Cyanidioschyzon merolae: CYME_CMR103C
Help
Entry
CYME_CMR103C CDS
T00175
Name
(RefSeq) DNA polymerase zeta, catalytic subunit
KO
K02350
DNA polymerase zeta [EC:
2.7.7.7
]
Organism
cme
Cyanidioschyzon merolae
Pathway
cme03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
cme00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
CYME_CMR103C
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cme03400
]
CYME_CMR103C
Enzymes [BR:
cme01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CYME_CMR103C
DNA repair and recombination proteins [BR:
cme03400
]
Eukaryotic type
TLS (translesion DNA synthesis) factors
B-family DNA polymerases
CYME_CMR103C
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B
REV3_N
DNA_pol_B_exo1
POL3_N
zf-C4pol
Motif
Other DBs
NCBI-GeneID:
16996778
NCBI-ProteinID:
XP_005538405
UniProt:
M1VB02
LinkDB
All DBs
Position
18:269378..275368
Genome browser
AA seq
1996 aa
AA seq
DB search
MDEALSGAFLCVKIINIDYYLWQPEHLSSDPGWLERFTPAQRGRSLPAVRIIGRTSAGST
VCLHLHNTFPRTYVPLPETVAHNPEAERRWTQRLRVALERALEQLHLQQRDQRQAPDANW
SANQPGSGAATEAPSSVEDAAADRYIYDITIEWRRCIYGFKANAQRFARIRYIHPAESAR
LVQALASGMLAAVDDGTMDPVLPARLQPYEAHLPYVLQVMADYGLAGFGCIGLCSGRFRP
PLASPRDAASEDADHGMQARHSASLVDNLPPDMVWNVPVKRQTDCHLEVDVWLPRDLHPA
HLHGEQEPTDLERHVPSLRLIWESERRRRCLSSWRQMWVPIAHCRLEREVQPMDTGLKQR
LGMVVSQALRKRAGAGNRQHQERRNAIALNDETSQADDLASALAAQFGYAVESSTAERLH
PESDLEDEVLWNWMEQNYRTGVGAANGQPVDTSFASAYALDTSVYEDEEQPVDEVATQKE
CADILECSLPLNETPGLGAETAKVATSPASLVHRQDTELGLSPPCSPSVAPSRTPVPESV
LASASELQPGHESEAVQAQASTTSRPRQASWCLAAFHLERSNVSPANWFMIPDQHPPFPF
KSEWGVAQQKPFYSAIEDKAFTTSGSSVRWFPQTPLWREVACRAFSSDSAADAAGLQTWR
TPLSLPPLPQHIERIERFRKRSRLLGASRKVIEVRMDSYGREVRTVAVLAAAKHAVSNSV
TVTEDALANARPASVGIKAETAPRSCRSPRSIELGTSPKAWRSPWTRASELVDAPESRSV
AIETPASVDSVQQGAPRAHREEELPALPADQAYGAASAAAPGPMEAACSSENGSASKWVS
PELLSASSSADSQHTEWKATSDVDAHRTTALPTQTDRNWQLHGVQASLDAYDTRVHSSSA
HASEVRSTRSPVLDPSPYPNSDPSLAQSSEARCTNSQVLDPLPHPDSDLTLRRPAREPLS
SAAAQRCRTFSDETGAMDPLPDTVAELEDDEAQLVPLVRPASPRYDEPSEFWSDAPHAAP
AFSSAAIRSLRTDREKRSRGRLSDITGPSQISSGRDSSGISGEPAPLEPLALHHQYGTET
FRVLAIESLSINRREQRPDALQDPLAAIGLVFRGDDSDADRHIMLVNSALRTNTGDDASA
ALTERTALGLVPTTGYTLRPTRVVVLGSEAALLRQLALLCRHLDPDILVSYSLRDGGIGY
LLQRAGVLGYDLASGLSRVALGVHDPKTERQWSLSMHPWETDTASGGIRLLGRYVLDVWR
IMQSEVKLSNYTFYRVVEEILGRRMPRLPWSTQRDWFTRGTAADCRRALELVLFRAAWTL
