Cyanidioschyzon merolae: CYME_CMQ331C
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Entry
CYME_CMQ331C CDS
T00175
Name
(RefSeq) similar to DEAH-box RNA helicase Dhr1
KO
K14780
ATP-dependent RNA helicase DHX37/DHR1 [EC:
5.6.2.6
]
Organism
cme
Cyanidioschyzon merolae
Brite
KEGG Orthology (KO) [BR:
cme00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cme03009
]
CYME_CMQ331C
Enzymes [BR:
cme01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
CYME_CMQ331C
Ribosome biogenesis [BR:
cme03009
]
Eukaryotic type
90S particles
Helicases
CYME_CMQ331C
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C
DEAD
DHX37_C
AAA_22
ResIII
nSTAND3
AAA_16
nSTAND_NTPase5
T2SSE
PhoH
AAA_19
OB_NTP_bind
Motif
Other DBs
NCBI-GeneID:
16996281
NCBI-ProteinID:
XP_005538230
UniProt:
M1VAN2
LinkDB
All DBs
Position
17:849094..853617
Genome browser
AA seq
1507 aa
AA seq
DB search
MIEATAVEVDREGNHGQRNRWHRVPKRRRQAVPAAALKENAQRRQETAAKRGLERHAERE
RYFAILGSQMLSSSLRDQLLPSQALSGHKRRRAGPEVASHPHPPERTEAERAPTPTATAP
KHLSQAPVQKRFRSRQHQTPAALAARIGSDPEPGTDTPPECSKANARTSVVVRCESGHPV
SMPEPKDTQNLCEMPSHAHSDVMVDRTDATLNTLAGIAVCSPSSALSIDTRLQTSCETTR
RASNVSSSSSSSLMLAPSITDVDNGRTTAEQTSTGKLSLALVSLPNQGAYCQHLYQHRQE
MLAPVHHEDDDGYAAVVPVAHGLPAAAYRRDSVAAPAPRSFYVTLERTADIQTRRASLPV
FELEQEFMEMVRDRDVVIVVGPTGSGKTTQIPQFLYEAGYGHPDERRRPGGSVAIVQPRR
LAAVWCAERVASELGTEILRQTREDETGGVRQPVQLGVQVGYHVRHDRKVHDEHTRLVFV
TDGILLQQLAEDIALRHFGCVVLDEVHERSIQMDLLLGLLSRTVRLRRSPAWQSAYPNIG
PLKLIIMSATVDAESLARHPRLFTSATSAMLAKLPSGSVPEMPRSPATRSEALRVSSCAI
SDVPSVSSEATLCCFAKASDAGVSSPDAEAHLLPAVAPQHAGSDALDTRHTQPASVAALQ
ALRAAAEADAAIAAGRSAGDKPEAGAASAPAVLVVPGRQYPVTIHFARQTHRDYIAAACE
KCLKIHQRLPAGHILVFLPGRRAIAQLCASLRKACRGTCERPLHVKPLYAGISRVAQEAL
EHAVHGTERVCIVATNVAESAITIPNVRYVVDSGLVRRVMTHAYNSEGVSLHQVTWTSQA
SAQQRAGRAGRTAPGHCYRLYSVATFVNLFPATDTPEIQRMPLESVLLFLSRLGIRHPLR
FPWVTTPGAAALRKAHWVLRVLGAVQDERASRHVTSPSVEERALAAPSAAPDDLSLEAPT
PLGIAMARVPVSARLARLLFWVRDHSPDAIRYGIRLVALLSVREIMSSGSGSGSGTLPLA
NKDSSESASGGRYAFRRALYHPQSELLTKLRFLGAAEYAWRAEGGFRALTRFCALYGLQE
STVREALLIVQQLERRADRFLGKQCLDDLAPNGTAETRPEGSETDGCKRPQDVRDLAAGC
FCGSEPDPMIDDDDTETEADNDNDDGIPFQDPSVHVSKGQRRGFVCRWGDEPLRPPSPEQ
EQTLCRALLAAFPDQVARRMHTEEAKDWRQQHSGVRTNGVLFRCPVWETKDCESVEGVVA
RVSPCCPVDVSGDEVQYLLYTEVTLEELEPSPDPATKSPATVATLRGSTRIEPAWLTTLN
HPCLVRYGDVVAEPAPKYDAEADQVMAWVRCLYGREAWTLPLCWMPLPAFTQDPLDGQIE
DQRERRICIFARALLERQVLPRLPPPAIQHALQPSPAVLTWGLEHGERSTSGDRHCNLGY
