Cyanidioschyzon merolae: CYME_CMQ471C
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Entry
CYME_CMQ471C CDS
T00175
Name
(RefSeq) vesicle coat complex COPII, subunit Sec24
KO
K14007
protein transport protein SEC24
Organism
cme
Cyanidioschyzon merolae
Pathway
cme04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
cme00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
CYME_CMQ471C
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cme04131
]
CYME_CMQ471C
Membrane trafficking [BR:
cme04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
CYME_CMQ471C
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_BS
zf-Sec23_Sec24
Sec23_helical
DUF6622
Vps36-NZF-N
Motif
Other DBs
NCBI-GeneID:
16996522
NCBI-ProteinID:
XP_005538328
UniProt:
M1VGJ7
LinkDB
All DBs
Position
17:1214377..1218840
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AA seq
1487 aa
AA seq
DB search
MNPASRPGSLPQGEQRGVAGDGTQRRVAVTAHEAAPLPRPGTGPSPADYATASASRYGAA
YEQQRLSERSTFRQQQQASAESHGTGNMGQISEAQLARNVSDQADQVTQRPGRSSAWSSE
ASSQGNGTAYTGAGAAMGAAPPPPGRQSVLPTPQQPQRSPAGLSSRSGAYEATAHSESAS
ALGQALPPQRISPERTAPPVRGNMSNTMASDALHASAADIYGSPRRFDTPSDNQGAMTTD
PRAAASALASNSIPRAGVAQGLQARPMPQGTDSLSSDGQHSAEGGNPTNSAHTGRAGGYV
PAPLGSSAYTGRGVTAATLEAGQHMEHQRPMLISDQGRSNLSHPSGAPGDARYTPQAATS
QWATTGYGVADSIAFGSNHGDSATATAVQHPSGIRTGPDTARGMPSAQPVPGYRAAAPTV
PHLHPSMDASMMNGASPVATATSAGHGTAAGNQYTEVSQRNTVPFSSQAPAVMPRAPPGG
PSGGITTTVSPPGQNRVPSFSNPLSMGTSLSAGANALGSTTRSTISSGYSPVGYANRPVP
GVLMPSPGDGPPTAGQFAPAMASVGPAYARQGNSAVSYQAVPGNVPYPMQPIPGSGGAGP
QMAGPPVPGSYANLPTGMSTAPGAPYYGPPGGMVSAPVQAIPAPAAAAATPSTDFASLPR
PALDPDSVMYRVWFGDALQRDLLWPQQVLAGDRSAHGGGYNPGAAGAGMPFEPQINFCAF
DPTWCCPIELFRPCHPSRMRMSVNFFPNSAATRSKTGLPLAAIVRPLAPPLSDDPLDQVP
VVNFGTNGIVRCRRCRTYINFGVTFTDGGRRWRCNICQLLNDVPPEYYSPLDANGKRHDI
AERAELCSASVEFVAPSEYMIRPPQPPVYVFVLDVSYGSIISGAFITFVETIRSSLDLLP
QDGRTRVAVLTFDTQLTYCVLPPGQQGEPRFLVTPDVDDVFLPTPEDVLASLDESRPALL
RLLDKLQTIYDPATLQSTATLTGNALTNGSALGSAVMGAYYIMQHWGGKMVVLGASRPTM
GIAKLKDRDDAYALFTDREARLLSPEEGQYKRLAVDFVRAQVSVDLFLTPPSGTYVDVAS
LGCLSKYTGGELLYISGFEATRDGARLARALRRNLSRETGFEAVFRLRASNGVRCSRFHG
RFFTRSSDLLAQPNVDSDKTYVVELSFDEAQLSSRYLCAQSALLYTTSRGERRIRVHTIV
APVTSIVNELYRSADVNAVVNLLARSLFEHCTMKKADAVRRLIVDQIVDILAKYRQLLSS
PGNVTSSQLVLPDALRCMPLYALGIIRSVLLSRDAATAMVLRLDCKAALLQAIDNGSIGT
LMAFAYPNCIRLEDGTGVHASAAALSGMVLIDAGFEIFIWIAQDVPPPLLVSLLGPEITS
LFLAQPPPAHVPSPKALGEEVLRLPYHEPNDRGHEMRRRIHAVLEARWDAQPVVSLVRQG
