Cyanidioschyzon merolae: CYME_CMQ453C
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Entry
CYME_CMQ453C CDS
T00175
Name
(RefSeq) probable cryptochrome
KO
K12118
cryptochrome 1
Organism
cme
Cyanidioschyzon merolae
Pathway
cme04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
cme00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
CYME_CMQ453C
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Usp
Motif
Other DBs
NCBI-GeneID:
16996558
NCBI-ProteinID:
XP_005538316
UniProt:
M1V6L5
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Position
17:complement(1169497..1172643)
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AA seq
1048 aa
AA seq
DB search
MPAYPPSETSGEECPWLALSSSPLLEAGREVNAHPPPGRTPALAVAAAQGATQRPILVWY
RGHDLRIDDHAAFCAAAETGMPVVPVYVWNPQLPWMSKPGRAGRWRLRESLLALDREFAH
RYGEDARLVVLQGSLVESIVELARETNASAVYFNRCYDIGAAEVDRTLEQRLAVWNVELV
SFKSELLVEPWELAQDNGEPFNEFHPFMEKWLAFPKPPPPVAAPLRLQTLPGLRQRVSHV
EIHELELVSDLSPEWCAQMECMWPLVGERAAWITLSRFLRERYPKFGRRESRCALDGTSR
LSMHVRFGEISPRQLYAAIMADIVSDAPSALSLGNGIPAHSREQNGYLESPHRISATPHS
MDATAIATATAAVPGYQPQRAPMFPLRVQVNRPRGSSGTTYFLYDHEDDDDDDNNNNNGD
EADDNDDGGRGGTDQAAPRSTRHALLNRERHATAGEALAANTRTHTDAADAQQTISAVKA
FLKNMCLREFAYHLLFHNPQAFEEPLLPEFRAFPWRWNDQSMLEVWRSGQTGYPIIDAAI
RELRTTGYLHNRIRFMIAGFLTKYLLIPWQHGLRFLYDHVLDGDIACQTLGWQWTAGCHT
DAFPFACIVNPITFGLREDPHGEYVKRWVPELAALPTCYVHRPWRAPASVLAQAGIALGS
CYAHPVVDSRTARARALDSMDLMRRVFVLRQPTRSLWSLIDLQQPQLWLEQSASDSDDSG
METFSFTNGTPYALHDRFSRGSTTIIEELAPTVEHNALQSLSYGNHSRRAFGIGSVHTAA
ALVPESRQRQRRGYAPSWIERADAGASEVGAMQPGGRSSGSSSQLSVVRPEQLNEFLRWV
TGPEDAAANQEQASATANEQLRAWNDPLERVQTADIGRELSPITTSAQSVTLEPAQPQKR
RRGGQRNPTRASMLGVAEREEILAAIALQPNQPFHCFARFLMQHYRFTPNTVFGPHTDFV
RLRALKAELAAAGTSCEDSTTSERSRSYERQKSRCLGHVLTVAKMKHFLRNTLGLEVTGQ
WDRRAHGGVRGPYAYGLTRCPASDDKRR
NT seq
3147 nt
NT seq
+upstream
nt +downstream
nt
atgcccgcgtatcctccttcagaaactagtggagaggagtgtccgtggcttgctttgagc
agctccccgttgctcgaagcggggcgggaggtgaacgcgcatccgccaccgggacgtaca
ccagcgctcgcagtggctgcagcgcagggcgcgacacagcgccccatactggtatggtac
cgggggcacgacctccgaatagatgatcatgctgccttctgtgcggctgcagaaacgggt
atgccggtggttcctgtgtacgtttggaacccgcaactgccgtggatgagtaaacctggc
agagcagggcgctggcggctgcgagagtcgctgctggcgctggaccgggagttcgcgcac
cgctacggcgaagatgcgcggctggtggttctgcaggggagcctcgtggaaagcattgtg
gagctggcgcgggaaacgaatgcgagcgcagtctacttcaaccgctgctacgatatcggt
gccgcagaagtggaccgaacgttggaacaacgccttgctgtttggaatgttgaactcgtt
agcttcaaatcggaacttcttgtggagccgtgggagcttgctcaagacaacggtgagcca
ttcaatgagtttcaccccttcatggaaaagtggctcgctttcccgaaaccgcccccacct
gtagcagcgccattgaggctgcagacgctgcctggtttacggcaacgcgtttcccatgtc
