Cyanidioschyzon merolae: CYME_CMR410C
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Entry
CYME_CMR410C CDS
T00175
Name
(RefSeq) similar to translational repressor pumilio
KO
K17943
pumilio RNA-binding family
Organism
cme
Cyanidioschyzon merolae
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PUF
PUF_NOP9
Motif
Other DBs
NCBI-GeneID:
16997095
NCBI-ProteinID:
XP_005538631
UniProt:
M1V6X3
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All DBs
Position
18:complement(1000808..1005328)
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AA seq
1506 aa
AA seq
DB search
MGTQRNWTGVDARARAAPAQDDAARVRVGTVSGSAVSPQMTLPVGFEAALENEQPPRVAS
APPPGQFRKKVEFGRGASLLGVATGEDIWSAASERIGGSGEDAGKNSMYASTIWGCPGFC
SVPSPGRVSGSNDAQYSDPGELSTPNQMSSDRLASWKVASGSHQLGADTRRNEMLRGYGS
QTDPLRGPRVLQRDWTEKDQTTLERFSNLSIQSAPPLRRAPTQWTFQSRPEQADWWRAQQ
SALSAGSESGSAAFQSDLRTATPQGWGVAPCPRVWQPAACCSSPSEQQPLAGPLTCTGRT
TPSAAEGAYSRLWAPIPHRTISEIARSDVARTPSPAFESSSVVSSPVRARSASQYSSVSG
LEGGSVVSGRAFGSSRSAWSGPVSGAASWKSCEDAWDQQRATTALSGINTLNGYARSPRA
PVSASSVSSSSSSLPMANNPSIVASDPSLMRWAGGCGASPLYNASAAYQSAQSGTVCTRS
WSSPATVQAPNSGYPAVLNHQPRAPKERSADDRQICTGKKGDGLDTNGNEEHEQRVPNRR
ERAASSPGYVGHVTNGKSQNSEESSCGRRDAAARLESTLQWASRPPLNIPVTESQPSPET
CVQEQRTARCCLESPADGVSEPDNQCRVDSQMIGSGTTSVSETGRPQIDPNANRTHRLSP
SRQSSLVEGTFEHYECHNGRRLCPGYSATSPRPLQVANAAGAHLSQALPLISPSPGATQP
LEESIWIHPDQIVLNGSEQAGLCTEVELADRRATPVYSWHPAAQLPSGIACPQGRAASVR
KESTLVASGSEDANESSMFSLVPDHCVSFPPVIPSGCRFVCAHATEDAMRMRSAKHGNLA
DASIPESCLSAEPAAYGAQTTSPRPSSASSSSFVSEENGGRPAVPGSVGPAGANPIPAAA
AAARAPRREPTTQMGHSSGVAQLRAPFVSVAPILTDSYSGQVRVGGFLQTAAAPPATVPP
TGAPPRSPLHFPSLDLGTSGTLSSPDAANPPNSGVIASVGRSALLERFRTALLASDEAFT
SWKLEDIRGQIVEFSTDQHGSRFIQTKLETATPDQVGWVLQEVLAEMNRLVTDVFGNYVV
QKLLEHGTARDLQAIAMKLKNRILALSLHMYGCRAVQKALEVLPASTQAELVIELDGHVL
KCIRDQNGNHVIQKCIERVPGQHVQFIVDAVRGQAVSLAEHSYGCRVIQRILEYSPEEQK
VPIMREIMQACRTLIRDQYGNYVIQHVVEHGKEEERAHILRMVRDQCISMSQHKYASNVV
ERCLQHGSPADRKALIDILLGRSDVAGSGSGGGGSSGATALPRNSVPLIDLVQDQFGNYV
VQRVLDVAGDEQRQQAAELLRANLNVIKRFSYGKHILARLESTGAAAMAPTFANREGAPG
GAHPCVQNLQNTGKRAPAQRLQLEPSSNCSSASNSSSSSATTTSSASSTWNLRTASIASP
SKRRGRATGCFSSEVLELEASMKKRSEGVTAGGFPQASPASATATAATAERNPRAAGRAR
RQTHTR
NT seq
4521 nt
NT seq
+upstream
nt +downstream
nt
atgggcacgcaacgcaattggaccggcgtcgatgctcgagccagggcggcgcccgcgcaa
gacgacgcggctcgtgtgcgcgttggtacggttagcggaagtgctgtgtcgcctcagatg
