Cyanidioschyzon merolae: CYME_CMT131C
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Entry
CYME_CMT131C CDS
T00175
Name
(RefSeq) probable RNA helicase with DEAD box
KO
K14776
ATP-dependent RNA helicase DDX10/DBP4 [EC:
5.6.2.7
]
Organism
cme
Cyanidioschyzon merolae
Brite
KEGG Orthology (KO) [BR:
cme00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cme03009
]
CYME_CMT131C
Enzymes [BR:
cme01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CYME_CMT131C
Ribosome biogenesis [BR:
cme03009
]
Eukaryotic type
90S particles
Helicases
CYME_CMT131C
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
Cas3-like_C_2
Helicase_C_2
Motif
Other DBs
NCBI-GeneID:
16997934
NCBI-ProteinID:
XP_005539176
UniProt:
M1V7I7
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All DBs
Position
20:complement(355438..357480)
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AA seq
680 aa
AA seq
DB search
MGLKQKQSAPPKISKRKSRRLDAIAELAELQQRRAQLREVLGENSAASPTDRLRFLSSSR
DFSELPLSRRTLQGLKVSGYTKMTPIQRAAIPYALAGRDLLGAARTGSGKTLAFLVPLLE
RLYLDGFQSQLDGLGAVILTPTRELAYQIFAVLQNVGRFHTFSAGLLIGGSRSTDEERDR
LPYMNILIATPGRLLQHLDETPYFTTDRLRFLALDEADRILDLGFAKTIDAIIQQLKSSR
RNPATPEEGRQTVLFSATQTRSVRGLARLSLHDPEYIALRDQEQVDGYDMPKRLEQLYVV
LDGAFMKLSLLYSFLRSHLKQKILVFLTSCKQVRACYQILCRMRPGLPVLYMNGQMKLSS
RLQMYERFAEAPAACMLATDVAARGLDFVDLDWVLQVDAPEDVASYVHRVGRTARYQRDG
RALLFLTRGKEETLVQKIYKRTGVSLQRVRIRANSYIDVQKKVSAIVAADAHLKYIVQRG
LETYLRHIAIQADKDVFDVTEIDAEALALSWGLAAAPSQLLLAVTDSKQSDERLARDVYG
YRQERLETRAATSAAEATSRSELAEAGAPATSSAAMDAAVESEEEIFFSVRGENAHLCEQ
RDEDNEAQNARRHQSSLAPNHDKENVQESFRPGWLQEEHAAYAARLLEERLAVDAEDRRR
DRERLREKRKRRQRELSPEP
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atgggtctgaaacagaagcaaagtgcgccgccaaaaatatcgaagcgaaagtctcgcaga
ctagatgcgattgcagaactggcggagcttcagcagagacgagcgcagctccgagaggta
ctcggtgagaactccgcagcgagtccaacagatcggctgcgatttctgtcgagttcccga
gactttagcgagcttccactctccagaagaacccttcaaggtctaaaagtaagcggttac
acaaaaatgactcccattcaacgggcagcgatcccgtatgctctggcgggtcgggacttg
ctcggcgccgctagaacaggttctgggaagacgctcgcttttttggtaccgcttcttgaa
agactttacttggacggctttcagagtcaactagacggtcttggtgccgttatcctcacg
cccactcgggagctagcatatcagattttcgcagtcctgcagaatgttggcagatttcac
acattttctgctggtctgctgatcggcgggagtcgcagcactgacgaagagcgtgaccgc
ctcccgtatatgaacatccttatcgcaacaccggggcgtcttctgcagcacctcgacgag
acgccctacttcaccacggaccgattgcgcttccttgccctcgacgaggcagaccggatc
ctcgacctcggctttgcaaagactatcgatgctattatacagcagctcaaatcctcgagg
cgcaaccctgctacacctgaagaaggccgccagacggtgctcttctccgctacccagact
cggtctgttcggggcttggcgcgactttcgttgcacgaccccgagtacattgcgcttcgt
gatcaggagcaagtagatggttacgatatgccaaagcgtctcgaacaactctatgtggtg
cttgatggtgctttcatgaagctgagcttgttgtattccttcctccgttcgcatctgaag
cagaaaattttggtgtttctcacgtcctgcaaacaggtgcgagcctgttaccaaattctg
tgtcgcatgcggcccgggctacccgtactctacatgaatggtcaaatgaagctctcaagt
cgtttgcagatgtatgaacgatttgccgaagcaccagctgcctgcatgctcgcaacggat
gtggctgcacgcggcctcgactttgtcgacctcgactgggtgctccaagtggatgctccg
gaggatgtcgccagctacgtgcatcgggtgggtcgcactgctcggtaccaacgcgacgga
cgcgcacttctgtttctgactcgtggcaaagaggagacattggttcagaaaatctacaag
cgtactggagtgagtttgcaacgcgttcggatccgagcaaattcttacatcgacgtccag
aaaaaggtgtctgcgatcgtcgctgccgatgcccatctcaagtatatcgtgcagcgcggc
ctggaaacctatctccgacacattgccatccaggctgacaaggatgttttcgacgtcacg
gaaatagatgccgaggcgcttgcgctgagctggggtcttgcagctgcaccatcgcagttg
cttttggcagtgacagattctaagcagtcggacgagcgcctcgctcgtgacgtgtatgga
tatcgacaagaacgacttgaaacacgagcagcgactagtgccgcggaggccacttcgaga
tccgaattggcggaagcaggagcaccggcgacgtcttctgcagctatggatgccgcggtt
gaatccgaagaagaaatattcttcagcgtacgtggagaaaacgcacatctctgcgagcag
cgagatgaggataatgaggcgcagaacgcacgtcgtcaccaatcatcattagctcctaac
catgacaaggagaatgtgcaagaatcattccggccggggtggttgcaagaagaacacgca
gcgtatgccgcgcgcttactggaagagcggcttgcggtggatgctgaagaccgccgtcgt
gatcgcgaacgactccgggagaaacggaaacgtcgccaacgggagctcagccccgagccc
tga
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