Cyanidioschyzon merolae: CYME_CMT453C
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Entry
CYME_CMT453C CDS
T00175
Name
(RefSeq) similar to nucleolar RNA-associated protein NRAP
KO
K14544
U3 small nucleolar RNA-associated protein 22
Organism
cme
Cyanidioschyzon merolae
Pathway
cme03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cme00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
CYME_CMT453C
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cme03009
]
CYME_CMT453C
Ribosome biogenesis [BR:
cme03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
CYME_CMT453C
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nrap_D5
Nrap_D3
Nrap_D6
Nrap
Motif
Other DBs
NCBI-GeneID:
16998140
NCBI-ProteinID:
XP_005539424
UniProt:
M1VMP1
LinkDB
All DBs
Position
20:1136560..1139712
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AA seq
1050 aa
AA seq
DB search
MHVALNAFEGLTWESRARVLLAAAQVSLPADTGAFLQQIRAALEALDPRRLESPDEIAGL
LKSQKLFSGDLEPVHLDQMRLHSVAYLAPSRVELVGSYALGTVVALPEPPLVDVAFEVPR
KFLLEKDYLDGRYHVRRLVYLAEVVRQLRDRVPDLEATWVPSNSFTRSENPLLHAALQKP
VVVLSSPKVSGRIRLLPALTPDKFPKLMQRPELYCFRAFQDLPQENERIALNTHYVNSIR
SDWSIWADFDLLVATTKRYAIVSDCVRLLKLWSANRQLTLIEPVEAARRLVSGHELALQT
AQLVEQGEFPAHAASLSRLVLAVFRAIRARLPVEPSIVRVEVEAALRSFASRLRELDQVG
GIYYTLAGCCMEPLAYFDSILQVTQRRSAKRNPRDATLDTLRGEWLQRVFRTLRRALGDR
VAYLGVLPRRQHANTNFVQVGIKWQPQNMLRTIDRDPDEQFWGSGRLEWRRFRSGEILHC
LVWAESSIERFQIPQRIVDAALKKEPDAQAKGNTLWLLEERHTPGLWTREHLDLRRWRYV
KDPRSLALYQARCVLLGKMYQALCQLLMDADGAIGISKVLPLRVQAVHVAVNDGEWLRHT
AVEWPELQENLQGRWASRYRLTAHVELESTHLWPDATESADAAQAVRVAFTIALYRALKR
GLRKHAERLPVPVRFIQATRHGDLLLLLGCFPIRLRVCSAAEAVSMSAAFRLHAQLSSIS
SRFPAFGPTARLAKRFLAAHGLVDLAGIDGLSPAAVELLLSRLFTDPLPWGDCPATAWGG
LVRFLHLIAKTETALTEPLVIPILNLSEDEPPWYPETGGLESSVASKHCWLRLCTASDPC
GTLLTKQVAAEVVRRMRLVCRAALQHLGDALHQDGGLEPDHLGVIFRPPPLASFCDLVLE
LEHALVPEQVIVDSGLGVADREVHAPDELRQRFGIADATTEQWLVGFDPIGMYLRWLREM
FGDLWVFLYDAYGGRWIGGIWRSAASQPALSLDVSRTSYRRVVKSGARIPADSRLEWNLP
EILHDMHAVGAGLVREIRLCGQLTGACSGY
NT seq
3153 nt
NT seq
+upstream
nt +downstream
nt
atgcacgttgcactgaacgccttcgaggggctcacgtgggagtcgcgcgctcgagtgctt
ctcgcagccgctcaggtgtcgttaccagcggacaccggtgcctttctgcagcagatccgt
gcagctttggaggcgctggatcctcggcgactagaatctccggacgagatcgcgggtctt
ttgaagagtcagaaattgttttctggtgatctggagccggttcacctcgaccaaatgcgt
ctccattctgtcgcatatctggcaccgtcgcgggttgagctggtcggcagctacgcgctg
ggtacggtggttgcgctgcctgagccgccgctggttgacgttgccttcgaagttccgcgg
aaattcttgctcgaaaaggattacctcgatggacggtaccacgtcaggcggcttgtgtat
ctcgcagaggttgttcgacaacttcgcgaccgtgttcccgatcttgaagcgacttgggta
ccatcgaattctttcacgagatccgagaatccgctcctgcatgccgcgttacagaaacca
gtagtcgtgctctcatctccgaaggtatctggtaggattcgcttgttgcctgccctaact
