Cyanidioschyzon merolae: CYME_CMT390C
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Entry
CYME_CMT390C CDS
T00175
Name
(RefSeq) hypothetical protein
KO
K15454
tRNA pseudouridine32 synthase [EC:
5.4.99.28
]
Organism
cme
Cyanidioschyzon merolae
Brite
KEGG Orthology (KO) [BR:
cme00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cme03016
]
CYME_CMT390C
Enzymes [BR:
cme01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.28 tRNA pseudouridine32 synthase
CYME_CMT390C
Transfer RNA biogenesis [BR:
cme03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CYME_CMT390C
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-GeneID:
16998137
NCBI-ProteinID:
XP_005539375
UniProt:
M1VCT3
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All DBs
Position
20:971593..972822
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AA seq
409 aa
AA seq
DB search
MAGGRPCLLFGVACPALCIPSTPPVVVTNWRSLRYVAPYLFTYRVNVKERWLGTTLTDVF
TKEFYGTREFWANQMKHGRLLVNGASIAADYVLQPADTILNTVHFHEAPVSATDVPRVID
EQPDWVAVYKPAGIPTHVSGQFRYHSLTAWLSRLLSEHHQRTAPALYTLYRLDRVTSGVV
VFAKNVELARRWHQHASGGNRSVPRHRKVYLARLQGRFREALTCRVPLRLDRGEQGYARS
FPDFQSGKASITLFKPLGYDTRTDTSLVECVPVTGRTHQIRAHAAFLGHPVANDALYGGT
LAADEYTTVVADAIAGMLGTGESRSSAEPTLMQLFPDLQVADPLCHHCPYAAPVRWREDP
LYRQLGIWLHALSYRYDDDDNAPTARFSWHAQTEWPSWAQNCALETDLA
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atggccggcggaagaccatgtttgttgtttggtgtcgcttgtccagctctttgcatcccg
tcgacacctccggtggtggtcacgaactggagaagtctccgctacgtcgcgccgtacctc
tttacgtaccgtgtcaacgtgaaagagcgctggctcggaacgactctgaccgatgtcttc
acgaaagagttctatggaacgagagagttctgggcgaaccaaatgaagcacgggaggctc
ctggtcaacggagcgtcaattgcggcagactacgtgctgcagccggctgacacaatcctg
aatacggtacactttcacgaggcgccggtttcagccactgatgtaccacgagtcatcgac
gagcaaccggactgggttgcggtttacaaacctgctggcatacccacacacgtcagtggt
caattccggtaccattccttgacagcatggctgagccgtctcctgagcgagcaccaccaa
cgcacagcgccggccctgtacaccctctaccgcctcgatcgagtgacatccggagtcgtg
gtatttgccaagaacgtcgagctcgcgcgacgatggcatcagcatgcctcgggaggcaac
cggtctgtgccacgccatcgtaaggtctatctggcgcgccttcagggccgctttcgcgaa
gcacttacctgcagagtgccgctgcgcctcgatcgaggcgaacaaggatatgctcgttcg
ttccccgatttccaatcagggaaggcttccatcacactgttcaagcctctgggctatgat
acgcgaacggacacgagcctcgtggagtgtgtacctgtcaccggacgtacacatcagatc
cgggcgcacgctgcgttcctcggtcatccggtggcgaacgatgcgctctatggaggcacg
ctcgctgcagatgaatacaccacggtcgttgccgatgctatcgccggcatgttgggcact
ggggagtcgagatcatcggcagagccgacgctgatgcagctctttcccgatttgcaggtc
gcagatccactctgtcatcactgtccgtacgctgcgcctgttcggtggcgcgaggacccg
ctctatcggcagctgggcatctggttgcacgcgctctcctaccgctatgatgatgatgat
aacgcgccgacagctcgctttagttggcatgcccagaccgagtggccatcttgggctcag
aactgcgctttagaaaccgatctcgcctga
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