Cyanidioschyzon merolae: CYME_CMT353C
Help
Entry
CYME_CMT353C CDS
T00175
Name
(RefSeq) unknown snf2 family helicase
KO
K11661
helicase SRCAP/SWR1 [EC:5.6.2.-]
Organism
cme
Cyanidioschyzon merolae
Pathway
cme03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cme00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
CYME_CMT353C
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cme03036
]
CYME_CMT353C
Chromosome and associated proteins [BR:
cme03036
]
Eukaryotic type
Chromatin remodeling factors
SRCAP complex
CYME_CMT353C
SWR1 complex
CYME_CMT353C
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HSA
ResIII
Myb_DNA-binding
HDA2-3
AAA_22
Motif
Other DBs
NCBI-GeneID:
16998092
NCBI-ProteinID:
XP_005539343
UniProt:
M1VID9
LinkDB
All DBs
Position
20:884500..890046
Genome browser
AA seq
1848 aa
AA seq
DB search
MNTSPRLRGQRRSDYAAYAGRRRQPASSLSCAVGAELKAAAHAEPVSPGNEIPRTTGEGE
RTGTAVQGPTTSRIDALLTKQALSDELLMSKLSDRLRELARRAAASRDEHLRQAQLLQTR
AEREQKRKLVRSHGDVRPLKRDAAGSSVLHTTAPRGTGEQASPPRSTFRDAGSMDWKSSA
EEPARLTLDEQVLQHLTKGHESGGTSTSAALEKRCQASIEALDTTVLGFSDADAASQRLA
EDRILREATEIQQRNLELAKARLPKQPEPPRSKTHHDYLCEAMIWLATDYRERFKWHAAF
RARLARAIHRFHEERKQRDARDSQAREVARIRRARLLSRHVQKFWESLFHMMIWEQQAQD
ERLAKRKRQRALDSLVHQTEDYVKVLAEELATCDSEQMVVDGEPYSTAELATGRESDRAS
QTQLPEITADTAANGTIRESDTQSLMPRATNEVHLSTSRARRPLPGCLMSSADASVDDVG
TGGYGTQRQIGSMPGTADSVYSSAQRLGDASPEDRGDGDGGTALLPTKPEVAANMSERLP
NTSLGAAAAPDVEEHSGNATQTSCAALSTKEALERPASFRSVDDALRILFRGRLRPYQHA
GLQWLIALNEKGLNGMLADDMGLGKTIQTIALLAWLATAKQDWGPHLIVVPTSVVMNWNI
EFKKFAPGLKVLCYFGTPTERAAKRRGWTKPNAFHVCVTSYHMVVQDATVFRRQQWSYLV
LDEAQHIKNFQSQKWQTLLTFHSRHRLLLTGTPLQNSLIELWSLLHFLMPNVFQSHSEFR
EWFQEPIETLIQADASVQESMVERLHRVIRPFVLRRLKRDVERELPPKTEEIVWCSLSKR
QRELYDDFMSRAATREKLLSGNYLSVMNVLIQLRKVCNHPDLFAGRPIDEPYASQRPLTI
FIPHIIRAEAASETAQRRAPRLVDESMSREDAARIRALTAAARMLAETSACPTTCSDSQA
ISRASFASLLARIDRAEQTERNQLRLVSCSRRIAEPVIGASIRQLVRVPLRSAPALHPVA
TLERLVDRALAQALPFTLVVHRAIAPVPQLVSKAAFRYQRRTACGTTSPPLAYLFGLWRP
LAIRQQLRFPDARLLQWDCGKLQRLAVLLRELEQKGHRVLIFTQMVRMLDILEQFLCLHR
FAYIRMDGSTPTGLRLRLCERFNNDRRYLVFLSTTRSGGVGLNLTGADTVLFYDSDWNPT
VDAQAQDRCHRIGQDRPVRIYRLVTEGTVEAPILRRALQKQRLEQLVLADGLFTTEVLQR
VHPLELIEGGPAPPPVHPNPYGGLEACGLTEQEYIQLERTILEAEDDEERRMRQAMELAA
SADASLDAVDFAETPAMAATRTDKPAGDTSTWWPVWHTAWRIAQHLGGPVAAAAAVAWDT
RQAPERVANTNDSNLDEGAANTSLNDEADQNSAALPLVYPPVPDPNSSGTKNGSGGLDWR
RTTRAYHSEKRSGDTAAALVMVYGPPVETPVDLILDPEAGTEDAAFFIHCYWRMAHSGAP
TALQRGRVSDVQQIASHLRNDDAFVDSLTAGLGAAAATTTTTTTTTTTRVPVAEARNAVD
RIRAPEATATAKSGARADSSTMRTLPLGPTRQVYVNLQAWLRHRVQWSFQEDAALLQAWQ
RYGSNPRLLGDILHAQASVRLGLLHRRTVREIEERLQLLLAKKITEPSALAQWHEAVSQT
RATSMRKHHRRSIQLAQRRVLGMRARLDTKRVLRTSRGDAGNNAFLDPDRAREASPRTVT
ADRAAAKRDALPKRTQTNEGARTPADAVPGAVAPAPAQVMDPRVLVPPPGTSGCGTAEAT
AAGSLVHRPGVKLEEELRRRRPFRRYIARLGPLLGFELRTSNRGLDND
NT seq
5547 nt
NT seq
+upstream
nt +downstream
nt
atgaacacgtcgccaaggttacgaggtcagcgtcgatcggactatgctgcgtatgcaggt
