KEGG   Cyanidioschyzon merolae: CYME_CMT353C
Entry
CYME_CMT353C      CDS       T00175                                 
Name
(RefSeq) unknown snf2 family helicase
  KO
K11661  helicase SRCAP/SWR1 [EC:5.6.2.-]
Organism
cme  Cyanidioschyzon merolae
Pathway
cme03082  ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:cme00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    CYME_CMT353C
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:cme03036]
    CYME_CMT353C
Chromosome and associated proteins [BR:cme03036]
 Eukaryotic type
  Chromatin remodeling factors
   SRCAP complex
    CYME_CMT353C
   SWR1 complex
    CYME_CMT353C
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C HSA ResIII Myb_DNA-binding HDA2-3 AAA_22
Other DBs
NCBI-GeneID: 16998092
NCBI-ProteinID: XP_005539343
UniProt: M1VID9
LinkDB
Position
20:884500..890046
AA seq 1848 aa
MNTSPRLRGQRRSDYAAYAGRRRQPASSLSCAVGAELKAAAHAEPVSPGNEIPRTTGEGE
RTGTAVQGPTTSRIDALLTKQALSDELLMSKLSDRLRELARRAAASRDEHLRQAQLLQTR
AEREQKRKLVRSHGDVRPLKRDAAGSSVLHTTAPRGTGEQASPPRSTFRDAGSMDWKSSA
EEPARLTLDEQVLQHLTKGHESGGTSTSAALEKRCQASIEALDTTVLGFSDADAASQRLA
EDRILREATEIQQRNLELAKARLPKQPEPPRSKTHHDYLCEAMIWLATDYRERFKWHAAF
RARLARAIHRFHEERKQRDARDSQAREVARIRRARLLSRHVQKFWESLFHMMIWEQQAQD
ERLAKRKRQRALDSLVHQTEDYVKVLAEELATCDSEQMVVDGEPYSTAELATGRESDRAS
QTQLPEITADTAANGTIRESDTQSLMPRATNEVHLSTSRARRPLPGCLMSSADASVDDVG
TGGYGTQRQIGSMPGTADSVYSSAQRLGDASPEDRGDGDGGTALLPTKPEVAANMSERLP
NTSLGAAAAPDVEEHSGNATQTSCAALSTKEALERPASFRSVDDALRILFRGRLRPYQHA
GLQWLIALNEKGLNGMLADDMGLGKTIQTIALLAWLATAKQDWGPHLIVVPTSVVMNWNI
EFKKFAPGLKVLCYFGTPTERAAKRRGWTKPNAFHVCVTSYHMVVQDATVFRRQQWSYLV
LDEAQHIKNFQSQKWQTLLTFHSRHRLLLTGTPLQNSLIELWSLLHFLMPNVFQSHSEFR
EWFQEPIETLIQADASVQESMVERLHRVIRPFVLRRLKRDVERELPPKTEEIVWCSLSKR
QRELYDDFMSRAATREKLLSGNYLSVMNVLIQLRKVCNHPDLFAGRPIDEPYASQRPLTI
FIPHIIRAEAASETAQRRAPRLVDESMSREDAARIRALTAAARMLAETSACPTTCSDSQA
ISRASFASLLARIDRAEQTERNQLRLVSCSRRIAEPVIGASIRQLVRVPLRSAPALHPVA
TLERLVDRALAQALPFTLVVHRAIAPVPQLVSKAAFRYQRRTACGTTSPPLAYLFGLWRP
LAIRQQLRFPDARLLQWDCGKLQRLAVLLRELEQKGHRVLIFTQMVRMLDILEQFLCLHR
FAYIRMDGSTPTGLRLRLCERFNNDRRYLVFLSTTRSGGVGLNLTGADTVLFYDSDWNPT
VDAQAQDRCHRIGQDRPVRIYRLVTEGTVEAPILRRALQKQRLEQLVLADGLFTTEVLQR
VHPLELIEGGPAPPPVHPNPYGGLEACGLTEQEYIQLERTILEAEDDEERRMRQAMELAA
SADASLDAVDFAETPAMAATRTDKPAGDTSTWWPVWHTAWRIAQHLGGPVAAAAAVAWDT
RQAPERVANTNDSNLDEGAANTSLNDEADQNSAALPLVYPPVPDPNSSGTKNGSGGLDWR
RTTRAYHSEKRSGDTAAALVMVYGPPVETPVDLILDPEAGTEDAAFFIHCYWRMAHSGAP
TALQRGRVSDVQQIASHLRNDDAFVDSLTAGLGAAAATTTTTTTTTTTRVPVAEARNAVD
RIRAPEATATAKSGARADSSTMRTLPLGPTRQVYVNLQAWLRHRVQWSFQEDAALLQAWQ
RYGSNPRLLGDILHAQASVRLGLLHRRTVREIEERLQLLLAKKITEPSALAQWHEAVSQT
RATSMRKHHRRSIQLAQRRVLGMRARLDTKRVLRTSRGDAGNNAFLDPDRAREASPRTVT
ADRAAAKRDALPKRTQTNEGARTPADAVPGAVAPAPAQVMDPRVLVPPPGTSGCGTAEAT
AAGSLVHRPGVKLEEELRRRRPFRRYIARLGPLLGFELRTSNRGLDND
NT seq 5547 nt   +upstreamnt  +downstreamnt
atgaacacgtcgccaaggttacgaggtcagcgtcgatcggactatgctgcgtatgcaggt