RRHRAAVLLVTALKRYDITSRQALFRQWRRDPFYLRYEFLLWVPAAHQGMIQQQWTTLTQ
QDAGCSV
NT seq
4524 nt
NT seq
+upstream
nt +downstream
nt
atgatcgaggcgactgccgtagaggtagatcgtgaagggaatcatggtcagcgtaaccgg
tggcaccgcgttccaaagcgcagacgtcaagcagttcccgctgcagcgttgaaggaaaac
gcccagcgccgacaggagaccgccgcgaaacgtggcctagagaggcacgccgaacgagag
cgatattttgccattcttggatcacagatgctttcaagctcattacgggaccagttacta
ccttcgcaagcacttagtggacacaaacgacgacgcgccggtcccgaggtggcttcgcac
ccgcacccgcctgagcgaacggaggccgaacgcgcgccgacgcccacggcgacagctccg
aagcacttgtcgcaggcaccggttcagaagcgatttcggtcgcgtcagcaccagaccccg
gcagccttggcggcacgtattggcagcgatccagagcctggtacagacaccccgcccgag
tgctcaaaagcaaatgctcgtacgagcgttgtggtgcggtgtgaaagtggtcacccagtt
tctatgccggaacccaaagatacacagaatctctgtgaaatgccgtcacatgcccattca
gatgtcatggtggaccgcacggacgctacactgaatacactggcgggtattgcagtgtgt
agcccgtcgtcggcgctgtccatcgacacgcgtcttcaaacgtcttgcgaaacaacacgc
cgcgcgagtaatgtatcatcatcatcatcatcatcgttgatgctagctccatccataaca
gacgtagacaatgggcggaccactgcagaacagacaagtactgggaaactgtcgctcgcc
ttggtatcgcttccgaatcaaggcgcatactgtcagcacctgtaccagcatcggcaggaa
atgctagcccctgtacatcatgaagacgacgatgggtacgccgcggtggtgccggttgcc
cacggattacctgctgccgcgtaccggcgggattctgtcgcggcgcctgcacctcgctcc
ttctatgtgacactggaacggacagcagacatccagacacgtcgagcgtctctgcccgta
ttcgaattggagcaggaattcatggagatggtccgcgatcgcgatgttgtcatcgtggtc
ggcccaacaggctctgggaaaacaacccagataccgcagtttctttacgaggctgggtac
gggcatcccgacgagcggcgccgacccggtggttcagttgcaattgtccagccacgacgt
ctggcagcagtctggtgtgcagagcgcgttgcctcagagctaggaacagaaattttacga
caaacgcgagaagacgagacgggcggcgtgaggcaacctgtccaactcggcgtccaggta
ggatatcatgttcgccacgatcgaaaagtccatgacgagcacacccggcttgttttcgtt
accgacggtattttgctccaacagctagcggaggacattgctcttcgacactttggatgc
gttgttctcgacgaagtacacgaaaggagcatccaaatggatttgctcctgggacttctc
agtcgaacggttcgcctgcgacgttcacccgcctggcaatcagcgtatccaaatatcgga
cctctcaagctaattatcatgtctgcgacggttgatgcagaatccctggcgcggcatcct
agactctttacgagcgcgacatcagcgatgcttgcgaaactgcccagtggtagcgtaccg
gaaatgccgaggtcgcctgcgacacgctcggaggcattgcgggtgtcatcatgcgcaatc
agcgatgtgccttcggtatcgagcgaggcgactctgtgctgcttcgcgaaagcttcggat
gcgggtgtgtcttcacctgatgctgaggctcatctgctgccagccgtcgctccacagcat
gcaggcagcgatgcgctggatacgcgtcatacgcaaccggcgagtgttgcggcactgcag
gcactacgcgctgcagcagaagctgatgcagccatagcggcaggacgttccgcgggcgac
aaaccagaagccggcgctgcttcagcgccagcagtgctggttgttcctggacgtcagtat
cctgtcaccatccactttgctcgacagacgcatcgtgactacatcgctgctgcctgcgag
aaatgtctcaaaattcaccaacgcttacctgcgggccatattctggtgttcctcccgggt
