| Entry |
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| Name |
(RefSeq) ubiquitin-specific protease
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| KO |
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| Organism |
cme Cyanidioschyzon merolae
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:cme00001]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
CYME_CMR384C
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:cme01002]
CYME_CMR384C
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:cme04121]
CYME_CMR384C
Enzymes [BR:cme01000]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
CYME_CMR384C
Peptidases and inhibitors [BR:cme01002]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
CYME_CMR384C
Ubiquitin system [BR:cme04121]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
CYME_CMR384C
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
18:complement(927555..932324)
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| AA seq |
1589 aa
MRNQARRTPAQTGDMRQPRALGAPAAAEQQPLSASPQDVPMETMLPDSARIDKNTGGEQL
LDRSQSPETQPWVCVGDDELTFLGETTTQRRIAAPAAVRRQPLNPYFSLAAPDRGSEPYG
VRADDETGDCEGEDDVEEDSFVSSTSHGDGNCEDSDGTTDRLDHMRPLIRSGVVDVENAA
DSSTAGSFDEIGPARPMRSVPSVPESDFIDMELDTRNHRDLCSRLVSNAIVVFEYVLRDV
TKLLRSPVYRQNMDQRSGGGGVAGRLRVTSPWLEAFGFQWRLLIFPRGNGDPEGKFMSVF
LECSPLDSAREEQKKSWRSHARFQLALKNQTGVRPPIIRREMAGHMFSPRESDWGFQEFA
PCAELESPRFGWLIHDQIIFRVWIEFDKDSYTFSEQYDSKRETGFVGLRNQGATCYMNSL
LQTLYNIGAFRRAVYELPLPPLEGEAAEMVDRGLDSQAPASETSTGTPLTFALQRVFFDL
QHEDQCVTTKELTNAFGWTDADAFTQHDAQELNRLLCDTLEERMKGTPLEGTIARLFQGQ
AKRFIKCVHVDFESSHDECFYDLSLNVKGCKDLYDSFRKYIEVETLEGDNKYYADGFGLQ
DAKMGVQFIKLPPVLQLHLKRFEYDFNRDMMVKINDRYEFYPEIKLGEFVDGSTGADDEE
YIYVLHAVLVHMGDVHGGHYHAYIRPDPGTEEGSKIWFKFDDERVLRVTESEAVEDNFGA
PLAANGVPFPPQRRFTNAYMLQYVRKKDAHIYLGASTEADVPEALRQRIALEKELEEKKI
REREELRQMMNIRLITPAMQKGYHGLDWTDLNQGLILRVRRSMLLGEFKQMLLKEVLSPE
GIDASSALSNENFDGDACQRMLVWTFVARINQTIRPSRLLNDGNHEEPLERAWNDRAIAR
NNQAGASPGSMGSSIHAVNLFIDVRQEPVRLAALFDKRECLMLFKWYESADPPARESPEL
RVLGWDVVPMHLTMQNLVALLRERNVLPRVPLSELYWYEEVTSQDAKEIVSDVALSTARN
QLQSGDIIIFGRRSPIRQQTDQTARALNVNESGNNSEAPVSSAALLASILQDPDLSVEEQ
ANALYRHMFWDARDFLRHRCDVRLVPLTLQRMSGAAGDEPLTEEPSRGGSVASGPGSDQQ
NASEILLRNVSTQLTQYGLGTLLVAKLRNLHQQQQGLDLMQTCGVTAEDLRPSRVRFHRR
GFSSLDDFLYPRDSDPIPMSGARTRKILECIVSKQRIVKLFYEFIDTDAEAFEGKQEVTI
TWRPTPIDMIGRKILLALPLNATYGDLIRELESKLSVTERTALQSQYAGIRVHELWQKKI
IAGIVPLDRTVTVLGPDSNRENFEILAEPVPPHETPEELSRQGCVLIRVAHISKSASPPL
YGIQQDENYAAGGLATVNSFGLPFLLRVPSPEIHGTLPVQQLQTLIQERLQLPENEFRQW
RLLYVRPAERHPVIYLQPNGHEESERSAALGSPENTEKAHHGEQPVNHSETTKSGRPSTE
