Cyanidioschyzon merolae: CYME_CMR155C
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Entry
CYME_CMR155C CDS
T00175
Name
(RefSeq) similar to TATA element modulatory factor
KO
K20286
TATA element modulatory factor
Organism
cme
Cyanidioschyzon merolae
Brite
KEGG Orthology (KO) [BR:
cme00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cme04131
]
CYME_CMR155C
Membrane trafficking [BR:
cme04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
CYME_CMR155C
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMF_TATA_bd
Fez1
Filament
Yop-YscD_ppl_2nd
NPV_P10
DUF1664
Motif
Other DBs
NCBI-GeneID:
16996782
NCBI-ProteinID:
XP_005538443
UniProt:
M1VGS6
LinkDB
All DBs
Position
18:complement(387176..389116)
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AA seq
646 aa
AA seq
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MRRAVADEEEWEDVAAPEITEPALSATAEVRGRSPEASHEQDSGASFDSKTLRSETDDAS
RAHVLAATGAEEGHSPRTDAKERDSGAGSYGSQVGPGRLPSPRPSLEAAENAQELYQEAQ
RLSKLVYERDQQVQAQRKRIRELERLVDSERSRANSTALQLRKEEERVQECQARLQAQLA
QLKQAEEQRKHCEQEHVQRSELQTLETRLHELRDEHEAELRSLTRRLAMKAQEQLEIAKS
EYRDRLEVLQSQLEHVKALLERTQQEQGRRERQWREEVAQARAHVSELEQQNEELSRSVS
EATKPLMRQIQVLHEQLRQRSAGEATIQERLEQQVLQIRAELEAANVARAALLEEHTRLD
TRARELEWKLRDFVALGSTLREQRVAAAKVLSQIRTCCAQLRRTLFTFREDWLRLQRAYE
SEARETAHALGGLRRRLQIERRQLMTTPSLCEAVPTASQMQPGEASAVQTVRDTPTASLV
AGETLDNVSAPEDAVDERHSTPGSSVSAGELLLSGSLPNLVQWTEVQSHLRHRANVIRSL
QTELMRREDIIQNLTSEMAQLNEKLESQAAQVKRLDDEIRRMHEREQALLELLGEKEELV
QELREDIADMKGIFHEQLEELARQLESARTVACPATSTTTNPSSEV
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atgcgacgagcagttgctgacgaggaggaatgggaagacgttgctgcgcccgagataacg
gaacccgcgttgtctgcaaccgcagaggtgcgtggacgttcaccggaagcgtcccatgag
caggattctggcgcttcgttcgactcgaaaacgctgcgcagcgagaccgatgatgcttca
agagcgcacgttcttgctgcgaccggtgctgaagaaggccacagtccgcgaactgatgca
aaggagcgtgactctggagcgggcagctacggttcgcaggtcggaccggggcggctcccg
agtccacgcccttctttggaggccgcagagaacgcacaggagctatatcaggaagcgcag
cgtctatccaagctcgtttacgaacgagatcagcaagtacaagcccagagaaaacgtata
cgtgaactcgaacgtcttgtcgactcggagcgtagccgagcgaatagcactgcactccag
ctgcgaaaggaggaagagcgcgttcaggaatgccaggctcgtctccaggcacaactggcg
cagttgaaacaagcagaagagcaacgaaagcattgcgagcaggaacacgtccagcggtct
gagctgcagacgctagagactagacttcacgagctccgcgacgaacacgaggccgagctg
cgaagcctgactaggcgtctggccatgaaagcgcaggaacagcttgaaatagccaagagt
gagtacagggatcggctcgaagttctgcagtcccagctcgaacatgtgaaggctctcctc
gagcgaacacagcaggaacaggggcggcgagagcgtcagtggcgcgaggaagtcgcacaa
gctcgtgcgcatgtgtctgagttggaacaacagaatgaagagctctccaggagcgtctcc
gaggcgacgaaaccactcatgcgacaaattcaggtactgcacgaacaactccgtcagcgt
agtgccggcgaagcgaccatccaagagcggctcgaacagcaggttctccagatccgagca
gaactggaggcagcaaatgtagcccgagcggcattactcgaagagcatacgcgactcgac
acacgtgcacgcgagctcgaatggaaactccgtgactttgtcgccttggggtcgacgcta
cgcgaacagcgcgtcgctgcggcaaaagtgctcagccagatccgcacgtgttgcgctcag
ctacgcaggaccctcttcacttttcgagaagactggttgcggcttcagcgtgcttatgag
tctgaggcacgagaaaccgcccacgctttgggcggcttgcggagaaggcttcaaatcgaa
cgcaggcagctgatgacgacgccctctctctgcgaagccgttccgacagcatcgcaaatg
caacctggtgaagcgtcggcagtgcagacagttcgcgacacaccaacggcctcgttggtg
gcaggggaaacacttgacaacgtttccgcgcccgaggacgcagtggacgaaaggcacagt
acgcctggctcttcagtaagtgctggagagttgctgctttcgggctcgctaccaaacctc
gtgcagtggacggaagttcagtcgcacctgcgtcaccgcgcgaatgtgattcgcagtctc
caaacggaacttatgcgacgcgaagacattattcagaacttgacgagcgagatggcacaa
cttaacgagaaacttgaatcacaggctgcccaagtgaagcgtctggacgatgaaatccgg
cggatgcatgaacgcgagcaggcccttctcgagctgctcggggagaaagaggagctcgtc
caggaactgcgcgaagatatcgctgatatgaagggcatctttcatgagcagctagaagag
cttgcaagacaattggagtccgctcgtacagttgcgtgccctgcaacgtcaacgacaacg
aaccccagctcagaggtctag
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