DLLEALDILGRSAEMATSYGIDLLSVFLRGSQYRVESLMARLAHAQGYVLVSPTAAQVRC
QPATAFIPLVMEPEARYYSDPVLVLDFQSLYPSMIIAHNICFSTCLGRVLLDSESDWCTF
ASGIPRVFGVLEAYSPDWIGLVEALATDATPDVEALLTVLPNQTVFVKPRVRHGILPLML
REILETRMMLKGGMEAIEKQHRTAPVPEAERLRLQAIYRMLNARQFAMKYIANVTYGYTS
ASFSGRMPCAEIADAIVSAGREAMERIVATVERLWGASHGARVVYGDTDSIFVLVPGASR
EVAFQLGRAMAEQCSALFPDPVRLKLEKVYSRSLLLAKKRYVGWAYESENQLMGMLDAKG
IETVRRDSCGLVQKILERALRLLFTGDQDLSPIRRYVQRQLQRVLQNRFDFRDAIFFKEV
QLGRYKPGYEPPAALVALRQLDQDPAAVPAFRERVPYVVIYGEPGSTLRELVVDPGQFLE
ARRQGRILRLNTQYYVRKQILPALERCFSLMGVDVFSWFQQVPRVAYRAPHSRGVPLGAH
QKSRIEHYLPGFCAVCGESCAPQTEVCRVCLTRIPDSLAIVQRKLHTAQQRLFRLQELCL
RCIGEGITASECRDRPGEPLSAGACLAPEQHHQHQSCWTQCWYPPCAHIECALLVERDKA
SLTTATYMHALGELSG
NT seq
5991 nt
NT seq
+upstream
nt +downstream
nt
atggatgaagcgctatcaggtgcttttctttgcgtcaagataatcaatatcgactactac
ctctggcagccggaacacctctccagtgatccaggctggctcgagaggtttacaccggcc
cagcgaggtcgttcgcttccggcggtacggatcatcggacgcacttcagcgggttctaca
gtctgcctgcacttgcacaatacgtttcctcgcacgtatgtgccattacccgaaaccgtc
gcacataatcctgaggctgaacggcgctggacgcagcgactccgggttgcgctggaacgg
gcactcgagcagttgcacctgcagcagcgcgaccagcgacaagctccagatgccaactgg
tctgcaaaccagccaggttctggtgctgccaccgaggcgccttcatcagtcgaggacgct
gctgctgaccgctacatttatgatatcacgattgaatggcgtcgctgcatttacggcttt
aaagcaaacgcacaacggtttgctcggattcggtacattcatccagcagagagcgcacgt
ctcgtgcaggcactcgctagcgggatgttggccgctgtggacgacggaacaatggaccca
gtgttacccgcccgtttacagccgtacgaggcacacctgccatacgtgctgcaggtcatg
gcagactacggcctagccgggtttgggtgtatcggactttgcagtggtcgttttcgtcca
ccgctggcttcgccgcgcgatgctgccagtgaagatgctgatcatggcatgcaagcacga
cacagcgccagcttggtcgacaaccttccaccggacatggtctggaacgtgcccgtcaaa
cggcagaccgactgtcacctagaggtggatgtgtggttacccagggatctgcatccagca
catcttcacggtgagcaggaaccaactgatctggagcgccacgttccgtcgcttcggctc
atctgggagagcgaacgcagacgtcgatgcctctcttcgtggcgccagatgtgggtccct
attgcacactgtcgactggagcgcgaggtgcaacccatggacactggtttgaagcagcgc
cttgggatggtggtttctcaggcactacgcaaacgtgcaggagcagggaatcggcaacat
caagaacggaggaacgcaatcgccctgaacgatgaaacgagccaagctgatgatctcgcc
agtgcgcttgcagctcagtttggctatgcagttgaatccagcactgcagagcgccttcat
ccagagtcggatttggaggatgaagtgctctggaactggatggagcagaactaccgaact
ggagtgggtgcagcgaacggtcagccggtggacacttcctttgcatcagcgtacgcactg
gacacatccgtttacgaagacgaagagcagcccgtggatgaagtcgctacccagaaggaa
tgcgcagacattctggaatgttcgctgcctttgaatgaaacaccagggctaggggcggag
acggcaaaggtggcaacctcgccggcgtcattggtgcatcgtcaagacacggagctggga
