Cyanidioschyzon merolae: CYME_CMT275C
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Entry
CYME_CMT275C CDS
T00175
Name
(RefSeq) valine--tRNA ligase
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
cme
Cyanidioschyzon merolae
Pathway
cme00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
cme00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
CYME_CMT275C
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
cme01007
]
CYME_CMT275C
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cme03016
]
CYME_CMT275C
Enzymes [BR:
cme01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
CYME_CMT275C
Amino acid related enzymes [BR:
cme01007
]
Aminoacyl-tRNA synthetase
Class I (U)
CYME_CMT275C
Transfer RNA biogenesis [BR:
cme03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
CYME_CMT275C
Prokaryotic type
CYME_CMT275C
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
Val_tRNA-synt_C
tRNA-synt_1_2
tRNA-synt_1e
DUF6635
Motif
Other DBs
NCBI-GeneID:
16997767
NCBI-ProteinID:
XP_005539285
UniProt:
M1VCK4
LinkDB
All DBs
Position
20:join(685217..686877,687046..688405)
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AA seq
1006 aa
AA seq
DB search
MQQPVRAVAFVQGGALLQRRWISDSTCRRLLGDASQRKRFAKELYSVPGVSLKSRALRLC
STTDASGKSVQTPFRTGSRPVFAENAEDAMPKNFDPAAHEERIYSWWEAAGFFSPRDEGV
GDIEKPFVIVMPPPNVTGGLHMGHAIGTTIEDILIRFHRMRGRPTLWLPGTDHAGIATQL
LVERALTASGKSRSEIGREAFVEMVWKWKQEKGGYITKQLRRLGASADWNREKFTLSPEM
SAAVAEAFVRLYDAGLIYRGTYMVNWSPALQTAVSDLEVEFSEEKGKLYLFKYMLAEPGS
EEDAFLPVATTRPETILGDTALCVHPSDGRFQKYIGMHAIVPFVHRRIPIVADARVDPSF
GTGVLKITPGHDRMDYEIGKTHNLPVITVIGKDGRIVPYSETDARFVGLDRFLCRERIWA
DLQSTGQAIEVREHTTRVPRSQRGGEIIEPLVSTQWFVRTRPLAEKALAAVREGQIRILP
ERFEKIYYHWLENIEDWCISRQLWWGHRIPVYYINGDQENYVVARNVEEARERVRAMTVG
DFTLEQDPDVLDTWFSSGLWPFSTMGWPDENQPDYRKFFPGSVLETGYDILFFWVARMIM
LSLELTGKIPFEVVYLHGLVRDANGRKMSKTLGNVTDPLEVISKYGTDALRFTLVTGSSA
GRDIPLAEERVAASRNFANKVWNIARFVVNAVGSDASETALWAEPSSNEWTGLSLNLADH
FILAQLTQLVHDVTQHLESFEIGDAGQKVYDFLWDDFADWYLEVAKAVLRTANGDSKAAA
PSKRILALTLDTSLRLLHPFMPFITEAAYQRLPSAVSNGHGTALMCQNWPMLRFPENQAA
VTGFRRFQELVRKVRNARASYGVEPSRRIAAWVVVRSNNELEDFITSYPSVFASLAKIDE
QQMHVVNVPPETDFIRKCVHVIVDENIEAFLPAKGLFDVQVERERLNKQVQKIGADLAGL
EKRLGARGFLQNAPPNIVEETKAKHQELKETITAIQQRLQLLEDLA
NT seq
3021 nt
NT seq
+upstream
nt +downstream
nt
atgcaacaaccggtgcgggcagtagcttttgtccaaggtggtgcgctcttgcagaggcgt
tggataagtgactcaacttgtcgtcggctcctgggagacgcttcgcaaaggaagcgtttc
gcaaaagaactctacagcgtcccgggcgtctcgctgaagagtcgtgctctgcgactctgc
tctacgacagacgctagtgggaagagtgtccagacgcccttcagaaccggctcgaggcct
gtatttgcggagaatgcggaggacgcaatgccgaaaaacttcgacccagcggcgcacgaa
gaacgcatatactcctggtgggaggctgcaggtttcttttctccaagagatgagggcgtt
ggcgatattgagaagccttttgtgatcgttatgccgcctccgaatgtcacgggcggcctt
