Cyanidioschyzon merolae: CYME_CMR360C
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Entry
CYME_CMR360C CDS
T00175
Name
(RefSeq) probable DNA polymerase epsilon, subunit C
KO
K02326
DNA polymerase epsilon subunit 3 [EC:
2.7.7.7
]
Organism
cme
Cyanidioschyzon merolae
Pathway
cme03030
DNA replication
cme03082
ATP-dependent chromatin remodeling
cme03410
Base excision repair
cme03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cme00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CYME_CMR360C
03410 Base excision repair
CYME_CMR360C
03420 Nucleotide excision repair
CYME_CMR360C
09126 Chromosome
03082 ATP-dependent chromatin remodeling
CYME_CMR360C
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cme03032
]
CYME_CMR360C
03036 Chromosome and associated proteins [BR:
cme03036
]
CYME_CMR360C
03400 DNA repair and recombination proteins [BR:
cme03400
]
CYME_CMR360C
Enzymes [BR:
cme01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CYME_CMR360C
DNA replication proteins [BR:
cme03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase epsilon complex
CYME_CMR360C
Chromosome and associated proteins [BR:
cme03036
]
Eukaryotic type
Chromatin remodeling factors
CHRAC complex
CYME_CMR360C
DNA repair and recombination proteins [BR:
cme03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase epsilon complex
CYME_CMR360C
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CBFD_NFYB_HMF
DUF7348
CSRNP_N
Motif
Other DBs
NCBI-GeneID:
16997015
NCBI-ProteinID:
XP_005538593
UniProt:
M1VH22
LinkDB
All DBs
Position
18:872051..872560
Genome browser
AA seq
169 aa
AA seq
DB search
MSHLQIEIDESLRFPAATLKKIIRRKLDKLLSDELVPREDGASEARRVQLDKDAQLAFSA
AATVFVSYITAISTAVGAERKRTTLNMDDVIEALRRTEFEDFAVEVEQFVQNWRMLNERR
KAQARQARVERKRKEPENSDVENDDGAYASDMPQEDTEDPEEDDLIEGT
NT seq
510 nt
NT seq
+upstream
nt +downstream
nt
atgtctcatctgcagattgagatcgacgaatccctccgtttcccggcagcgaccttgaaa
aagatcatacgtcggaaactggacaagctgctgtctgatgagctggtcccgcgggaagac
ggcgcctccgaggctcgacgcgtccagctggacaaggacgcgcagttggccttctccgcc
gcagccaccgttttcgtgtcgtacattaccgcaatttcgactgcagttggggcagagcga
aaacgcaccacgttgaacatggatgacgttatagaagcgcttcggaggaccgagtttgag
gacttcgcggtcgaagtagagcagttcgttcaaaactggcgcatgctgaacgagcggcgc
aaggcgcaggcacggcaagcgcgggttgagcgcaagcggaaagagcctgaaaacagcgac
gtcgagaacgacgacggcgcatacgcttccgacatgccacaggaagacaccgaagatccc
gaagaggacgatctgatagagggtacctga
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