cgtcgacgacagcctgcatcgtcgttgtcgtgcgcggttggcgctgaactgaaagccgct
gctcatgcagagcctgtctctccaggtaacgagataccgcgcaccactggcgagggtgaa
cgtaccggtacggccgtgcaaggtccgacaacttctcggattgatgcacttctaacgaag
caggcgctttcggacgagttactgatgtcaaagcttagcgaccgtctgcgggaactggca
cggagagctgcagcctctcgtgacgagcaccttcgtcaggcgcagctcttgcaaacgcga
gctgaacgtgaacagaaacgaaagctagtgcgcagccacggtgatgtgaggcccctgaaa
cgagacgcagctggttcgagcgtgctgcacacaacagcaccacggggaaccggcgagcag
gcaagcccgcctcgctccacgttccgggacgctggctccatggactggaagtcgagcgcg
gaggagccagcccgactgactctagacgagcaggttttgcaacatttaacaaaaggtcat
gaatcgggaggaacctccacgtctgcggctttagagaagcgctgtcaggcgtccatcgag
gccctcgataccactgttctgggtttttctgatgctgatgctgcgtcgcagcgcctagcg
gaggaccgcatactgcgtgaagccaccgaaatccaacagcgcaacctggagcttgcgaaa
gcgcgcctgccgaagcaaccggaaccgccgcgctcgaagacacaccacgactatctctgt
gaggcgatgatctggctagccactgattatcgagagcgcttcaagtggcacgctgctttt
cgagcacgactcgctcgcgctatccacagatttcatgaagaacggaagcagcgggacgca
cgtgactcccaggcacgagaggtcgcgcgtatacgacgagctcgcctgttgagtcggcac
gttcaaaagttctgggagtcactcttccatatgatgatatgggaacagcaggcacaggac
gagcgccttgcaaagcgcaaacgacaacgggctttggattcccttgttcaccagactgaa
gactacgtcaaggtcctggcagaagaactagcgacttgtgactcggaacagatggttgtg
gatggagagccatattctaccgcggaacttgcgacaggaagggaatcggatcgggcatcg
caaacgcagctcccggagataaccgcagataccgcagcgaatggaacgatacgcgagtcg
gatacgcagtctctgatgccgcgcgctaccaacgaagtgcacttgtcgacgagccgagca
cgaaggccacttcctggttgcttgatgagcagcgcggacgcatcagttgatgatgttggt
actggcggttacggaacgcagcgacaaattggatcgatgccagggactgcggattcggtc
tactccagtgcgcagcgactgggagacgcctcgcccgaagatcgtggtgatggtgatggc
ggtacagcactgctaccaacgaaaccggaagtagctgcgaacatgtccgaaaggttgcca
aatacatcgctgggagcagccgctgcacccgatgttgaagagcattcgggaaacgcaacc
cagaccagctgtgctgcactgtccacgaaagaggcacttgagcggccggcatcgttccgc
tccgtggacgacgctttgcgtattctctttcgaggccgcttgcgcccctatcaacacgcc
ggcctacaatggctcattgccttgaacgagaagggtctcaatggtatgctggcagacgac
atgggcctgggcaagaccatccagacaatagcgctgttggcttggctggcaactgcaaaa
caggactggggtccgcatctgatcgtggtacccacctctgtggtcatgaattggaacatt
gaattcaaaaagttcgccccaggcctcaaggtgctttgttatttcgggacgcccaccgaa
cgagctgccaagcgccgcggctggaccaaacccaatgctttccacgtttgtgtcacgtct
taccacatggtggtgcaggacgccaccgtctttcgtcgacagcaatggagctatctcgtg
ctcgatgaagcgcaacacatcaagaactttcagagccaaaaatggcagacattgctcacc
ttccattcgcggcatcgtttactgctgaccggaacgccgctgcagaactcgctgatagaa
ttgtggtcgctgttacatttcctcatgccaaatgttttccaaagccatagcgaattccgg
gagtggtttcaggaacctatcgagacgctcattcaagccgatgcaagcgtccaggagagc
atggttgaacgtctgcaccgcgttattcgtccctttgtgcttcgacgcctgaagcgcgac
gtggagcgtgagctgcccccgaaaaccgaggaaattgtctggtgttcactaagcaaacgg
caacgagagctctacgatgactttatgagtcgagcagctacgcgggagaagctactcagc
ggaaattacctgtctgtgatgaatgtgctcatccagctgcgcaaggtttgtaaccatccg
gacttgtttgcagggcgacccatcgacgagccctacgcaagtcaacgaccgctgacgatc
ttcattccgcacatcatacgagcagaagcagcgtctgagacggcgcagcgccgggcaccc
cgcctcgtcgatgaatccatgtctcgcgaggacgctgctcggatacgagcccttaccgcc