cacatgggccacgcaatcggtacaacaatcgaagacatcttgatacgtttccatcgtatg
cgtgggcgccctaccttgtggctacccggaacggatcatgctgggattgcgactcagttg
ctcgtcgagcgagcgcttactgcctccggcaagagccgcagtgagataggcagagaagcg
ttcgttgaaatggtatggaagtggaaacaagagaagggtgggtatatcaccaagcagctc
cgaaggctcggcgccagtgctgactggaaccgggagaaattcacacttagcccagagatg
agcgcggccgtggcggaggcgtttgtgcgcctttacgatgctggtctcatctaccggggt
acgtatatggtgaactggagcccagcactgcaaacagctgtttcagacctggaggtcgag
tttagcgaagagaagggaaaactttacctattcaagtacatgttagctgaaccggggtcc
gaagaggatgccttcctaccagtcgcaacgacccgaccggaaacgattcttggcgacact
gcactttgcgttcatccctcggatggacgcttccagaaatacatcggcatgcatgccatt
gttccgtttgttcaccgccgcattccaatcgttgctgatgctcgggtggatccatcgttc
ggcacgggtgtgctgaagatcaccccaggtcatgatcgcatggattatgagataggcaaa
actcacaatctccccgtcattactgtcatcggtaaggatggcagaatcgtgccgtacagt
gagacagatgcgcggttcgtagggctggatcgcttcctctgtcgggagcggatctgggcg
gatttgcaaagcaccggccaagcgattgaggttcgggagcacacaacgagggttccccgc
tcccagcgtggcggtgagatcatcgagccactcgtatcgactcaatggtttgtgcgtacg
cggcctcttgcggaaaaggctctggctgctgttcgagagggacaaattcggatcttgccg
gaaaggttcgagaagatttactatcattggttggaaaatattgaagactggtgtatatct
cgtcagctttggtgggggcatcgcatacccgtctattacatcaatggtgatcaggaaaac
tacgtcgttgccagaaatgtagaggaggctcgcgagagggtccgcgccatgacggtcggc
gacttcaccctcgagcaggatcccgacgtgcttgatacatggttttcttctggactttgg
ccattttcgacgatgggttggcccgatgagaaccaacctgactatcgcaagttctttccg
ggttctgtcctagagaccggatacgatattctgttcttctgggttgccaggatgattatg
ctgagcctggagcttacgggcaagataccatttgaggtggtttacctccatggcctggtt
cgcgatgcgaatggaagaaagatgagcaaaacgctggggaacgtcactgatccccttgag
gtcatcagtaagtatggaaccgacgcgctgcgtttcacactcgtgacagggagcagcgcc
gggcgagatattcctctcgcagaggagcgtgtagcagcaagccgtaactttgcaaacaag
gtatggaacattgcccgcttcgtcgtgaacgcagtgggtagcgacgcatccgagacagcg
ctttgggcggagccctcgagcaatgagtggacagggctcagcttaaacctcgcggatcat
ttcattctcgcacagttaacacagcttgtacatgatgttactcagcacctggaatcattt
gaaattggcgacgctggccaaaaagtttacgattttttgtgggacgattttgcggactgg
tacttggaggttgcgaaagcagttttacggacagcgaacggcgactccaaggcggcggcg
ccatccaaacggatcctggcactcactctggacacgagtctccgtctcctgcatccattt
atgccatttataacagaggctgcgtatcagagactgccctctgcggtgagcaatggacac
ggaactgcgcttatgtgccaaaattggccgatgctacgatttccagagaatcaggctgct
gttacgggttttcgacgcttccaagagcttgtccgcaaagtgcgcaacgcccgagccagc
tacggtgtcgagccgtcgcggcgcatagcggcctgggttgtggtgcgatcgaataatgaa
ctcgaggactttatcacgtcgtatccgtcagttttcgcgtctctagccaagatagatgag
cagcagatgcacgttgtgaatgtcccgccagaaacggatttcattcgaaagtgtgtgcac
gttattgtcgacgaaaacatagaagcgttcctgccggccaaaggtttatttgacgtacaa
gttgagcgagagcgtttgaataagcaggttcaaaaaatcggcgccgatcttgccgggctc
gagaagcgactcggcgcaaggggcttcctccaaaacgcaccgccaaatattgtcgaggaa
acaaaggcaaaacaccaggagctcaaggagactatcaccgctatacagcagcgccttcag
ctgctagaggatctagcttga
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