cgccgggccatcgcacagctctgtgcttccttgcgaaaggcgtgccgaggcacctgcgaa
cgcccacttcatgtcaaacctttatacgcgggaatctcccgggtcgcccaggaggcgctc
gagcacgccgttcacggaacggagcgggtgtgcatcgtcgcaacgaatgttgctgaaagc
gccatcacgattcccaacgttcgctacgtcgtagacagcggactcgtgcggcgagtcatg
acccatgcgtacaacagcgagggcgtctcgctgcaccaagtcacctggacaagtcaagcc
tctgcgcaacagcgagctggcagagccggacgcaccgctcccgggcactgttatcgcctc
tattctgtcgcaacatttgtgaacctctttccggcaacggatactcccgaaatccaacgc
atgccgttggaatcggtgctgctgtttctgagccgcctcggcatacgccatccattgcgc
tttccctgggtaacgacaccaggagcagccgcgctgcgcaaagcgcactgggttctccgg
gtgctcggagccgtccaggacgagcgtgcttctcgccacgtgaccagtccgtcggttgaa
gagcgcgccttggcggcaccgagcgctgcaccagatgacctgtcgctggaagcgcctaca
ccactggggatcgccatggcccgcgtaccggtatcggctcggctggcaagattgcttttc
tgggtgcgtgaccacagtccagacgctattcggtacgggatccgccttgttgcccttttg
agtgtacgtgaaatcatgagcagcggcagcggcagcggcagcggcacgttaccacttgcg
aacaaggactcatcagagagtgcatctgggggccgttatgcttttcgccgagcgctctat
catccacagagcgagctgcttaccaaacttcggttcctgggtgctgctgaatacgcttgg
cgagcggaaggcggcttccgtgcactcactcgattttgtgcattgtacggtctgcaggaa
tccactgttcgagaagcgctcctcatcgtgcaacagttggagcggcgcgcagaccgcttc
ctgggcaagcagtgcttggatgatctcgctcctaatggaacagcagaaactcgaccagag
ggatccgaaacagacggttgcaagcgtccgcaggatgtgcgagatctcgctgcagggtgc
ttttgtggcagcgagccggaccccatgatcgacgatgacgatacggaaacagaggcggac
aacgacaacgacgacgggatcccgttccaggatcccagtgtccacgtatccaaggggcaa
cgacgaggtttcgtttgccgctggggcgatgaaccgctgcggcctccatcaccagaacag
gagcagacgctttgtcgtgccctgctggcggccttcccggaccaggtagcgcggcgaatg
catacagaggaggccaaggattggcggcaacagcactctggagtgcgtacgaatggagtc
cttttccgctgcccggtctgggaaacaaaggattgcgagtcggtcgagggagtcgtggcg
cgtgtgtcaccgtgctgcccggtggatgtctctggtgatgaagttcagtacctcctgtat
accgaagtaacgctcgaggagctggaaccttcaccggacccggccacaaagtctcctgct
actgtggcaaccctgcgaggctcgacgcgtatcgaacccgcctggttaacgacgctgaat
catccgtgcttggtacgctatggagacgtcgttgcggaacctgctccaaagtatgatgca
gaagcggatcaggtgatggcctgggtgcgctgtctctacggtcgagaggcctggaccttg
cccctctgctggatgccgcttccagcgtttacacaggaccccttggacgggcagatagag
gatcagcgggagcgcaggatctgtatcttcgccagggcactactagagcgacaagtgcta
ccgcgtcttcctccgccggctattcagcatgcattacaaccgtcacctgctgtgctcacc
tggggtctcgagcacggcgaacggtctacatctggggatcgccactgtaacttggggtat
aggcggcatcgggcggccgttctcctggtgacagctctcaagcggtacgacatcacgagc
cggcaggcgttgtttcggcagtggcgacgcgaccccttctacctccgctatgagtttctc
ttatgggtgccagccgcacatcagggcatgatccagcagcagtggacaacacttacacag
caagatgcaggttgttcggtctga
DBGET
integrated database retrieval system
