Cyanidioschyzon merolae: CYME_CMS034C
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Entry
CYME_CMS034C CDS
T00175
Name
(RefSeq) probable structure specific recognition protein, recombination signal sequence recognition protein, chromatin-specific transcription elongation factor
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
cme
Cyanidioschyzon merolae
Brite
KEGG Orthology (KO) [BR:
cme00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cme03000
]
CYME_CMS034C
03036 Chromosome and associated proteins [BR:
cme03036
]
CYME_CMS034C
Transcription factors [BR:
cme03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
CYME_CMS034C
Chromosome and associated proteins [BR:
cme03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
CYME_CMS034C
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
PH1_SSRP1-like
SSrecog
Rttp106-like_middle
POB3_N
Motif
Other DBs
NCBI-GeneID:
16997370
NCBI-ProteinID:
XP_005538719
UniProt:
M1VLQ6
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Position
19:83363..85114
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AA seq
583 aa
AA seq
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MSAAQVIDPVYVTDQSLGPGSLRLSKAGLLWSPRNEGLYTISVAREDLASLRWFRGARGD
QLRCTRKDGSTVNFEGFRPADRATLEEYVKEAWAWTKGVPRGEQGVVGWNFGQVRIEGES
VLFVSGSETAFELPISDISQVVRSGRNELALEFHLDDTAGKTDECLVEMRFQAPTEEDAI
ALHAELSARVGSASFMGESLVFFEELPFIVPRGRYDLELFPTYLSMHGKSFDYKILYKTV
RRMFLLPKPDEIHLALVISLDPPIRQGNTTYPHLVLQLRRDDDEIEVALNMKPEELQKRY
GDKLPPKISGELWQVVTKVLRVLVDKPLHAPKNFVTSQGAHALRTALGANDGYLYPLENC
FFFVNKPPTYLRYEDVDFVEFKRLEMDRRFDLQVVMLNGSTLLFTNLERSEFSTLYQFLE
SKQVRMVGIPPALLRGATTGKTSMRAAAVRAEMAIAAEEAARREADGEDDEEADDQDTKY
DGKRDPQTFDDEDDEEDEDFAGDVEDESDGAPSDSDAARDDDDDDDDDDDDDDDEALEAE
LEPEEPLEQVTEEDQSQGDPESTSAAAAAETGHATDLEKALHS
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atgagtgctgcccaggtcattgatcccgtttatgtgaccgaccagtcgcttggacctggg
tcactgcggctgtcgaaggctggactactctggtcaccgcgcaacgaaggtctatacacg
atcagtgtggctcgcgaggacctcgcgtcgctgcgctggttcagaggcgctcgcggtgac
cagctacgctgcactcgtaaagacggcagcaccgtgaactttgaaggttttcgtccagcg
gatcgcgcaaccttggaggagtatgtgaaggaggcctgggcatggaccaagggtgtaccg
cgcggcgaacagggcgtcgtcggatggaactttggacaggtgcgcatcgagggtgagagc
gtgctcttcgtctctggatcagagacggcgttcgagttgccaatttcggatatatcgcaa
gtggtgcgttcaggtcgcaacgagctggcgttggagtttcatctcgacgacacggcaggg
aaaaccgacgagtgccttgttgagatgcgcttccaggcaccgaccgaggaggacgcaatc
gcgctccacgcagagctatcggcgcgtgttggctcagcgtcgtttatgggtgagtctcta
gttttcttcgaggaactcccgtttatcgtgccgcgaggtcgctacgatctcgagctgttc
cccacgtacctgagtatgcacggcaaatctttcgactacaagatcctgtacaagacagtg
cggcgtatgttcctgctgccaaaaccggatgagatccatctggcgctggttatctctctg
gacccgccgattcgccagggcaacacaacctatccacacctggtgctccagctccgccgc
gacgacgatgagatcgaggtggcgttaaacatgaagccagaagagttgcagaaacgctac
ggggataagttgccgccgaaaatcagcggtgagctctggcaagtcgtcacgaaggtgctg
cgtgttttggtcgacaagcccctgcatgcaccgaagaattttgtgacctcacagggtgcc
catgcgctgcgcaccgcgctcggtgccaatgacggttatctgtatccgctggagaactgt
ttcttctttgtgaacaagccgccgacctatttgcgttatgaggatgttgattttgttgaa
ttcaaacgactggaaatggatagaaggtttgacctgcaggtcgtgatgctgaatggctcc
acgctgctctttacgaatctcgagcgaagcgagttctcgacactctaccagtttctggag
agcaaacaagttcggatggtcgggatcccgccggcgctcctgcgcggtgcaacgaccggc
aagaccagtatgcgcgcggcagccgtgcgagccgaaatggctatcgccgcagaggaggct
gctcgtcgtgaagcggatggtgaggacgacgaagaagccgacgaccaggataccaaatat
gatgggaaacgtgatccgcagacgtttgacgacgaggatgacgaggaagatgaagatttt
gcaggcgacgttgaagatgagtccgacggtgcacccagtgactcggatgcagcgcgcgac
gatgacgatgatgatgacgatgatgatgatgatgatgatgatgaggcgctagaagccgaa
ctcgagcccgaggagcccctcgagcaagtcacggaggaagatcagtcgcaaggcgatccg
gaatcgacatcagcagcagcagcagcagagactgggcatgcaactgacctggaaaaagct
ttacattcctga
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