Cyanidioschyzon merolae: CYME_CMS119C
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Entry
CYME_CMS119C CDS
T00175
Name
(RefSeq) similar to Stat3-interacting protein
KO
K11374
elongator complex protein 2
Organism
cme
Cyanidioschyzon merolae
Brite
KEGG Orthology (KO) [BR:
cme00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cme03016
]
CYME_CMS119C
Transfer RNA biogenesis [BR:
cme03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
CYME_CMS119C
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Beta-prop_WDR5
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_CAF1B_HIR1
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
EIF3I
Beta-prop_WDR36-Utp21_1st
Beta-prop_EML
Beta-prop_WDR41
Beta-prop_WDR36-Utp21_2nd
WD40_RFWD3
Beta-prop_Vps41
Beta-prop_WDR75_2nd
Motif
Other DBs
NCBI-GeneID:
16997567
NCBI-ProteinID:
XP_005538787
UniProt:
M1UWS8
LinkDB
All DBs
Position
19:301363..303900
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AA seq
845 aa
AA seq
DB search
MGDLSLGFEKSCVEIEQKLVGCRRAGYHALDCIRLKCSSEGAAVTQSLLAFSNDRAVYVT
NLTGIRYSLVSHEGIVNCLRWQRLGGQGNLYGTGVLVSGDAAGALCVWRPQGLIHRFDLA
KLFSTTDSATDHSLFSIVCLAVPPGAGEVATVGTSGPLFSCTSGGYLYAFEYANTASAVQ
LTALPESVDCLPLGSGAIRSEQSFDGCYLVFVGNTIGTIEGFLYNSKHQTFARTTTIEGH
ADCIRDVALHVMDIRNQCADQLQNRRNATGHVLLASASQDGTARLWLVASSTHQGHLDLI
DDPECLTVLYDHQSAVTTVKFIRGSCCADERPRLLTAAFDRTVKLWELSGDSAPRIQRVA
EMGVIGEQSSFHGFYSAAYGEWDDGQSVVFATTYTGAVFQWRNASSQNLWRNDEPCIRGH
NLGVTDLDWCPPDGLMLVTVSRDMTCRLFAKAQVTTAYQWVELARPQVHGHEIFAVRFVG
KSGLKLASAAEEKAVRLFDAPQQFVEELSGILQTTRPEACSDGKPRPVRASRIALSLTNQ
PEYEASESNEGEEIHRDLSPSAGRLGRFPASGASPRTEATLQQDTLWPECEQLFAHPNNV
QRLDSIEQQDGSFILASACVAQSMRESAIQLWEIQDAAVELHDLRCHDLTVTDLRFAYRI
VGKTRRNLLLSVARDRSWIVWNVHSREVISRRKNAHARMILTCAWVDPQQGLFATGGRDK
CIHLWQVSNFDAPEAESLAEPLQSWRLHSAVTAMDVFSDRPDRAIVLAGLESGALHGFSV
STVAPYCSKALQMSENVRHVRAVSRIRFRPRSRGVFASCSEDGSVMIARILTTEKNEVAD
TVSTF
NT seq
2538 nt
NT seq
+upstream
nt +downstream
nt
atgggggacctttcgctgggatttgagaagtcctgcgttgaaatcgaacaaaagctggtc
ggttgccgccgagctgggtaccacgctctagactgtattcggttgaagtgcagttccgaa
ggtgctgctgtcacacaatcgttgcttgctttcagcaacgatcgagcagtttacgtcacg
aacctgacaggaattaggtactcactcgttagccacgaaggcatcgtaaactgtctgcgt
tggcagcgactcggaggtcagggcaacctttacggcacgggagtactcgtgagtggcgac
gcagccggcgctctgtgcgtttggcgcccgcagggcttgattcatcgtttcgacctggcg
aagctattctcaacgacagattctgcgacggatcactcactcttttcgattgtttgttta
gcagttccgcctggtgccggcgaagtggcaactgttggtacgagcgggccgctcttcagt
tgtacttctggtggctatctttatgcatttgagtatgcgaacacggcatcggcagtacaa
cttacagccttgcctgagagtgtagactgcttgcctttgggttctggagcgatacgatcg
gagcaatcttttgatggatgctatctcgtgtttgttggcaataccataggtaccattgaa
ggttttttgtataacagcaagcaccaaacattcgcaagaacaacaacaatcgaaggacat
gcagactgtattcgagacgtggcgctgcacgtgatggacatccgaaatcaatgcgccgat
caactgcaaaatcgacggaatgctactgggcacgtcttactcgcgtctgcgagtcaagac
ggcacagctcgcttgtggctcgtcgcgtcgagcacgcatcagggacatttggatttaata
gatgacccggagtgccttacggtgctctatgatcatcagtcagctgttaccactgtgaaa
tttatccggggctcgtgttgtgcagacgagaggcctcgtttgttgacggcagcctttgac
cgcaccgtgaagctctgggagctgagtggggattcagcgccaaggattcagcgtgttgca
gagatgggtgttatcggtgagcaaagctccttccatgggttctacagcgccgcctacggg
gaatgggatgacggtcaaagcgttgttttcgcaacaacctacactggtgccgtcttccag
tggcggaatgcatcatctcagaatctgtggcgtaacgatgagccgtgcattagggggcac
aacctgggcgttactgatttggactggtgcccccctgatggcttgatgctcgtcaccgtt
tcgcgggatatgacgtgcagactctttgctaaggcgcaggtcaccactgcgtatcagtgg
gtggaattagcacgccctcaggtgcacggtcacgaaattttcgctgttcgctttgtcgga
aaaagtgggctgaaactagcatctgctgcagaagaaaaagcggtgcgtttgtttgatgct
ccccagcagtttgtcgaggaattatctggtatattgcaaacaacgaggccggaggcctgt
tctgacggaaagccgcgtcccgttcgagcgtcccgcatcgcgctttcccttacgaaccaa
cctgagtatgaagcatcagaatcaaacgagggtgaggagattcatagggacctgagcccc
agcgccggacgactcggaaggttccctgcatcgggcgcttcgcctcgaacggaggcgaca
cttcagcaagacactctatggccagagtgcgagcaactatttgctcatccaaacaatgtt
cagcggttggattccatcgagcaacaggacggctctttcatcctagcctctgcctgtgtc
gcacaatctatgcgggaatccgctattcagctgtgggagattcaagatgcggctgttgaa
ctccatgatcttcgttgccatgatctgaccgtgacggaccttcgtttcgcgtataggatc
gtaggaaaaacccgacggaacctcctgctgtccgtggcgagggatcgctcgtggattgtg
tggaatgtgcattcccgagaggttatctcgcggagaaagaatgcacatgcgcgaatgatc
ctcacatgcgcttgggtggatccccaacaagggcttttcgccactggtggacgggacaag
tgcattcacttgtggcaagtttcgaatttcgatgctccagaagcagaatccttggcagag
cctcttcagtcgtggcgtctgcacagtgccgtcacggcgatggatgtgttcagtgacagg
ccggatcgcgccatcgtcctcgctggccttgagtccggagctcttcacggtttcagcgtg
agcacggtggcgccttactgctcgaaagcgctccagatgtctgaaaacgtccgacacgtt
cgagcggtaagtcgaattcgttttcgaccccgatcgagaggtgtgtttgcgtcctgcagt
gaagatggtagcgtgatgatagcgcgtatactcactacggaaaagaacgaggttgctgac
accgtttctactttctaa
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