cgtcgacgacagcctgcatcgtcgttgtcgtgcgcggttggcgctgaactgaaagccgct
gctcatgcagagcctgtctctccaggtaacgagataccgcgcaccactggcgagggtgaa
cgtaccggtacggccgtgcaaggtccgacaacttctcggattgatgcacttctaacgaag
caggcgctttcggacgagttactgatgtcaaagcttagcgaccgtctgcgggaactggca
cggagagctgcagcctctcgtgacgagcaccttcgtcaggcgcagctcttgcaaacgcga
gctgaacgtgaacagaaacgaaagctagtgcgcagccacggtgatgtgaggcccctgaaa
cgagacgcagctggttcgagcgtgctgcacacaacagcaccacggggaaccggcgagcag
gcaagcccgcctcgctccacgttccgggacgctggctccatggactggaagtcgagcgcg
gaggagccagcccgactgactctagacgagcaggttttgcaacatttaacaaaaggtcat
gaatcgggaggaacctccacgtctgcggctttagagaagcgctgtcaggcgtccatcgag
gccctcgataccactgttctgggtttttctgatgctgatgctgcgtcgcagcgcctagcg
gaggaccgcatactgcgtgaagccaccgaaatccaacagcgcaacctggagcttgcgaaa
gcgcgcctgccgaagcaaccggaaccgccgcgctcgaagacacaccacgactatctctgt
gaggcgatgatctggctagccactgattatcgagagcgcttcaagtggcacgctgctttt
cgagcacgactcgctcgcgctatccacagatttcatgaagaacggaagcagcgggacgca
cgtgactcccaggcacgagaggtcgcgcgtatacgacgagctcgcctgttgagtcggcac
gttcaaaagttctgggagtcactcttccatatgatgatatgggaacagcaggcacaggac
gagcgccttgcaaagcgcaaacgacaacgggctttggattcccttgttcaccagactgaa
gactacgtcaaggtcctggcagaagaactagcgacttgtgactcggaacagatggttgtg
gatggagagccatattctaccgcggaacttgcgacaggaagggaatcggatcgggcatcg
caaacgcagctcccggagataaccgcagataccgcagcgaatggaacgatacgcgagtcg
gatacgcagtctctgatgccgcgcgctaccaacgaagtgcacttgtcgacgagccgagca
cgaaggccacttcctggttgcttgatgagcagcgcggacgcatcagttgatgatgttggt
actggcggttacggaacgcagcgacaaattggatcgatgccagggactgcggattcggtc
tactccagtgcgcagcgactgggagacgcctcgcccgaagatcgtggtgatggtgatggc
ggtacagcactgctaccaacgaaaccggaagtagctgcgaacatgtccgaaaggttgcca
aatacatcgctgggagcagccgctgcacccgatgttgaagagcattcgggaaacgcaacc
cagaccagctgtgctgcactgtccacgaaagaggcacttgagcggccggcatcgttccgc
tccgtggacgacgctttgcgtattctctttcgaggccgcttgcgcccctatcaacacgcc
ggcctacaatggctcattgccttgaacgagaagggtctcaatggtatgctggcagacgac
atgggcctgggcaagaccatccagacaatagcgctgttggcttggctggcaactgcaaaa
caggactggggtccgcatctgatcgtggtacccacctctgtggtcatgaattggaacatt
gaattcaaaaagttcgccccaggcctcaaggtgctttgttatttcgggacgcccaccgaa
cgagctgccaagcgccgcggctggaccaaacccaatgctttccacgtttgtgtcacgtct
taccacatggtggtgcaggacgccaccgtctttcgtcgacagcaatggagctatctcgtg
ctcgatgaagcgcaacacatcaagaactttcagagccaaaaatggcagacattgctcacc
ttccattcgcggcatcgtttactgctgaccggaacgccgctgcagaactcgctgatagaa
ttgtggtcgctgttacatttcctcatgccaaatgttttccaaagccatagcgaattccgg
gagtggtttcaggaacctatcgagacgctcattcaagccgatgcaagcgtccaggagagc
atggttgaacgtctgcaccgcgttattcgtccctttgtgcttcgacgcctgaagcgcgac
gtggagcgtgagctgcccccgaaaaccgaggaaattgtctggtgttcactaagcaaacgg
caacgagagctctacgatgactttatgagtcgagcagctacgcgggagaagctactcagc
ggaaattacctgtctgtgatgaatgtgctcatccagctgcgcaaggtttgtaaccatccg
gacttgtttgcagggcgacccatcgacgagccctacgcaagtcaacgaccgctgacgatc
ttcattccgcacatcatacgagcagaagcagcgtctgagacggcgcagcgccgggcaccc
cgcctcgtcgatgaatccatgtctcgcgaggacgctgctcggatacgagcccttaccgcc
