Cyanidioschyzon merolae: CYME_CMR159C
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Entry
CYME_CMR159C CDS
T00175
Name
(RefSeq) similar to COP9 signalosome subunit Csn2
KO
K12176
COP9 signalosome complex subunit 2
Organism
cme
Cyanidioschyzon merolae
Brite
KEGG Orthology (KO) [BR:
cme00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cme04121
]
CYME_CMR159C
Ubiquitin system [BR:
cme04121
]
Deubiquitinating enzyme (DUB)
UBL-specific proteases (ULPs)
COP9 signalosome (CSN) complex
CYME_CMR159C
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GFIT
Motif
Pfam:
PCI
TPR_12
TPR_MalT
Sigma70_r4
HTH_20
Motif
Other DBs
NCBI-GeneID:
16996832
NCBI-ProteinID:
XP_005538445
UniProt:
M1VB25
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Position
18:complement(394633..396498)
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AA seq
621 aa
AA seq
DB search
MGTPAGTPPESSWSQVRSSTPEYAVLLENLYYDGESLQERGDLSGAAALYERLLSLEQPQ
RESEWGVRALHQLVIISVFERKDYSRAQALHERLLCYFHTAVPRTLVEFVISQLLDSLAS
ETYVPASVLERLLQATIDALDAAGVSLNNRLRFRTVVRLGQLYLDTGALWRLSTLLRRLY
RHAGIRLGADPALEPKSASLSGQVSAPRQPGEQLLIGALSGSQLLELFALDMQLQLVLWG
KLASVPFQFPQAMEYRLRHTAQDTSPAASIGRRNRDFVATMPPDSSAVPRTVGVALSPPG
RPGVPIAADDGFYASRLWRLYQEAMRLKSVLKGVLVSPRTLAIIRTCGGKLYLAQGCVTE
AAREFYEAFRHYEEVGAPERFAVLRYLVLANLLSGNTVDLFTAPELQTYGSEPHMRALGD
MIHAYEKDDLVLFESSLEKDRAMIEDTFLRPFTETLSSRLWQRAVLRAVHPYRAITLASL
AKRLGVTREGDSIAQVEHAVVQLISDGRLIGRIDQTQDVLLVSWRQRTTGLLSTDSPATG
TETEFGSSATSGVPAWDDSFVNPTRYSESSYPVSVADYRQIRDTDLDADRVDILLTTWSQ
RLKRVREQFAQLGADIPRVAS
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atgggaacaccagctggtacaccgccagagtcaagttggagccaagtgcgcagctcgaca
ccagagtacgccgtgcttctggagaacctgtactatgacggggagagcctgcaggaacgc
ggggatctcagcggagcggcagccttatacgagcgactgctctccctggagcaaccacag
agagaaagcgagtggggcgttcgtgctcttcaccagttagtcattatcagcgtctttgaa
agaaaggactatagtagggcacaagcgctccatgagcgtctcctctgctacttccacaca
gcggtcccgcgtacgctggtagagttcgtgatcagccagctgctggactcgctggcctcg
gagacgtacgttcctgcgagcgtactggagcgtttgcttcaggctaccatagacgctctc
gacgcagctggtgtttccctgaataatcgattgcggtttcgtaccgtggtgcgccttggg
cagctgtatctggacacgggggccttgtggcggctgagcacgcttctgcgccgcttgtac
cgccacgctggtatacggctgggcgccgacccagcgctggagcccaagtcagcctcgctg
agcgggcaagtgagcgctccacgacaaccgggcgagcagctgctgataggtgcgctctct
ggctctcagctactggaattgtttgcgttggacatgcagctgcagctcgttctttggggc
aagctcgcatcagtaccattccagtttccacaagccatggagtaccggttgcgacataca
gctcaggatacgtccccggccgcatcgataggtcgaaggaaccgcgactttgtagcgaca
atgcctccggactcgtccgcagtacctcgtacggtgggcgtagcactgagcccgcctggt
agaccgggcgtaccgatcgcagcagacgacggattctacgcttctcgtctctggcgactg
tatcaagaggccatgcgcttgaaaagcgtgcttaaaggggttcttgtgagcccgcgcacc
ctagcgatcattcggacctgcggcggcaagttgtatctggcacagggctgcgtcacggag
gccgcacgggagttctacgaggcattccgccattatgaggaggttggtgcgccggaacgc
ttcgccgttctacggtatcttgttttagcgaacctgctttcgggaaatacagtggacttg
ttcacagccccggaattgcagacctacggttcggaaccccacatgcgggccctgggtgat
atgattcatgcttacgagaaggatgatctggtgctgttcgaatctagtctcgaaaaggat
cgtgcaatgatcgaagatacgtttctgcgtccgttcactgaaacactgtcgagtcgcctg
tggcagcgggctgtcttgcgagccgtccacccgtatagagcgatcacactggcaagtttg
gcgaagcgccttggcgtaacgagggaaggcgatagcatcgcgcaagtcgagcacgctgtc
gtgcagctgatttcggatggccgcctcatcggacgcattgatcaaacgcaagacgttttg
ctggtctcgtggcggcagcgaacgacaggtctgctttccacagattctccagctacaggc
acagagactgaatttggttcttcagcgacatctggagttcccgcctgggacgacagcttc
gtcaatccgacgcggtactcagaatcgagctatcccgtctctgtggccgactatcggcag
attcgagacacagacctcgatgctgatcgtgtcgatatcttgttgacgacgtggtcgcaa
cggttgaagcgcgtgcgggaacagtttgcgcaactcggtgccgatatcccgcgagtcgct
tcctaa
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