Cyanidioschyzon merolae: CYME_CMR371C
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Entry
CYME_CMR371C CDS
T00175
Name
(RefSeq) similar to rRNA processing protein 7
KO
K14545
ribosomal RNA-processing protein 7
Organism
cme
Cyanidioschyzon merolae
Pathway
cme03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cme00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
CYME_CMR371C
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cme03009
]
CYME_CMR371C
Ribosome biogenesis [BR:
cme03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
CYME_CMR371C
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP7
DUF5093
DUF4078
Motif
Other DBs
NCBI-GeneID:
16997009
NCBI-ProteinID:
XP_005538600
UniProt:
M1VBB4
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All DBs
Position
18:892375..893727
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AA seq
450 aa
AA seq
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MHKTKQQPPVPRQEPRQTLCETMQTPDLKTRPSKVLEASREPLSRSCRAALLWILPLRIR
GCDMWLPRSSCSLQQWALGCLQNSTNMDWEWNVVQVPLEKSVEGQVTAWRCLFYGRPTRP
EHVSSFVWRCLTQGRLPTALLEEDTAATHNAQLCGASTQKRQHDGSHAIADACNGQSVTE
LLRLVLVFWNLPMGTRREDLEEACSSAGPVRWAFIEHSDSAETKFKTENVLEKEKAFRIR
PNSAVGEPAVVRGYVCFESPEDAQRTLNSPDELKLSALSRRTIPKLKQFLPVQLRGALEV
NSFPHWAWLRFKHDHLADIRGLEATCDRIMAAYEQQVRKIQRDQERKRCLVDEDGFTLVV
PRTHKQQHVNNDDKRSRSGNANPLYAGAPQNSRGESVIENVSETKAAPVGFYRFQRDELK
KRELAELRAQFERDRHRLHSLRATRQTFLS
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgcacaagacgaaacagcagccgccggtgcctcgccaggaaccacgacagaccttgtgt
gagaccatgcaaaccccagatctaaagactcgtcctagcaaggtcctagaggcgtctcgt
gagccgctcagcagaagctgccgagctgcgcttctgtggatattgccattgcggatacgt
ggatgcgatatgtggctgccgcgctcgagttgcagtctacaacagtgggcgctcggctgc
ttgcagaacagtaccaacatggactgggaatggaacgtggttcaagttccgttggagaag
tctgttgaaggacaagtgacggcttggcgatgcttgttctatgggcggccgaccaggcca
gagcacgtgagcagctttgtctggcgatgcctgacacagggacgactgccgacggcactg
ctcgaagaggacaccgctgcgacgcacaacgctcagctgtgtggtgcttcgacccaaaag
cgacaacacgacgggagccatgcgatagctgacgcctgcaacgggcagtccgtgacggag
ctactgcgtttggtgctggtattctggaacttgccgatgggaacgcggcgagaggacctg
gaagaggcctgctcgagtgcgggcccagtgcgttgggcctttattgagcacagcgatagc
gcagagacaaagtttaagacggagaacgtcctcgagaaagagaaggcgtttcgcatacgg
ccaaatagtgcggtcggagagccagcggtcgttcgtgggtatgtgtgtttcgagagccca
gaggatgcacagcggactctgaactcaccagacgagcttaagctatccgctttatcgcgc
cggacgattcccaagctgaaacagtttcttccggttcagctgcgaggcgcgctggaggtc
aatagtttcccccactgggcctggttgcgattcaaacatgaccaccttgcggatatccgc
ggcctcgaggcaacgtgcgatcgcatcatggcagcatatgagcaacaagtacgtaagata
cagcgagatcaggagcggaaacgatgcttggtcgacgaggatggctttacgctggtagtt
ccgcggacgcacaaacagcagcacgtgaacaacgacgacaagcgctctcgttctggtaat
gcgaacccgctatatgcaggtgctccgcagaactcgcgaggcgagtcagtgatcgaaaat
gtatcggaaacgaaagctgccccggtcgggttttatcgattccaacgggatgagctgaag
aagcgagagctcgccgagttgcgggcgcagtttgagcgcgaccgacaccgcttgcacagc
ctgcgagcaacccgacaaaccttcttgagttga
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