgtctttgggactcgacgcggaacagctacgagcacgcgag
atgccgaccctacatatactgaatacgcgactgaagaagctgcttaaggcattccagcgc
ctacgacggcgacaagatcgtcgacggagccaactggaacaggccgaagaacgtgcgcgt
gctcgtgaggagcaacagttagcacgccgacgacaacgcgaggcgtttgaacgcgaacga
tcggctcgctttgaggttcaggcacaacgctggtccaagcgtgaaaagcacgactttgga
cgtcttcttggacgtctcggcggcgtggtctatgacgcggatgggcgtattgactggtcc
gtttacaaggagcgctgccagctttcacgcaagttcgactacaacctcgagcgcatgtac
attgagatgttggccatggctcgggagagttttcgacgtaccggtgacgatgcgctcgca
aaggccctcgatgaacccatcgagtatgcgctgcagtggcgggccagtcagcatgagtcg
cgcctcgcggagatgcagcgactgagccgcgagagcagcgacgctgccactcgattagct
gcgctcgaggagtgccttcgagcgccccaactggaaggttttccaccgactgaactcgag
gaattgcgcaccctgtttattctctctcgccgtttcgtagaacgcgtgcgtgtcttgcac
tttatccgcgtcgtcgctgcaccactgctacaaaacccggaactctgttcacatctgatc
gagaacataccgccgcctcggtcggacacactgccctcctggtggcgtgtcgctgagggc
cacgacttggcgctcctgcgcggcgtcattcgctacggcttcgacaccgccccgctagca
ctggacccgtcgctcccgtttctgccgatatgctcggatttggcgcagcgagcgagcacc
gctgaacgtgcccccgaagacggtgacctcagcaccgcagaaacagaaacacgatccaca
aacaacgaaaacgacatcgttgctatgtttgccaaacaccgcggtgtctttctgcgtgca
cgcatcgccgctgaggtgctcgtttacggacgtatcgagcgcgtgcatgcaagcgcatcg
tcgggatccgtgaagcccgatgccctgcccccgcaggtgccaccgctgccgatggacacg
tcatcgatgatcacgcatgcagcgggcacgcttggcagcttacgtgtctatgcgacggcc
tcgggggagccgatctccagcgagggtggcgatgatttcgagcctgttcccctggagctc
gttaccgtggatatgttgcagacattcaagcagttgaagaagcgagcatctggggtcgtc
gatgtatcgagtttaccagaacaagtagtgagccttggtcgcttgctccagagacaaatg
atccgcgaagagaccatgtcagggagcacggggcttgagcaccgatcttctgctcctgct
gctgctgctgctgctgctgcgtcgctggacatggtgacagcgtcggctggatcgagtggg
aaaaacgcctcgttggtgccgagcctcgccacggcaactgcggagcgttgcgggcatacc
ggtgacacggagacgaatcccgtgcctgtggcgacgggtcagcgtgcggttgtgcctgca
gcggcggcagcgggatcgacaggtcacggatcggcgagtcagccgcaggtacgcaggtcg
cagctgcacaaagtcgctcgcgatgaacacgggaacgttcggttgccgatccagatcggg
gtggtcctacggatcgaatccctcgggcacattgatccacgagagagtttccataacgag
cgagcgatctacccagtcgggtatcgatcggtgcgcacgtacacgagttgcgtcgatgtg
aatcgctcaacacagtatgtatcggaaattctggatcgagatggacatccgtggttccgg
gtcacttgtgcggacatgccggaggagccgttcgaggacaagtcgccgagcggatgttgg
tctcagatcatgcgaatcattcgagagcgaaccccgttggatagacgacgcgttcatgcc
acggttagcggtccagagtatttcggactgacacagccgatcgtcgaagagcttttgcag
tcccttccaggggccgcacaactcaagaactacaattttaagcggtttctttctccggaa
aaggcggaatctgaggaatcgctccatcccctgggcgcagcgacggattcaccggcagcg
ggtacagcgcaagagcagttgcgagcggttgagcgcgcgaagaccatggcagatccggtt
cgtatcagactctgcctagagccgatggaaacaaaccccgactga
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