ctcagcccgccttgttccccgtcggtcgccccaagtaggacgcctgttccagagtccgtg
ttggcttctgcatcggaactacagcctggtcacgaatcggaggcggttcaagcacaggcg
tcgacgacgtcgaggccccgacaggcgagctggtgtctggcggctttccatctcgagcga
tcaaacgtatcgccagcgaattggttcatgattccagatcagcacccgccttttcccttc
aagtcagaatggggcgttgctcagcagaaacccttttacagcgccattgaggacaaagct
ttcacgacaagcgggtcgagcgtacgctggtttccgcagacgcctctttggcgagaggtc
gcctgtcgggctttcagttccgactcggcggcggatgctgctggcctccaaacctggcgg
acaccgctgagcttgccgcctttgccacagcacatcgagcgaattgaacggtttcgaaag
cgaagcaggctcctgggagcatcaagaaaggtcattgaggtgcggatggatagttacggt
cgcgaggtgcgcactgtagcggtgctcgcagcagcgaagcatgcggtttcgaattcagta
accgtaacagaagatgcactggccaatgcgaggccggctagcgtcggcatcaaggcggaa
actgcaccgcggtcgtgccgctcaccaaggagcattgagcttggaactagtccaaaagcc
tggcgctctccatggaccagggcgtccgagcttgtcgacgccccggagtcccgaagcgtg
gcgatagagaccccagcgtccgttgattccgtgcaacaaggagcgcctcgtgcgcatcgc
gaagaggagctacccgctttgcccgctgatcaagcgtatggcgctgcaagcgcagctgca
cctggccccatggaggcagcgtgcagtagcgagaacggtagcgcgtccaaatgggtgtcc
cccgagttgttgtcagcaagcagctctgcggattctcagcacactgaatggaaagcaacg
tcggacgttgacgcacaccgaacgaccgccctacccacgcaaacggatcgtaactggcaa
ctgcatggagtgcaagcgtcgctcgatgcctatgatacgcgggtgcattcgagctcggca
catgcatcagaagtgcgctccacacgtagcccagtactggatccgtcaccgtacccaaat
tcggacccgagtctagcacaatcatcagaggcgcgctgcacgaacagccaagtgctggat
ccgttaccacacccagactcggacctgacgcttcgtcgtccagccagagagccgctatcg
tcggcggcagcgcaacgatgtcgcacgttcagcgacgaaactggtgccatggacccgctc
ccagacacggttgctgaactcgaagacgacgaagcacaactggtgccgctcgttcgaccg
gcttcgcctcgttacgacgagccgtccgagttctggagcgacgctccgcatgctgcgccc
gctttctccagcgctgcgatacgatcgttgagaacggatcgcgagaaacgctcccggggg
cgactctcggatatcacgggcccatcacagatatccagcggcagagactcctcggggatt
agtggagagcccgcaccacttgagccgctggcgcttcaccatcagtacggcaccgaaacc
tttcgagtactagccatagagtcactctcgatcaatcgtcgagagcagcgccctgacgct
cttcaggatccgctggctgcaatcggactcgtcttccggggcgatgactccgatgccgat
cgtcatatcatgctcgtgaacagcgctttacgcacaaacactggagacgatgcgagtgct
gcgcttaccgagcggacggcgctcggcctggtgccaaccacgggatacacgttgcggcct
actcgagtcgtggtgctgggctcggaagcggcgctgctgcggcaacttgcgctgctctgt
cgtcatctggacccggatatcctggtatcgtattcgttgcgcgatggagggatcggttat
ctgctgcagcgagcaggcgttctgggttatgacttggcttcggggctgtctcgggtagca
ctcggcgttcatgacccgaaaaccgagcggcagtggagcctgtcgatgcacccgtgggag
acggatactgcctccggtggtatccgcctgctgggtcgatacgttctggacgtatggcgg
