Cyanidioschyzon merolae: CYME_CMR200C
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Entry
CYME_CMR200C CDS
T00175
Name
(RefSeq) similar to Golgi associated retrograde protein complex component VPS53
KO
K20299
vacuolar protein sorting-associated protein 53
Organism
cme
Cyanidioschyzon merolae
Brite
KEGG Orthology (KO) [BR:
cme00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cme04131
]
CYME_CMR200C
Membrane trafficking [BR:
cme04131
]
Protein recycling
Others
EARP complex
CYME_CMR200C
Endosome - Golgi transport
Tethering complex
GARP complex
CYME_CMR200C
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Vps53_N
VPS53_C
Sec6
LppA
SSP160
Nup49_C
Motif
Other DBs
NCBI-GeneID:
16996697
NCBI-ProteinID:
XP_005538476
UniProt:
M1V6S2
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Position
18:complement(483455..486103)
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AA seq
882 aa
AA seq
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MTAQELSASNVLSRLSHEDAAVAQTATEAADSSLPDDVPEEPGAEPVTTYINRHFPSLDT
LDQLETHLDELRTKLRALDAELVHAVRHQLHVRRQGAAVIKHAQERSKLLDAALAEVERS
MRTAAETLTESAEQFRPIANVRHNLLQARAHLKAFVRLAKALRDMESTMAAQDMTETAEH
VRQAREALAELHTLPAIPLLDELQQRYRSLEQHLSRMVVALFGETSDTSQRAEYRAGCIL
ADALENGTREAVLNAFVVRRVRLYEEVFGARDSDLTPIETFERSFAWIRRELRSLDEHWS
AVFPESWRVPMALSGALSDALRRIAHRDLEEGKVDVAQLLRALQITLEFEAEMVRRLNTP
LTWNLSSVFEPYMGAYVTLENQRLREAIDGALEKETWLVPALGQRAAAAAAAAAPEYPDE
SIVLPSAKTLFIEIKRCMKRCGVLTTSQTYFNLHKAFKKHLRDYASAMERELLRIRSTAT
TTTTTTTTSNSSTSTNSNSKSTTSTAAVSADAGITESQEQVLTSVCSLSLTAEYCARTTE
QLAETIRQAVDAAFTDSIRMNEERDEFRAIAGRAGKVLVALTCAWALEPALHTLQAQRWS
QVTAVGDVSPAVTALVTKLERVSRHVGRQLLPLFFRFYLDKLSGSVLERFTETLFRCKPL
SDAAAQQLLLDTQFLKEGLLKLIDCRSPSVERDDPWFSSYQRYVRSECGRAETMLKVRLA
SDDSAVDAFEALMPEAEPSALRQILEWKGLPPLEAARQVVQYAERTGDPVLVHKARSEME
HLDTSGHRAANLQRQSKALFERSTTTSALVVDNAMAGRSVPPGSFSDTSTSLRGDASKPS
TEVRAFLNRLGERLREVRLGDKLESTLDAVGRSRDRRRRSNS
NT seq
2649 nt
NT seq
+upstream
nt +downstream
nt
atgacagcacaagaactatctgcatcaaatgtgctgtctcgattgagtcacgaggacgcc
gcggtagcgcaaacagctacagaagcggcagacagcagcctcccggacgacgtgcccgag
gagcctggtgctgagcccgttaccacctacatcaaccgccactttccttctctagatacg
cttgatcaactggaaacgcatctagatgagctgcggacaaagctgcgtgctttggatgcc
gagctggtgcacgccgtgcgacaccaactgcacgtgcgacgacagggcgctgcggtaatc
aaacacgcccaggagcgcagcaaactcctagacgcagcgctggccgaggtcgaacgctct
atgcgcacagcagccgagactctaactgagtctgcggaacagtttcgaccaatcgcgaac
gtgcgacacaatctgttgcaggcgcgggcccacttgaaggcctttgtgcgcctcgccaaa
gcgctgcgggacatggaaagcaccatggctgcacaggacatgaccgaaaccgcagaacat
gtgcgacaagcgcgggaggcgttggccgagctccacacacttccagcgataccgctcctt
gacgaactacagcaacgctatcgttcgctggagcaacacctcagtcgcatggtggtagcg
cttttcggggagacctcggacaccagccagcgagctgaataccgagctggctgcatcttg
gcagacgcactagagaacggcacgcgcgaggcggtgctaaacgctttcgtcgtacgccgt
gtgcgcttgtacgaagaggttttcggagcgcgtgactcggaccttacgcccatagagacg
tttgagcgaagctttgcgtggatcagacgagaactgcgttcgttagacgagcactggtca
gcggtgtttcccgaatcctggcgagtgccgatggcgctgtcgggggctctgagcgatgcg
cttcgacgcattgctcaccgtgacctcgaagagggcaaagtggatgtcgcccaactgctt
cgtgccctgcagatcacgcttgagttcgaggccgagatggtgcgtcggctgaacacgccg
ctcacctggaacttgagcagtgtgttcgagccctacatgggcgcctacgtgactctggag
aatcaacgcttgcgcgaggctatcgacggagcgctcgaaaaagagacctggctggtaccg
gcgctgggccagcgagcagcagcagcagcagcagcagcagcaccggagtaccccgacgaa
agcattgtgcttccgagcgccaaaacgctgttcatcgaaatcaaacgctgcatgaaacgt
tgtggcgtcttgacgacaagccagacctatttcaatctccacaaagcattcaaaaagcac
ctgcgcgattacgcctctgcgatggaacgcgagctgcttcgcattcgctcaactgccacc
accaccaccactactactactactagtaatagtagtactagtaccaacagtaacagtaag
agcacgacatcgacagcagctgtttcagcagatgccgggatcacggaatcacaggagcaa
gtcttaacgagtgtctgctcgctatcgctcaccgcggagtactgtgcgcgtacgacggag
cagctggcggagacgattcgacaagcggtcgatgccgccttcaccgacagcatccgaatg
aacgaagagcgggatgagttccgagctattgccggtcgagcaggtaaagtgctggtggcg
cttacctgtgcttgggcgttggagccggcgctgcacacactacaggcgcagcgctggtcc
caagtcactgccgtcggtgacgtgagtccggcggtgacggcgctggtgaccaagctggaa
cgcgtcagccgacacgtgggacgacaactcctgccgctcttttttcgtttctatctggac
aaactcagtggtagtgttctggaacgcttcacggagacgctgtttcgatgcaaaccgctg
agcgatgcggcagctcaacagttgcttctggatacgcagttcctcaaggagggcctcctg
aagctcatagactgccgttcaccgagcgtagaacgcgacgatccctggttcagcagctac
cagcgctacgttcgctctgaatgtggtcgagcggaaaccatgctcaaagtgcgcctggcg
agcgacgacagcgctgtggatgccttcgaagcgctgatgccggaagcggaacccagtgcc
ctgcggcagattttggaatggaagggtcttccgccgctggaagctgctcgacaagtagtg
cagtacgcagagcgaacaggtgatccggtgctcgtacacaaggcgcgttccgaaatggag
cacctggataccagcgggcatcgtgcggcgaacctgcagcggcaatcgaaagcattgttt
gagcgttcgacgacgacaagtgcacttgtcgtggataatgcgatggctggacggagcgtg
ccgcccggcagcttcagcgatacgagcacttcgctccgaggtgatgcgagcaaaccatcg
acagaagttcgggcgttcctgaaccggttaggtgaacgccttcgggaggttcgtctcggt
gacaaactggagtcgacactggatgctgtcgggcgatcccgtgaccggcgacgacgcagc
aactcgtag
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