acacttccggtcggttttgaagcggcgttggaaaacgaacagccgccccgagtggccagc
gcgccgcctccgggtcagttccggaagaaggtggagtttggacgcggtgcatcgcttttg
ggagtggcaacaggcgaagatatttggagtgcagcatccgagcgcatcggtggatccggg
gaagatgcgggcaagaactctatgtatgcttcgacgatttggggatgtccgggtttttgt
tcagtaccgtcaccgggacgtgtttccggctccaacgacgcgcagtattctgatcctgga
gagctgtccacgccgaatcagatgtcttcggatcgccttgcgagttggaaagttgcttct
ggctcccatcagctgggagccgacacccggcgcaacgagatgctccgtggctacgggtcg
cagacggatccattacgtggaccccgtgtcctacaaagggactggacagaaaaggaccag
acaacactggagaggttttcaaatttatctattcagagcgccccgccattgaggcgtgca
ccgacccagtggacgtttcaaagccgtccagagcaggcggactggtggcgtgcacagcag
tcagctctttccgcaggctctgagagcggatcagccgctttccaaagcgatttacgcact
gcaactcctcaaggctggggagtggcgccctgcccgcgggtatggcagcctgcggcgtgt
tgttcctcgccgagtgaacagcagcccctggctggtccactgacgtgtactggaaggacc
acaccgtcggctgcggagggcgcctactcaaggctctgggcaccgattccgcaccgcacg
atttcagagatagcacggtcggatgtggcgcgcacgccaagcccagccttcgagtcctcc
tcggtagtgtcgtcaccggtgcgagctcgaagtgcgagtcagtacagttccgtgtctggg
ctagaagggggatctgtcgtgagcggtcgcgcgtttggaagctcccgttctgcgtggtcg
ggacctgtgtccggggccgcttcgtggaagtcatgcgaagacgcctgggatcagcagcgt
gcaacgacggcattgtcaggcatcaacacgttgaatggctatgctcgttcgcctcgagca
ccggtttccgcgtcatcggtctcctcgagttcgtcgtcgttaccaatggctaataaccca
tcaatcgtggcttccgatccgagcctgatgcgctgggcaggaggctgtggcgcatcaccg
ctgtacaatgcatcagcggcataccagagcgctcagagcggtactgtgtgcaccagatcc
tggagtagtcctgccacggtgcaggcgccgaacagcgggtatcccgctgtgctcaatcat
cagccccgagcaccgaaagaacgctccgccgatgaccgtcaaatatgcactgggaaaaag
ggggacggtttggataccaacggtaacgaagaacatgaacagcgggtcccgaaccgtcga
gaacgcgcagcgagctcccctggttacgtgggtcatgtcaccaatggaaagagccagaac
agtgaggaatcctcgtgtggtcgtcgagatgcggctgcacgtctcgaatccacactgcaa
tgggcaagccgccctccgttgaatatcccagtcacggaatcacaaccgagcccggaaacc
tgtgtccaggagcagcgaacagcccgctgttgcttggagagccccgctgacggtgtttca
gagcctgacaaccagtgtcgggtggactcccaaatgattggcagtggaacaacttccgta
tctgagactgggcggcctcagatcgatcccaacgccaataggacccatagactttcaccg
agcaggcagagttcgctcgtcgaaggcactttcgagcactacgaatgccacaacggtcga
cgtctgtgtccaggctattcagctacgagccctaggcctctgcaagttgcgaacgcggcc
ggcgcgcatctctcgcaggcgcttccgctcatatcgccatcaccaggtgcgacgcaaccg
ctcgaagaaagcatctggattcatccagatcagatcgttttgaacggcagcgaacaagcg
ggcttgtgcactgaggtggagcttgcggatcgacgagcaacacccgtgtattcctggcac
cctgctgcacagctgccgtcgggaatcgcttgtccacagggtcgtgctgcatctgttcgg