atcatgcaatcggaggtcaagctgtcgaactacacgttctatcgtgttgtggaggagatt
ctcggacgccggatgccccgcttaccgtggtctacccaacgagactggttcacgcggggt
accgccgccgactgtcgccgagccctcgaactggttttgtttcgcgctgcctggacgctg
gacctccttgaagcgctggatatcctcggacgctcggccgagatggccaccagctacggc
atcgacctgttatctgtgtttcttcggggcagtcagtatcgagtggagagtctgatggcg
cgactcgcgcacgcccaggggtacgtgctggtctcgcctactgctgcacaggtccgatgt
caaccggcaacggccttcattccgctcgttatggagcccgaagcccgctactacagcgat
ccggtcctggtgctagactttcagtcgctttacccgtcgatgatcatcgcccacaacatc
tgcttttcaacctgtctggggcgcgtcctgctcgatagcgaaagcgactggtgcactttt
gcaagcggcattccgcgcgtgttcggtgtgctggaagcgtacagccccgactggatcggt
ctcgtagaggcgctcgcaacagacgcaacaccggacgtggaagcgttgctaacggtgctt
ccgaaccagacagttttcgtgaagcctcgggtacggcatggcatcttgccgctgatgcta
cgagagatactggaaacgcggatgatgctcaaaggcggcatggaggccatcgagaagcaa
caccgcaccgcaccggtacccgaagcggaacgtcttcgcttacaggccatctatcgaatg
ctgaatgctcgtcagtttgcgatgaagtatatcgccaatgtgacatatgggtatacatct
gcgtcgttttcgggacgcatgccctgtgcagagatcgccgacgcgatcgtcagtgccggt
cgggaggccatggagcgcatcgtagccaccgtggagcgcctctggggagcatcgcatgga
gcacgggtcgtctatggcgatacggactctatttttgtgctggtgccgggcgcttctcgt
gaagtcgcctttcagctgggtcgtgccatggcggagcagtgcagtgcgctatttccagac
ccggtccgactcaagctcgaaaaggtatacagccgttcgttgctgctggcgaagaagcgc
tatgttggttgggcgtacgagtcagagaaccagctgatgggaatgcttgatgcaaagggt
atcgagacggttcggcgcgactcgtgtggtctagttcagaagattctcgagcgcgcgctg
cgcttactcttcaccggtgatcaggatctatcgcccatcagacgctatgtgcagcggcaa
cttcagcgagtccttcagaatcgcttcgattttcgggatgctatctttttcaaagaggtt
caactgggtcgttacaaacccggctacgaaccgcctgcagcgctcgttgccctgcgacag
ctggatcaggatccagcagcagtgccggcgtttcgggaacgtgtcccttacgtggtaatc
tatggagagcccggaagtacgctgcgcgaactcgtcgtggacccggggcagtttctagaa
gcgcggcgacaagggcgcatccttcgcttgaacacgcaatactatgtgcgaaagcagatc
ttaccggctttggagcgctgcttttcgctgatgggtgtggatgttttcagttggttccag
caggtgcctcgagttgcgtaccgtgctccacacagtcggggcgttccgcttggagcgcac
cagaaaagccgcatagagcactaccttcccggtttctgcgccgtatgtggtgagagctgt
gccccacaaacagaggtttgtcgtgtctgcctcacacgcattcctgatagcctcgcgatc
gtccagcggaaattgcacactgcacagcagcgtctctttcgtcttcaggagctctgccta
cgttgcattggcgaaggtatcaccgcaagcgaatgcagggatcgcccgggcgagccatta
agcgcaggtgcttgtttggcgccggagcagcaccatcagcaccaatcgtgttggacgcaa
tgctggtatccgccttgtgcacatatagaatgtgcgctgcttgtagagcgagacaaggcc
tctttgacgaccgccacatacatgcatgctttgggggaactctctggctag
DBGET
integrated database retrieval system