gccgcgcgaatgctcgcagagacttcagcgtgtccgacgacatgctccgattcgcaggcc
atatcgcgggcatcgtttgcgagtctcctagctcggatcgacagagccgagcaaacggaa
cgcaaccagttgcgtctggtatcatgtagtcgacgcatcgcggagccagttataggggcg
agtattcggcaactcgtgcgggtgcctttgcgctcagcacctgcgctgcatccagtggcc
acgctggagcgccttgttgaccgagcgttagcgcaggcgttgccgtttacgctggtggtg
catcgcgcgatcgcaccggtgccgcagctcgtaagcaaggcagcttttcgttaccagaga
cgaacagcttgtgggaccacatcaccgcctctagcgtatttgttcggtttgtggcgaccg
ttggcgattcgtcagcaactgcgcttcccggatgcgcggctgctgcagtgggactgcggg
aaactccagcgccttgctgtcctgttgagagaactggaacaaaaagggcatcgagtgctc
atatttactcaaatggtacgaatgctcgatattcttgaacaatttctctgcctgcatcgc
tttgcctacattcgcatggacgggagcacgcccacgggtttgcgtctacgcctctgtgag
cgtttcaacaacgatcggcgctatctggtgtttctctccactacgcgtagcggaggtgtc
ggcttgaacctcaccggtgccgatacggtgctcttctacgactcggactggaaccccacg
gttgatgcgcaggcccaagaccgctgtcatcgcatcggacaggatcggccggtgcgaatc
taccggctcgtgacggaaggcaccgtggaggctccgatacttcgtcgagcgctgcagaag
caacgcctggaacaactggtactcgcggatggtctcttcacgaccgaggtattgcagcgg
gtccatccactggaactgatcgagggaggtccggcgccgcctcctgtgcacccgaatcca
tacggaggactggaggcgtgcggcctcaccgagcaggagtacatacagctagagcgcacg
atactcgaggctgaggacgacgaggagcgacggatgcgccaggccatggagttggcagcg
tctgctgacgccagtctggatgcagtggactttgccgaaacgcccgccatggccgctact
cgtacggacaagcccgctggggacacttcgacctggtggcctgtttggcacactgcgtgg
cgaatcgcgcagcatctcggaggacctgtggcagcagcagcagcagtagcatgggataca
aggcaggcaccggaacgtgttgccaacacgaacgactccaacctcgacgaaggtgctgca
aacacatctttgaatgatgaagccgatcagaacagtgcagcgctacctttggtgtatcca
cctgttccggatccgaacagttcgggaacaaaaaacggatccgggggtctcgactggcgg
cgtacgactcgcgcgtaccatagcgagaagcgtagcggcgacacggcggcggcgctggtg
atggtgtacgggccgcccgtcgagacccccgttgatttgatcctcgaccccgaggctggc
accgaagacgcggcgttttttattcactgctattggcgaatggcgcattctggagcccca
actgcgctccagcgcggacgagtaagtgacgtgcagcaaatcgcttcgcatctgcgcaac
gacgacgcatttgtcgattcattgactgctggcttgggggcagcagcagcaacaacaaca
acaacaacaactacgactactacacgagtacctgttgcagaagcgcgtaacgctgtcgat
cgcattcgggcccccgaggcgactgcgactgccaaatccggagctcgtgccgactcgagt
accatgcggacattgccgctaggcccaacacgccaggtctatgtgaacctacaggcctgg
ttacgtcatcgagtgcagtggtcgttccaggaagatgccgcgctgctccaggcgtggcag
cgctacggctccaatcctcgactgttgggggatatcctccatgcgcaagcaagcgtccgt
cttggtctattgcaccgtcgtacggtcagagagattgaggagcggctgcagctcttgctt
gcgaagaagattacagaaccgagtgccttagcgcagtggcatgaggccgtctcgcagacg
cgagcgacctcgatgcgaaaacaccatcgtcgctcgattcagctggcccagcgtcgcgtg
ctgggcatgcgagctcgcttggacaccaagcgagtgctccgaacgtcacgcggggacgct
ggaaacaacgcttttctggacccggacagggcacgcgaggcatccccgcgaacggtgaca
gcagaccgcgcagcagcgaaacgcgacgctcttccaaagcgtacgcaaacaaacgaggga
gcccgaacccccgctgatgctgttcctggagcggtggcaccagctcctgcccaagtcatg
gatccgcgagtgttggttccaccgccgggcaccagcggctgcggcactgcagaggcaacg
gccgctgggagccttgtccatcgcccgggggtgaaactcgaagaggaacttcgtcggagg
cgtccttttcgtcgctacattgccagactgggtccgctgcttggtttcgagttgcgaacc
tcgaatcggggcctcgacaacgactaa
DBGET
integrated database retrieval system