KISELAVSNGRQPSVAEGVTGAAVDTATMLSAEEKLLRRGLINLQDCIVENDDTYVHNFI
GLEHHDSNATKRRATSRLRYLNDKPLKIA |
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| NT seq |
4770 nt +upstreamnt +downstreamnt
atgaggaaccaagctcgtcggacacctgcgcaaacaggtgatatgcggcagcctcgggca
ctgggcgctcccgcggctgcggaacaacagccgttgagcgcttccccgcaagatgttcct
atggagacgatgttgcccgattcggcccggatagataagaatactggcggtgaacagttg
ttggatcgttcacaaagccccgagacacaaccgtgggtctgcgtcggtgacgatgagttg
acgttcctcggggaaacaacaacgcagcggcggatagccgcgcctgcagcagtccgaaga
cagcccctgaacccgtacttttccctagcagcaccagacaggggttccgagccctacggg
gttcgcgctgacgatgagacgggagactgcgaaggcgaggacgacgtggaggaggactcg
tttgtatcctcaaccagtcatggcgacggtaactgcgaagacagtgacggtacgaccgat
cgtctggatcatatgcggcctctgattcgttctggtgtggtggatgtggaaaatgctgcg
gattcctctaccgctggctccttcgatgagatcgggcccgcacgtccaatgcgcagcgtt
cccagtgtgccggagagcgactttatcgatatggagctggacacgcggaaccaccgggac
ctatgcagtagactcgtttccaatgctatcgttgttttcgaatatgtgctcagagatgtg
accaaactgctgcggagcccggtgtacagacagaatatggaccagcgtagtggaggtggt
ggcgtagccggtcgacttcgcgtcacatcgccttggctggaggcctttgggttccagtgg
cgcttgctgatttttccacgcggtaacggcgacccagagggaaaattcatgtctgttttt
ctggagtgtagcccgctcgactctgctagggaggagcagaaaaagagttggcgatcacat
gcgcgcttccagctcgcactgaagaatcaaactggagtgcgtccgccgattattcggcgt
gagatggctggacacatgttttcgccacgggagagtgactggggctttcaagagttcgcc
ccatgtgcagagttggaaagtccccgctttggatggctcattcacgatcagattatcttt
cgcgtctggatcgagttcgacaaggactcgtatactttcagtgagcagtacgactccaag
agagagacgggttttgtgggtctcaggaatcaaggcgcaacttgttatatgaactcccta
cttcagacgctgtacaacatcggggcgttccggcgcgcagtttatgagttgcccctgcca
ccgcttgaaggtgaagcggctgaaatggtggatcggggcctcgacagccaggcacctgca
tccgagacttctacggggacgccgctcacttttgcgctccagcgggtgttctttgatctt
caacatgaagaccaatgtgtgaccaccaaagagctaacaaacgctttcggttggacggac
gccgatgccttcacacagcacgatgcgcaggaactgaatcgactgctctgcgatacactg
gaggagcgcatgaaaggcacacctttggagggcacgatcgcgcgcctctttcagggtcag
gcgaagcgctttatcaaatgtgttcatgtcgattttgagagttcgcacgatgagtgcttc
tatgacctatctttgaacgtgaagggatgcaaggatctgtacgactcttttcggaagtac
atcgaggtggagacgttagagggcgacaacaagtactacgcggatggattcggtctacag
gatgcaaaaatgggggtccagttcatcaagttaccaccggttctccagcttcacttgaaa
agatttgagtacgacttcaatcgtgatatgatggtgaaaatcaacgatcgctatgaattc
tacccggaaatcaaactgggtgagtttgtagatggctccactggagccgacgatgaagaa
tacatttatgtgttgcatgcggttctagttcatatgggcgacgtacatggaggtcactac
cacgcctatatcaggccggaccctggaacggaggagggctctaagatttggttcaaattc
gatgacgaacgagtcctgcgcgttacggagtctgaagccgttgaagacaactttggggca
ccactcgcggcgaacggtgtaccctttccgccacaacgtcgctttaccaatgcttacatg
ctccagtacgttcgcaagaaggatgcgcacatttacttgggtgcgtccacagaggctgat
gtcccggaggcgttgcggcagcgaatcgctttggaaaaggagctggaagagaaaaagatt
