KEGG   Cyanidioschyzon merolae: CYME_CMR161C
Entry
CYME_CMR161C      CDS       T00175                                 
Name
(RefSeq) WD-repeat protein
  KO
K11801  DDB1- and CUL4-associated factor 11
Organism
cme  Cyanidioschyzon merolae
Brite
KEGG Orthology (KO) [BR:cme00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:cme04121]
    CYME_CMR161C
Ubiquitin system [BR:cme04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     CYME_CMR161C
SSDB
Motif
Pfam: WD40 WD40_CDC20-Fz WD40_Prp19 Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd WDR55 Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_TEP1_C Beta-prop_CAF1B_HIR1 Beta-prop_WDR90_POC16_2nd Beta-prop_SCAP EIF3I PQQ_3 Cytochrom_D1
Other DBs
NCBI-GeneID: 16996846
NCBI-ProteinID: XP_005538447
UniProt: M1UW89
LinkDB
Position
18:399284..401635
AA seq 783 aa
MPRLRGRGSSRSEETASHESTPTGSTAATPASEDGSGTSRSAANESDEWSASALGAALVQ
GLRALLEDVSLSFQTESSGERPSQRRRSRRQHLQFQRYASSRLAPNVGVNRAAIQADIAF
PQALWQLDESGRERERSIEDIERMEAVLTYLSYWLGERNGSRVVYGSQQRFRSPLHETDA
ALRPVWAIRLGSVPDALRARECTAEAVPMPGLATKSRLWTEPPQLLAECHRERLEQFLHL
LLPPTTESNLPLDAQYFSSFWYRFLFLEKELLRSVDVRQPTAPPVHYSQPLSDGDPRAAS
EAAGISAATSTDTCSSFQQPWSRLYPGACSTRAPGAASRSLPCGFHDAAMASLQEHYVPQ
FPLRKLDVYSARAYGCRFFDEGRLLVTSCQDRRLRLYDTSALDVFEWCGGSPEHSLLERW
ERPPSEQDCRARLPVSEVIARDLRWTVTDVDWSRQADGTSWLAYASITPRVYLVRLDAVE
AQQALSFAAPANLVLDQSSSETGAAAGWTNLLDAENSYGLGIWSVRFRPDGSELVAGASH
TGHVFGDLVVYRLERQAPVASLRAHQDDVNSVAVAGANLILSAADDAYIHVWDRRDLRRP
CGSFVGHTEGITHVSWRGEEVAPQLRCATDLLDQRYVVSIGKDQRCKLWDIRLLREASQV
ERPRPTHYDYRWNDMVNPPLDNRRTLRGDNSLYTFIGMRVLSTLIRAYFSPLSTTSGRYI
YTGSQDGRICLFDTVSGMPLTALRGHEAAVREMSWSPRLPGVLVSAGWDGQALIWRPAGV
EDH
NT seq 2352 nt   +upstreamnt  +downstreamnt
atgccacgcctcagaggcagaggaagctctcggtcggaggagactgcatcacacgaaagt
acgccaacagggagcacggcagctacaccagctagcgaggacggcagtggcacgtcacgc
tcagcagcgaacgagtcggacgagtggagcgcgagcgcactcggtgcggcacttgttcag
ggactgcgagcactcctcgaagacgtgtccctaagctttcaaaccgagtcaagtggtgag
cgacctagtcaacggcgccgttcgcgtcgccaacacctgcagttccaacgctatgcatcg
agtcgtctggctccgaacgtcggggtgaaccgtgccgctatccaagcggatatcgctttt
ccacaagcgctctggcagctggatgagtcaggacgtgaacgagaacgctcgattgaagac
atcgagagaatggaagctgttttgacgtacttgagctactggctaggcgagcgcaacgga
agtcgcgtggtgtacggctcgcagcagcgtttccggagcccgttgcatgaaacggacgct
gctctgcgcccagtttgggcgattcgcctcggctcggttcctgacgccttgagagcgcgt
gaatgtaccgcagaggcggtcccaatgccgggtctagcaaccaagagtcgtctgtggacc
gagccgccgcagctgctcgcggaatgtcatcgcgagcgtctggaacagttcctgcatctc
ttgctgccgccgacaactgagtcgaacctgccactggatgctcaatatttttcatctttc
tggtatcgatttttatttctagagaaggagctcctgcgctctgtggacgttcgtcagcca
acggcacctccggtgcattactcacagccgctcagcgacggtgatccgcgagctgcctct
gaggccgctgggatcagtgcagctacctctaccgacacttgttcaagttttcagcagcct
tggtcgcgactttatccaggtgcatgtagtacacgagcgcccggagctgcaagtcgatcc
ctaccctgtggattccatgacgctgcgatggcgtctctgcaggagcactatgttccgcag
tttccgctgcgcaaactcgatgtctactcagcgagagcgtacgggtgtcgcttttttgat
gaaggaagactactcgtaacgagttgccaggatcgacgcctccgcttgtacgacaccagt
gctctggatgtgttcgagtggtgcggcggttcaccggagcactcgcttttggagcgatgg
gagcgacctccttcggagcaggattgtcgcgctcgcttgccggtaagcgaggtgatcgct
cgggaccttcgctggaccgtaaccgacgtagactggtctcgacaagcggacggcaccagt
tggctcgcgtacgcttcgatcacgccacgtgtttatctggttcggttggatgcagtagag
gcgcagcaggcgctgagttttgcggcacctgcgaatctcgtccttgaccagagcagcagc
gaaaccggtgcagcagccggctggactaacttgcttgatgcagagaactcctacggcctt
gggatatggagtgttcgttttcgacctgatggatcggaactggtggcgggtgccagccac
acgggtcatgttttcggtgatctcgtcgtttatcgcctggagcggcaagcgccggtggca
tcactgcgagctcaccaggatgacgtgaacagcgtggcggtagcgggggcaaacctcatc
ctcagtgctgcggatgacgcctatattcacgtatgggatcgtcgagaccttcgccggcct
tgcggctcctttgtgggccacaccgagggtatcacacacgtgtcgtggcgtggagaagag
gtcgctccgcaactccgatgcgcaacggacctgcttgaccagcgctatgtggtgagcatc
ggcaaagaccagcgatgcaagctatgggatattcgtttgctgcgagaagcgagtcaggtc
gagcggccgcgtccaacgcattacgactaccgttggaacgatatggtgaatccgccactc
gataatcgaagaacccttcgcggggataactcgctttacacattcattggtatgcgggtt
ttgagtaccctgattcgagcctacttttcgcctctgtctacaacgagtgggcgatacatt
tacaccggaagccaagatgggcgcatttgtctctttgatacggtgagcggcatgccgctc
acggcactgcgtggacacgaagccgcagttcgagaaatgagttggagtccgcgcctgccc
ggagtacttgtcagcgctggttgggatggtcaggcgctcatctggcgaccggctggtgtt
gaagatcactga

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