TPAEARVLTLMTEDRTSSEMGYLEFLAAIQRQLQQRVVGSNAAAGRS
NT seq
4464 nt
NT seq
+upstream
nt +downstream
nt
atgaaccctgcaagcagaccaggctcgttaccgcagggcgagcagcgcggtgtcgctggt
gacggcacacagcggcgagtggcggtcacggcgcacgaagcggcacctctgccgaggcct
ggtacgggtccatcacccgcggactatgctactgcgtccgctagtcggtatggggcagcg
tacgagcagcagcgtttgtcggaaaggtccacgtttcggcagcaacaacaggcttccgca
gagtcgcacggtaccggtaatatggggcagatatctgaggcgcagcttgctcgtaacgtc
tccgatcaagctgatcaggttacacagcggccggggcgctcctctgcctggtcgagtgag
gcttcctcgcaaggtaatggaacggcatatacaggtgcaggggcggctatgggcgcagcg
ccgcctccaccaggtcgccaaagcgttctcccaacgccacagcaaccacagcggtcgcct
gcgggactgtcatcacgttctggggcgtatgaggcaactgcgcactctgagtcggcgtcg
gctctgggacaagcgttgcccccacagagaatcagcccagaacgcacagcaccacccgtc
aggggcaatatgtcgaacacgatggcatccgacgctctgcatgcatctgccgcagatatc
tatggatcaccgcgtcgttttgatacacccagtgacaaccagggggcaatgaccactgac
ccgagagctgctgcttcagctctcgcgtcaaacagtataccacgagcgggagttgctcaa
ggtctacaggcccgcccgatgccgcagggcaccgattcgctgtccagcgatggccagcat
tccgctgaaggcggaaatcctacgaacagcgcacatactggtagagctggcgggtacgtt
cctgctccattagggtcgagcgcctatacagggcgtggtgtaacggcagcgacactcgaa
gcaggacagcacatggagcatcagcgtccgatgctgatatcggatcaggggcgctcgaac
ctgagccatccgagcggtgcaccaggcgatgcgagatacaccccacaggctgctacatcc
cagtgggcgacaactggctacggagtcgccgactcgattgctttcggttccaatcatggc
gatagcgcaacagctacggctgtgcagcatccatcggggattcgtaccggaccggatacg
gcaaggggcatgccctctgcacaaccggtacctggttaccgtgccgcagcacctactgta
ccgcaccttcatccatcgatggatgcgtcgatgatgaatggcgcatcgccggtcgcaact
gctaccagtgccggacatggaaccgcggcgggcaaccagtatacagaagttagccagcgc
aatacggtaccgttttcgtctcaagcaccggctgtaatgcctcgagcaccgccaggtgga
ccctctggaggaatcaccaccacagtgtcgcctccaggccagaatcgtgtcccgtcattt
tcgaatccgttgtcgatgggtacgtcgctttctgctggcgccaatgcgctgggatctacc
acgagatcaaccatctcatccggatatagccccgtcggatatgctaaccgacctgtacct
ggcgttttgatgcccagtcctggagatggacccccgactgcggggcagttcgctccagca
atggcgtctgtgggtccagcgtacgcccggcagggcaattctgctgtttcataccaagca
gttccgggaaacgtgccgtatccgatgcaacccattcctggtagtggcggtgcggggccg
caaatggcgggtcctccagtacctggttcctatgcgaacttgccaaccggtatgtcgact
gcgcccggagcgccatactacgggccacctggcggaatggtaagcgcacctgttcaagcg
attccagcgccagcagcagcagcagcgactccgagtaccgactttgcatcgctaccacgc
cccgcactggatcccgactctgtcatgtatcgagtatggttcggtgatgctttgcagcgg
gacctcctgtggccgcagcaggttcttgctggcgaccgttccgcccatggaggcggatat
aatccgggagctgcgggtgctgggatgcctttcgaacctcagattaacttttgtgccttt
gatccaacctggtgctgcccgattgagctcttcagaccctgccacccgtcgcggatgcgc
