Cyanidioschyzon merolae: CYME_CMQ363C
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Entry
CYME_CMQ363C CDS
T00175
Name
(RefSeq) SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily A
KO
K11654
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
Organism
cme
Cyanidioschyzon merolae
Pathway
cme03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cme00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
CYME_CMQ363C
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cme03021
]
CYME_CMQ363C
03036 Chromosome and associated proteins [BR:
cme03036
]
CYME_CMQ363C
Transcription machinery [BR:
cme03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
NoRC (nucleolar remodeling complex)
CYME_CMQ363C
Chromosome and associated proteins [BR:
cme03036
]
Eukaryotic type
Chromatin remodeling factors
CHRAC complex
CYME_CMQ363C
RSF complex
CYME_CMQ363C
WICH complex
CYME_CMQ363C
B-WICH complex
CYME_CMQ363C
NORC complex
CYME_CMQ363C
BRF complex
CYME_CMQ363C
NuRF complex (fruit fly)
CYME_CMQ363C
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
SLIDE
Helicase_C
ResIII
DEAD
HAND
HTH_CHD1_Hrp3
AAA_14
AAA_22
Myb_DNA-binding
Motif
Other DBs
NCBI-GeneID:
16996329
NCBI-ProteinID:
XP_005538254
UniProt:
M1VKV9
LinkDB
All DBs
Position
17:938723..942046
Genome browser
AA seq
1107 aa
AA seq
DB search
MTVEGSLKGDAAAPVADAEPAASPRNEPEAAPGPPSPDTSRRLNHELAKQNAEVARDTQW
STRQRLKYLVLRYDIFAHFLSSGSLAKQKLVEAAGSVETASPGEGAAGGTPGRRRLTERE
EDALLLEADEEGHSESVHLTVQPPGIRGTMRPYQIEGLNWLVRLHQHGINGILADEMGLG
KTLQTIALLAFLKVYKGIRGPHLVIAPKSTLGNWNLEFEKFCPDFRVVRFHGDQEERARV
AASQLIVNRFDVCVTSYEIAILEKAVLRKFHWRYLIIDEAHRIKNENSVLSQVVRMYNSQ
NRLLITGTPLQNNLHELWALLNFLLPDVFSSSEDFDAWFEQVEGTTEEDAKAEMVRQLHA
VLRPFLLRRLKSEVARELPPKKERIVFVRLTKMQHELYRSLLKKDVDAISGQGGDRARLL
NILMQLRKCCNHPYLFEGVEDRTLDPFGEHVVQNSAKLALLDKLLPRLRAEGHRVLIFSQ
MTRMLDILEDYCCEQMRGYPYCRIDGSTDSETRERMIEEFNAEGSDKFIFLLSTRAGGLG
INLASADTVILYDSDWNPQVDLQAMDRAHRIGQKRPVTVLRLICESTVEERILRRALMKL
KIDNMVIQQGRLVEGQKALARGEVLDMIRFGADSFFRADAQDFKDEDLDEILQRAEAKTK
EVTESMEEEARKRSQHGLNLMDFKMSDDVGSVYQFEGKDWSAEAASSAKNFFFLDVGKRE
RRNTIKSYDEAAYFREALYHGGASGDVGSTQPQPKQRMRLPPEPKVYDWQFFNVDRIMEL
YEKERQIIDEYNRTCENLTEDQMPPEPEPLSPSERAELERLLQEGFSNWRYREFQQFLRA
CERHGRHNIEAIAADLAQVKTFDEVKEYAEAFWRLGPDHIRDWPRLLEQIEQGEARVAKR
EEMERALRNKIARYADPWNELELPASVQGKVFSDEEDRFLLIMVNNLGYGRWEELKMEIR
RSWRFRFDWLIKSRSAVELKRRVDVLLRAIERENAEFEKAEAAAANRKKHAQVRSVRRVK
SEASSSEKESAHNDSRTTKRAAAGKASEQKPTANAKRKASSSTVTTLDSTSKRSKRPNTD
SVTATSEKRSTGPIERYARRKGTTKAA
NT seq
3324 nt
NT seq
+upstream
nt +downstream
nt
atgacggtggaaggctctttaaagggcgacgctgctgcacccgtggcagacgcggagcct
gcagcgtctcctcggaacgaaccggaagcagcgcctggtccgccctcaccggacacgtcg
aggcgactcaaccatgaattggcgaaacaaaatgcagaagttgcaagagacacacagtgg
tcgacgcgtcaacgcctcaagtacctggttttgaggtacgatatcttcgcacacttttta
tcgagcggatcactcgcgaagcagaaacttgtggaagctgccggctccgtggaaaccgct
tctcccggagaaggagcagcgggaggtactcccggtcggcgtcgtctgacggaacgcgaa
gaggacgcgctcctgcttgaagcggacgaggaagggcatagcgagtcggtacacttgacg
gtgcagccaccaggcatacgtggaacgatgcggccataccagatcgagggcctaaactgg