cgcgaacgagaggagctgcgccagatgatgaacatccgcctgattacgccggcaatgcag
aagggctatcacggactggactggacggatctgaatcagggcctcattctacgggttcga
cgtagtatgcttttgggtgaattcaagcaaatgctcttgaaagaggtactcagtcctgaa
ggcatcgatgcgagcagtgcgctgtcgaacgagaacttcgacggggacgcttgccagaga
atgctcgtttggacgtttgtggcgcgcatcaatcagaccattcggccaagtcgccttctc
aacgatggaaaccatgaggagccactcgagagggcatggaatgatcgagcaatcgcccgc
aacaatcaagctggggcaagtcccggtagcatgggtagctcgatccatgcggtgaacttg
ttcatcgacgtccgccaggaaccggtccgcttggcggccctgtttgacaaacgagagtgt
ctcatgctcttcaaatggtatgaatcggcagatccaccggctcgggaatctcccgagctt
cgcgtcctcggctgggatgttgtgccgatgcatctcacgatgcagaatctagtagcttta
ctcagagagcgcaatgtgttgccccgcgtaccgctgtcggaactctattggtatgaggaa
gtcacaagtcaggatgccaaggagatcgtctctgacgtggcgctctcgaccgcccgtaat
cagttgcaaagcggagatattatcatattcggaagacgatcacctattcggcagcaaact
gatcagacggctcgggcactgaacgtgaacgagtcgggcaacaattccgaagcaccggta
tccagtgctgcgctgctcgcaagtatcttgcaggatccggatctctcagttgaggaacaa
gcaaacgcgctctaccggcatatgttttgggatgcgcgggactttctccggcaccgttgc
gatgttcgactggttccgcttactcttcagagaatgagcggtgctgcaggagacgagcct
ctcaccgaggaaccttctcgcgggggatccgtcgcatcgggacccggctcagatcagcag
aatgcatcagagatcctattacgaaacgtatccacgcagttgacgcagtatgggttagga
actctgctggtcgcgaaactgcgcaatctgcatcagcagcagcagggtctagatttgatg
cagacttgcggagtcactgccgaggatctgcgacctagccgagttcgctttcatcgaaga
ggcttttcatcgctagatgactttctctatccgagagattccgatccgatccctatgagc
ggtgctcgaacgcggaaaatactcgaatgcatcgtatccaaacaacgaattgtgaaattg
ttctatgagttcatcgataccgatgcggaagccttcgagggcaagcaggaagtgacgata
acttggcgaccaacgccgatcgatatgattggacgaaaaattctgctcgccttgccgctg
aacgctacctacggggacctgattcgggaactggagtcgaaattgtccgtcacggagcgt
acggcgttgcagtcgcaatacgcaggcatacgagtgcacgaactgtggcagaagaaaata
attgctggtatcgtacccttggaccgcactgttacggttctgggtccggatagcaaccgc
gaaaactttgagattctggcggaaccggttccgcctcatgagacccctgaagagctctcc
cgccaaggctgtgtgctcattcgagttgcgcacatatcgaagagtgcgtcaccaccgttg
tacgggatccagcaagatgagaactacgccgctggcggtcttgcgacggtgaacagtttc
ggattgccgtttttgctgcgggtgccgtcgcctgagatccatggcactttgcctgttcaa
cagctccaaacgcttattcaagaacgtctccagctacctgaaaacgagttccgacaatgg
cgcctgctgtatgtacgtccagcggagcggcatcccgtgatctacctgcaacccaatggg
cacgaagagagcgagcgatccgctgcgctgggctctccagaaaacaccgaaaaagctcac
cacggtgaacaacctgtgaatcattcggagaccaccaagtcagggcgaccaagcactgaa
aagatatccgagttggctgtgtcgaacggtcgccagccgagcgttgcagagggcgtcacg
ggagccgcggttgacactgctaccatgctttcggcggaagagaaactgctgcgtcggggg
ctcatcaacctgcaggattgcattgtcgagaacgatgatacttatgtccacaattttatt
ggtctagagcatcatgattcgaacgctaccaagcggagagcgacatcgcgactgagatac
ctgaacgacaagcctttgaagattgcttaa |
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