KEGG   Cyanidioschyzon merolae: CYME_CMS459C
Entry
CYME_CMS459C      CDS       T00175                                 
Name
(RefSeq) similar to RNA export mediator
  KO
K18723  nucleoporin GLE1
Organism
cme  Cyanidioschyzon merolae
Pathway
cme03013  Nucleocytoplasmic transport
cme03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:cme00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    CYME_CMS459C
   03015 mRNA surveillance pathway
    CYME_CMS459C
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cme03019]
    CYME_CMS459C
Messenger RNA biogenesis [BR:cme03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     CYME_CMS459C
SSDB
Motif
Pfam: GLE1
Other DBs
NCBI-GeneID: 16997529
NCBI-ProteinID: XP_005539046
UniProt: M1V7E2
LinkDB
Position
19:1147448..1149796
AA seq 782 aa
MVVRSRTEQLRRMAAAQWEASWGAAASLQDHRTEGLVEYLESTRNAGTGKTPPRSGASAA
PDAPQFASNEKRAPQQEPLRPLNEALVRLTPTTDFFENVQSTGVVSVSTALESGGDRWTT
GQRLAPKTFASGSAPGSADQAAKPEIVLIQAQQKSLTPSISKRTRENGSGRSRVHAKPVP
ESSFGDVEARTCAFIEQWLWVALTANKTSIGTSQSQVDGLIMDGWWRWNTPSNACPWTKE
CVSLARVLEKLECERLAASEQALDRLQQRLCEVRAVSTTAGAAAAAATLGSAGHVTKSPS
GVRGASVPGETFPSLDAIHSPCGDPQAPAITKTTTATTMKLTGSASAHSGATESASSRYA
QGAKLPSSLPVSGSVSSPDASALTLEREPHTNAHTRAYSKPETKPIQTSRAGVTSKDASP
SPSPSPRPHTSLLTPTPASTLAPDTRRDASVDASTRATSAIDGTAASDAPTTQVSRASPE
TALPADVQQVLDHYTQICNLADKFQQDPASQSLRFQLRKRINLAVNQIGLSLPSVLHKSS
VLAALLHESLTTETAVESSESVSLLDAWLQLQVVRRIVREGAEQVVVSLPSSFALGAVLV
LLTQQHPRLKPVVLGTFYQLCPYTIPHWYRRRPGESLEAYLVRLGYSKPNESFESYYERM
GGYLSLFAAMLQTALPNMHPNPYGTGMLWTWSARVVNAKPRRMTCLLLGNVFEVAGYALS
QQYGNQFRKLLRLVEAEVLPRLPKDAPPGPTARLKHWIEEALRSGPQPCPGHILPMRDSQ
NT
NT seq 2349 nt   +upstreamnt  +downstreamnt
atggtcgttcgtagccgaacggaacaacttcgtcggatggcggctgcacaatgggaggct
tcctggggcgcagcggcttccctgcaagaccatcgtacagagggcctggtcgagtatctt
gagagcacccgcaacgcaggcacaggaaagacacctccgcggagcggcgcaagtgctgcg
ccagacgcaccccagtttgcgagcaacgagaagcgagcgcctcagcaagagcccctacga
ccattgaacgaggcgctggtgcgtttaacgcctacgacagacttttttgagaacgtgcaa
agtacgggcgtggtgtcggtttcgacagctctggaaagtggcggcgacaggtggacaaca
ggtcaacgtttagctccgaaaacgttcgcgtcgggaagcgctccaggttctgcagaccaa
gcagcaaagccagaaatcgtactcattcaggctcaacaaaagagcttgacaccttcgata
tcgaaaaggacgagagagaatggctcagggcgatccagagtacatgcgaagccagtaccc
gagtcctcgtttggcgatgttgaggcacgaacctgtgcgtttatagagcaatggctctgg
gtggcacttactgctaacaagaccagcattggaacgtcccagagtcaggtagatggcctc
atcatggacgggtggtggaggtggaacacgcccagcaacgcatgcccatggacaaaggag
tgcgtctcacttgcccgcgttctcgagaaactcgaatgtgagcgacttgctgcatcggag
caagccctggatcgtctccaacagcgactatgtgaagtgcgggccgtttcaaccacagca
ggagcagcagcggcagcagctactttaggttccgcgggacatgtcacaaagtcgccctct
ggagtgcgaggcgcctctgtaccaggggaaacctttccctcgctggatgcaatacattct
ccatgtggcgatccgcaagcaccagcaataacaaaaacaacaacagcaacaacgatgaaa
cttactgggagcgctagcgcacattctggtgccactgaaagcgcctcatctaggtatgca
caaggcgcaaaacttccatcttctctcccggtaagtggtagcgtttcgagtccggatgcg
tcagccttgacactcgaacgggagccgcacaccaatgcccacacccgggcatactccaaa
ccggaaacgaaaccgattcagactagtcgagctggagtcacgtcgaaggacgcgtcaccg
tcaccgtcaccgtcaccaagaccacatacatcgctgctgacaccgactcctgcaagcaca
ctcgcaccagacacgagaagagatgcatccgtggacgcttcaacccgtgcaacatcggct
atcgacggcactgcagcgagcgacgcgccgacgacgcaggtatcccgtgcctctccggaa
acagcgcttcccgcagatgtgcaacaggtgttggatcactatacgcaaatctgcaacctg
gcggacaagttccagcaagatccagcgtcacagtctctgcgtttccagttgcgaaaacgc
attaacttggcagtcaaccagattgggctatcgttaccctcggtcctgcacaagtccagt
gtcctcgcggcgctgctgcacgagtcactcacgactgagactgcggtcgagtcatcagaa
tccgtctccttgctggacgcttggttacagttgcaggttgttcgacgaatcgttcgtgaa
ggcgcggagcaggtggttgtctccctgccgtccagttttgccctgggtgcggtgctcgtg
ctcttgacccagcaacatccacgtctgaaaccagtggtgctgggcaccttttatcaattg
tgtccgtacacgatcccgcactggtatcgacgtcgacctggagagtcgctggaagcgtac
ctggttcggctgggctacagcaaacctaacgagtccttcgagagctactacgagcgcatg
ggcggatacctctcgctctttgcagctatgctacagaccgctttaccgaatatgcacccg
aacccgtacggcactggcatgctttggacttggagcgcccgcgttgtgaacgctaaaccg
cggcgcatgacatgcctgcttctaggcaacgtgttcgaagtcgctggatatgcgctgagc
caacagtacggcaaccagttccggaaactgctacgtcttgtggaggcagaagtgctccca
cgactgcccaaagacgcaccaccgggtccgacagctcgcctgaaacactggatagaggag
gcgctgcgcagtggaccgcagccatgtccagggcatatcctgcctatgcgggactcgcaa
aacacctaa

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