cctgataagtttccgaagctgatgcagcgccctgagctatactgctttcgagcatttcaa
gatttgccgcaggagaatgagcgcattgctctgaacacgcattatgtcaacagcatccgc
agcgactggagcatctgggcggattttgacttgcttgtggcgacaaccaagcgctacgca
attgtgtcggattgtgtgcgtctcctcaaactctggtcagcgaaccgacaactgacgctg
atagaacccgtggaggcggctcgcaggctcgtatcgggccacgaactcgctctgcagact
gctcagctggtggaacagggcgaattccctgctcacgccgcctccctgagtcgactggtg
ttggcagtgttccgagcgatacgagctcgcctgcctgtcgaacccagtatcgtgcgggtt
gaagtggaagcagcgctgcgctcgtttgcgagtcgattgcgtgagctggaccaagttggc
ggcatttactacacgcttgctggctgctgcatggagccgctcgcgtacttcgatagcatc
ttgcaggtaacgcagcgacgatcggcgaaacgaaacccacgcgatgctactctcgacacc
cttcgaggagaatggttacagcgagtgtttcgaacgctgcgccgagcgctcggtgatcgt
gtggcgtatctgggggtgctcccacgaagacagcacgcgaataccaacttcgtacaggtc
ggcatcaaatggcagccacaaaatatgttgcgaacgattgatcgtgaccccgatgagcag
ttttggggcagcgggcgtctcgaatggcgtcgcttccgatccggggagattttgcattgc
ctcgtgtgggccgagtccagtattgaacgcttccagataccccagcgaattgtggatgca
gcgctgaagaaggagccagatgcacaggccaaagggaacacgctctggttgctcgaggag
cgacacacgcccgggctttggacccgcgaacacctggacctccgccgttggcgctacgtg
aaggatccccgctcgctcgcattgtatcaggcccgttgtgtacttttgggaaagatgtat
caagcgctttgccagcttctcatggacgcagacggtgcgattggtatcagcaaggtcttg
ccgctgcgggtacaggccgtgcacgttgcggtgaacgacggtgaatggctccgccatacc
gcagtggaatggccggagctccaggagaacctccagggacgatgggcgagtcgataccgt
ctcaccgcacacgtcgagctggagagcacccatttatggcccgatgcaaccgagtcagcg
gatgccgctcaggcagttcgagttgctttcacgattgcgctgtatcgcgcactgaaacga
ggtctgcggaagcacgcagaacgcttaccggtgccagtgcgtttcatacaggccaccaga
catggcgacctgctgctgctgctgggctgcttccccatccgtcttcgagtctgttcggcc
gctgaggctgtttcgatgtccgctgcgtttcgccttcacgctcagctatcatcgatctcg
agtcgattcccggcttttgggccaacagcacggctcgcgaagcgctttctcgctgcgcat
ggtcttgtggatctggcgggtatcgacggcttgtctcctgccgcagtggaattgctctta
tcgcgtctttttaccgatccgctcccctggggagactgtccggcgactgcctggggcggc
ctcgttcgcttcctgcacctgatcgccaaaactgagacggcgttaacagagccgctggtg
atccccattttgaacctgtccgaggatgagccaccctggtatccagaaaccggtggactc
gagtcgtctgtcgcttccaagcattgttggctccgtttgtgtactgcaagcgatccttgt
ggcacgttgctcacgaagcaagtcgctgcggaagttgttcgtcgtatgagattggtgtgc
agggcggccttgcaacatctgggtgacgccctgcaccaggacggcggcctagagccagac
catctcggggtcatcttccgtccgcctccgctagcttcattctgtgatctggtgctggag
ctcgaacacgctctggtgcccgaacaagtcatcgtagactccggcctgggtgtagcggac
cgtgaggtgcacgctcctgacgagttgcggcagcgtttcggtatcgcggacgcaaccaca
gagcaatggcttgttggtttcgatccgatcggtatgtatctccgttggttgcgagagatg
ttcggagacctctgggtgtttctgtacgacgcctatggaggccgctggattgggggtatc
tggcgcagcgcagcgtcgcaaccagccctgtccctagatgttagccgcacaagctatcgt
cgcgtggtcaagtctggcgcgcgcataccagccgactcgcgactagaatggaacttgcct
gaaatactacatgacatgcatgctgttggcgccggacttgtgcgggaaattcgtctttgt
ggacaactcactggtgcgtgcagcggatactga
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