gccgcgcgaatgctcgcagagacttcagcgtgtccgacgacatgctccgattcgcaggcc
atatcgcgggcatcgtttgcgagtctcctagctcggatcgacagagccgagcaaacggaa
cgcaaccagttgcgtctggtatcatgtagtcgacgcatcgcggagccagttataggggcg
agtattcggcaactcgtgcgggtgcctttgcgctcagcacctgcgctgcatccagtggcc
acgctggagcgccttgttgaccgagcgttagcgcaggcgttgccgtttacgctggtggtg
catcgcgcgatcgcaccggtgccgcagctcgtaagcaaggcagcttttcgttaccagaga
cgaacagcttgtgggaccacatcaccgcctctagcgtatttgttcggtttgtggcgaccg
ttggcgattcgtcagcaactgcgcttcccggatgcgcggctgctgcagtgggactgcggg
aaactccagcgccttgctgtcctgttgagagaactggaacaaaaagggcatcgagtgctc
atatttactcaaatggtacgaatgctcgatattcttgaacaatttctctgcctgcatcgc
tttgcctacattcgcatggacgggagcacgcccacgggtttgcgtctacgcctctgtgag
cgtttcaacaacgatcggcgctatctggtgtttctctccactacgcgtagcggaggtgtc
ggcttgaacctcaccggtgccgatacggtgctcttctacgactcggactggaaccccacg
gttgatgcgcaggcccaagaccgctgtcatcgcatcggacaggatcggccggtgcgaatc
taccggctcgtgacggaaggcaccgtggaggctccgatacttcgtcgagcgctgcagaag
caacgcctggaacaactggtactcgcggatggtctcttcacgaccgaggtattgcagcgg
gtccatccactggaactgatcgagggaggtccggcgccgcctcctgtgcacccgaatcca
tacggaggactggaggcgtgcggcctcaccgagcaggagtacatacagctagagcgcacg
atactcgaggctgaggacgacgaggagcgacggatgcgccaggccatggagttggcagcg
tctgctgacgccagtctggatgcagtggactttgccgaaacgcccgccatggccgctact
cgtacggacaagcccgctggggacacttcgacctggtggcctgtttggcacactgcgtgg
cgaatcgcgcagcatctcggaggacctgtggcagcagcagcagcagtagcatgggataca
aggcaggcaccggaacgtgttgccaacacgaacgactccaacctcgacgaaggtgctgca
aacacatctttgaatgatgaagccgatcagaacagtgcagcgctacctttggtgtatcca
cctgttccggatccgaacagttcgggaacaaaaaacggatccgggggtctcgactggcgg
cgtacgactcgcgcgtaccatagcgagaagcgtagcggcgacacggcggcggcgctggtg
atggtgtacgggccgcccgtcgagacccccgttgatttgatcctcgaccccgaggctggc
accgaagacgcggcgttttttattcactgctattggcgaatggcgcattctggagcccca
actgcgctccagcgcggacgagtaagtgacgtgcagcaaatcgcttcgcatctgcgcaac
gacgacgcatttgtcgattcattgactgctggcttgggggcagcagcagcaacaacaaca
acaacaacaactacgactactacacgagtacctgttgcagaagcgcgtaacgctgtcgat
cgcattcgggcccccgaggcgactgcgactgccaaatccggagctcgtgccgactcgagt
accatgcggacattgccgctaggcccaacacgccaggtctatgtgaacctacaggcctgg
ttacgtcatcgagtgcagtggtcgttccaggaagatgccgcgctgctccaggcgtggcag
cgctacggctccaatcctcgactgttgggggatatcctccatgcgcaagcaagcgtccgt
cttggtctattgcaccgtcgtacggtcagagagattgaggagcggctgcagctcttgctt
gcgaagaagattacagaaccgagtgccttagcgcagtggcatgaggccgtctcgcagacg
cgagcgacctcgatgcgaaaacaccatcgtcgctcgattcagctggcccagcgtcgcgtg
ctgggcatgcgagctcgcttggacaccaagcgagtgctccgaacgtcacgcggggacgct
ggaaacaacgcttttctggacccggacagggcacgcgaggcatccccgcgaacggtgaca
gcagaccgcgcagcagcgaaacgcgacgctcttccaaagcgtacgcaaacaaacgaggga
gcccgaacccccgctgatgctgttcctggagcggtggcaccagctcctgcccaagtcatg
gatccgcgagtgttggttccaccgccgggcaccagcggctgcggcactgcagaggcaacg
gccgctgggagccttgtccatcgcccgggggtgaaactcgaagaggaacttcgtcggagg
cgtccttttcgtcgctacattgccagactgggtccgctgcttggtttcgagttgcgaacc
tcgaatcggggcctcgacaacgactaa

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