aaagagagcactttggttgcctctggcagcgaggatgctaacgagtcgtcaatgttttcc
ttggttccggaccattgcgtatcgtttcccccggtcattccgagcggatgccgcttcgtt
tgtgcacatgccacagaagatgccatgcgaatgcggagcgcaaaacatgggaacttggct
gatgcttcgattccggaatcttgtctttcagcagaacccgcagcctatggagcgcaaacg
acatcaccgaggccgtcgtcggcgtcttcttcttcttttgtatccgaagaaaatggtggc
aggcccgccgtgccagggagtgttggccccgctggtgcaaatccgataccggcagcagca
gcagcagcaagagctcctcgacgagaaccaacaacccagatggggcattctagtggtgtg
gctcaactgcgcgccccgttcgtgagcgtcgcaccgatactcacagactcgtacagcggg
caagtgcgtgtcggcggctttctgcagactgccgctgctccaccggcaacggttccaccg
acaggggcccccccgaggtcaccgctacactttccgtcactggatttgggtactagtggc
accctctcgagtccagatgccgctaatccgccaaatagcggagtcatagcgtccgttggg
cgctcggctctcctggagcgcttccggacagccttgcttgcgtcggacgaggcgttcact
tcctggaaactggaggatattcgtggtcaaatcgtggagttcagcacggatcagcatggc
tcgcgcttcattcagaccaagttggagactgcaactcctgatcaggttgggtgggtgctg
caggaagtgctcgcagaaatgaatcgcctggtgacggatgtctttggcaactacgtcgtg
caaaaactcttggagcacggcacagcacgtgacctacaggcaatcgcgatgaaattgaaa
aaccggatcctagcgctctcactccacatgtatggttgcagggctgtacagaaggcactc
gaagtcttgcctgctagtacgcaggcggaactcgtgatcgaactcgacggacacgtgttg
aagtgtatccgtgatcagaatggcaatcatgtgatccagaaatgcatcgaacgagttcca
ggacaacacgttcagtttatcgtggacgcggttcggggccaggccgtctcgcttgctgaa
cattcctatggatgccgggttatacagcgcattttagaatattcaccagaggagcaaaaa
gtcccgatcatgcgcgagattatgcaggcgtgccgaaccctcattcgggaccaatacggt
aactatgtcatccagcacgttgtcgagcatggaaaggaggaagagcgtgcgcatattctc
cgcatggtcagggatcagtgtattagcatgagtcaacacaagtacgcgagtaacgttgtc
gagcgatgtctgcaacatggctccccagcggatcgcaaagccctcatcgatattctcctg
ggccgatctgatgttgctggcagtggcagcggtggtggtggtagttctggcgcaactgcg
ttaccccgcaacagcgtgcctctgatagatcttgtccaggaccaattcggaaattatgtc
gtgcagcgagtcctggatgtagccggcgacgaacaacgtcagcaagcggcggagcttctt
cgtgcgaatctgaacgtcatcaaacgcttctcctatggaaagcacattcttgcgcgtctg
gagagcactggagcagctgccatggcaccaaccttcgccaaccgcgaaggtgcgcccgga
ggcgcgcacccttgcgtgcaaaacctccagaacactggaaaacgagccccggctcaacgt
ctgcaactcgagccatcaagcaattgcagctccgcaagcaacagttccagcagcagcgca
acaacgacatcgagtgcgagcagcacatggaatctccgcactgcctcgatcgcatcgcct
tcaaaacgtcgaggtcgcgcaactggttgctttagctccgaggtcttggaattagaagcg
tcaatgaagaaacgctccgaaggcgtcaccgcaggaggattccctcaagcctcaccagca
tccgcaacagcaacagcagcgacagcggagcggaacccacgtgctgcggggcgggcacgt
cgacaaacgcacacgcgctga
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integrated database retrieval system