gagattcatgagctggagctggtctctgatctcagtccggaatggtgtgcccagatggaa
tgcatgtggccgcttgtcggtgagcgagcagcgtggattacgttgtcaaggtttctccga
gagcgttatcccaaattcgggcgtcgagagtctcgttgtgcgctcgacggcacgagccgc
ctctccatgcatgttcgtttcggtgagattagcccgcggcagctgtatgcagcaatcatg
gctgacatcgtgtcggacgcgcctagcgcgctttccctagggaatggaataccagcgcat
tcgagggagcagaacggttacctggagtcgccacaccgaatcagtgcaacacctcactcc
atggatgctactgctattgctactgctactgctgcagttcccggttatcagccgcagcga
gcgccgatgtttccgcttcgggttcaagtgaaccgaccacgaggctccagtggcacgacc
tactttctctacgatcatgaggatgacgacgacgacgataataataataataatggtgat
gaagcagatgacaacgacgacggaggtcgtggtggtaccgatcaagcggctccaaggagc
acacggcatgcgctcctgaaccgtgagcgtcacgctacagcaggcgaggcgctcgcggca
aacacacgtacccacaccgatgcagcagatgcacaacagaccatcagcgcggtgaaggcg
ttcctgaaaaacatgtgcctccgagaattcgcgtatcacctgctctttcacaatccacag
gccttcgaagagccgctactgcccgaattccgcgcctttccttggcgctggaacgatcag
agcatgctcgaggtttggcgaagcggccaaaccgggtatcccatcattgacgcagcgatt
cgggagttgcgtaccactggatacctgcataatcgcattcgtttcatgatcgccggcttc
ctgaccaagtaccttctcattccgtggcagcatggtctccgctttctttacgatcatgtt
ctcgacggggacatagcctgtcagacgctcgggtggcagtggacggcaggctgccacacc
gatgcgttcccgtttgcgtgtatcgtcaatccgatcacgtttgggctcagagaagatccc
catggtgagtacgtgaagcgctgggtacccgaattggccgcactgcctacgtgttacgtc
catcgtccgtggcgagcgccagcttcagtgcttgcgcaagcgggtatcgcgctgggctct
tgctatgcgcatccggtggtggactcgcggacggctcgagcgcgagcactcgactccatg
gacctcatgcggcgtgtatttgtactgcgacaaccaacccgatccctgtggtctttaatt
gatctgcaacagccgcagttgtggcttgagcaatctgcatcggattcggacgattccggg
atggaaacgttctctttcacgaatggaacgccatacgcacttcatgatcgcttttcaagg
ggctcaacgaccatcattgaggagctcgccccgaccgtcgagcacaacgctcttcagtcg
ctttcctatggtaaccacagtcgtcgagcattcggcattggcagtgtacatacagcagca
gcgttggtgccagaaagccgacaacgacaacgacgaggctacgcgccctcctggatcgaa
cgtgcggacgcaggagcgtctgaagttggtgcgatgcagcctggcggacgctcttcgggg
tcgtcttcgcaactgagtgtagtgcgtcccgagcaactcaatgagtttctccgctgggta
actggtccagaggatgctgccgccaaccaggaacaagcatcggcaacggcaaacgagcag
ttgcgagcatggaatgacccgctggagcgtgtccagactgcggacattggtcgggagctc
tcgcctatcacgacgagtgcgcagagcgtgaccctggaaccagcgcagccacagaaacgg
cgacgtggaggccagcgcaatcctacgcgagcgagcatgctcggtgtagcggaacgcgaa
gagatattggcagcgatagcgctgcaacctaaccaaccgtttcactgcttcgcgcgcttc
ctgatgcagcactatcgtttcacaccgaatacggttttcggaccacatacggactttgtt
cgcttgcgcgcgctcaaagcagagttagctgctgcaggaacatcttgcgaggattcgacg
acctccgaaaggagccgctcgtatgaacgacagaaaagccgttgcctcggtcacgtttta
actgttgcgaaaatgaagcactttctgcggaatacgcttggactagaggtcactggccag
tgggatcgtcgagcgcacggcggggtgcgaggtccgtacgcctacggcctcacgcgctgc
ccagcgagcgacgacaagcgcagatga
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