ctagtccgactgcatcagcacggcatcaacggcattcttgcggacgaaatgggtctcggc
aagacgctgcagaccattgccctgctagcgtttctgaaggtatacaaaggcatccgcgga
ccgcacttggtgatcgcgcccaagtccacgctcgggaactggaatctggagtttgagaaa
ttctgcccagatttccgcgtcgttcgttttcacggggaccaggaagagcgagcccgagta
gccgcgtcgcagctcattgtgaatcggtttgacgtttgcgttaccagttatgagattgcg
atccttgaaaaggcggtgctgcgtaagtttcattggcgttatctcattattgatgaagcg
caccgcatcaagaatgagaactcagtactcagccaggtggtgcgcatgtacaattctcag
aatcgtcttttgatcaccggtacaccgctgcaaaataacttgcatgagctctgggcgctg
ttgaattttctgctccctgatgtgttcagctcttcggaggatttcgacgcctggtttgag
caagtagagggaaccactgaggaggacgccaaggcagaaatggttcgtcaattgcatgcc
gttcttcggccgtttctcctgcgtcgcctcaagtcagaagtagcgcgagagctgccgccg
aaaaaggagagaatcgtattcgttcgcttgacgaaaatgcagcatgagttgtatcggtcc
ctgcttaagaaagatgtggatgcaattagcgggcaaggcggcgaccgcgctcgactgctg
aacatcctaatgcagctgcgcaagtgctgcaatcacccgtatctattcgaaggcgttgaa
gatcgcaccttggatccgtttggtgagcatgttgtgcagaacagtgcaaaattggcgttg
ctagacaaactgttacctcgcttgcgcgctgaggggcatcgggttttgatcttttctcag
atgacgcgtatgctggacattttggaggactactgctgtgagcagatgcgagggtatccg
tactgccgtatcgacggctcgacggatagcgaaacgcgcgagcgcatgatcgaggaattc
aacgcagaaggaagcgacaagtttatcttcttgttatcgacgcgcgccgggggtctcggc
atcaatctggcctcagctgataccgtgattctgtatgactcagactggaatccgcaagtt
gatttgcaagcgatggatcgtgcccaccgcattggacagaagcggcctgttacggtgctg
cgtctcatttgtgagtcaacagtcgaagagcgcattctgcgccgagccttaatgaagctc
aagatagacaacatggtcatccagcagggcaggctggtggagggccagaaagcgcttgct
cgaggcgaagtgctcgacatgattcgattcggtgcagattccttcttccgagcggacgca
caagacttcaaagacgaggacctggatgaaatcctgcaacgcgccgaagcaaagaccaaa
gaggtaaccgaaagcatggaagaagaggctcggaaacggagccagcatgggctcaacctc
atggatttcaaaatgagcgatgacgtcggctccgtctaccaattcgagggaaaggactgg
tcggcagaggcagcgtcatcggctaagaatttcttcttcctcgatgtgggcaagcgagag
cgccggaacacaatcaaatcctacgatgaagcggcctacttccgcgaagcactgtatcac
ggcggtgccagcggcgatgtaggtagcacccaaccacaaccaaagcagcgcatgcgcctg
ccgcccgaacccaaagtctatgactggcaattcttcaacgtcgatcgcatcatggagttg
tacgagaaagagcgccaaataattgatgaatacaatcgaacatgcgagaatctgactgaa
gatcagatgccgccggagccggagcctctttcgccgagcgaacgtgcggagctcgagcgt
ctgcttcaagaaggtttcagtaactggcggtatcgcgagttccagcagtttctgcgggct
tgtgagcgccacggccgccacaacatagaagcgattgctgccgatctcgcacaggtgaaa
accttcgacgaagttaaggagtatgcggaagcgttttggagactgggtccggaccatatc
cgtgactggccacgcctccttgagcagatcgagcaaggtgaagcacgtgtggccaagcgg
gaagagatggagcgagcgctgcggaacaaaatagcacgttatgcggatccatggaacgag
ctcgagttacccgcttctgtccaaggtaaggtgttctccgatgaggaggatcgcttcctt
ctcattatggtgaataacctcggttacggacgctgggaggagctcaagatggaaattcgt
cgcagctggcgtttccgttttgactggttgatcaaatctcgctcagctgtagaactgaag
cggcgtgttgacgtcctactccgagctattgaacgggagaatgccgagttcgaaaaagcc
gaagctgcagccgcgaatcgtaagaagcacgcccaggttcgtagcgtacgtcgcgtcaaa
tccgaggcaagttcgagcgaaaaggaaagcgcacacaacgacagccgcaccacaaagcgt
gcagcggcagggaaagcgtctgagcagaagcccacggcaaacgccaagcgtaaggcatcg
tcaagcaccgtgacgaccttggactccacgtccaagcgctcgaaacgccccaacaccgac
tccgtgaccgcgacgagcgagaagcgctctaccggacccatcgaacggtacgctcgtcgc
aaaggcactacaaaagcagcctga
DBGET
integrated database retrieval system