atgagcgtcaacttcttcccaaacagtgctgctactcgcagcaagactggactaccattg
gctgcgattgtacgccctctggcaccaccactgagtgacgatcctcttgatcaggtgcct
gtggtgaactttggaacaaacggtattgtgcgttgtcgtcgttgtcgaacgtacatcaat
ttcggtgtaacatttacggacggtggtcgacgttggcgctgcaatatctgccaactgctc
aacgacgttccacccgagtactattctcccttggacgcaaatggaaagcggcatgatatt
gctgagcgggcagagctgtgctccgcctccgtcgagtttgtcgcaccgagcgagtatatg
attcggcctccacaaccaccggtttacgtctttgttttagatgtttcgtatggaagtatc
atttcgggggcgtttattacgtttgtagagacgattcgtagcagtctggatctgcttcca
caggatggtcgcacacgtgtcgccgtgctcacgtttgacacccagttgacgtattgtgtg
ctgccgccgggccaacagggtgaacctcgtttcctggtgacacccgatgtcgacgatgtg
tttctaccgacgcctgaggatgtgcttgcgtcgctggatgagtcgcggccggctttattg
agattgctcgacaaactgcagaccatctacgatccggcaacgctgcagagtacggcaacc
ttgacggggaatgcgctcacaaatggaagcgccttgggcagtgcagtgatgggcgcatat
tatatcatgcagcactggggtggcaaaatggttgtccttggtgcgtcgcgtccaacgatg
ggcatcgcaaaactcaaggatcgtgacgacgcctacgcgctctttacagaccgagaggct
cggctgctgtcgcctgaagagggccaatacaaacgcctagcggtcgactttgtccgagca
caggtcagtgttgatctgtttctgacgccacccagcggtacctacgtagacgtggcgagc
ctcggctgcctctcaaagtacactggaggcgagcttctctacattagtggctttgaagcg
acgcgcgatggtgctcgtctagcgcgagcgctccgccgcaacctctcccgcgagaccggg
ttcgaggcggtattccgactccgcgcaagcaacggtgtccgttgttcgcgtttccatggg
cgcttcttcacccgaagctccgaccttttagcgcaaccgaatgtcgattccgacaaaacc
tatgtggtggagctgagtttcgacgaggcacagctgtcaagtcgctatctctgtgcacaa
agcgcccttttgtacacaacaagccgtggggagcgacgaatccgggtgcatacaatcgtt
gcaccggtaacatccattgtgaacgagctctatcgcagtgccgatgtgaacgcggttgtg
aacctcctggcgcgctcgctcttcgaacactgcaccatgaagaaggcggacgctgttcgt
cggcttatagttgaccaaattgttgacatcttggccaagtatcgtcagttgctatcgagc
cctggcaatgtgacgagttcacagctcgtgctgcccgacgccttgcgctgcatgcctctt
tacgcgctgggcattattcgcagcgtgctgttgagtcgcgacgcagctacagcgatggta
cttcgactcgactgcaaagcggcacttttacaggcgattgacaacggcagtattggcacg
ctcatggcgtttgcgtaccccaactgcattcgccttgaggacggcactggtgtacacgct
tcggctgctgctctgtctggtatggtgctcatcgacgcgggctttgagatttttatttgg
attgcacaggatgtgccgccaccgctgctcgtttcgctccttggtccagagattacgagt
ttattcctggcacaaccgcctccagcacatgtacccagcccgaaagcgctcggtgaagag
gtactgcggttgccgtaccacgagccgaacgaccgtgggcatgaaatgcgccgtcgcatt
cacgctgttctggaagcgcgctgggacgcacagccggttgtttctctggttcgacagggc
acaccagcagaagcccgagtcctaacgctgatgactgaggatcgaacctcctcggagatg
ggctatctcgaatttctcgcggccattcagcggcaattgcaacagcgtgtggttggctcg
aacgctgccgccgggcgttcgtaa
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integrated database retrieval system
