Cyanidioschyzon merolae: CYME_CMT492C
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Entry
CYME_CMT492C CDS
T00175
Name
(RefSeq) similar to 3-methyladenine DNA glycosylase AlkA
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
cme
Cyanidioschyzon merolae
Pathway
cme03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cme00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CYME_CMT492C
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cme03400
]
CYME_CMT492C
Enzymes [BR:
cme01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
CYME_CMT492C
DNA repair and recombination proteins [BR:
cme03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CYME_CMT492C
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
Motif
Other DBs
NCBI-GeneID:
16998194
NCBI-ProteinID:
XP_005539456
UniProt:
M1V7V5
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All DBs
Position
20:1234742..1235623
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AA seq
293 aa
AA seq
DB search
MPAHHLSAKWRQVKTKRTRKTPATVAPKSVALPETVRQRLEQARREAIDFAALEYLYASV
PPLRSVIDAHPPPHFLACDVFTVLVQAIVWQQVSARAAAKLWPRLVEVLETQVPGSIRRS
MPHLYVNPGPLASIPDPALLRAAGIPQSRCAAIVEAARAFHAKPDLYHNWNDSIEDDEVV
RRLCCLRGVGEWTAHMVLMFAMRRMNVLPVGDLGVRRGFAVVFDLKPDARREQGAAGRRS
VLPSPDAVKKFASSAACGNGRFLTVVSYYMWRAAGADVLVPDGTLVPDLASTV
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atgccagcgcaccatctgagcgccaaatggcgccaagtgaagacgaaacggactcggaag
acccccgccactgtggcgccgaagagcgtcgccttgccagagaccgttcgacaacggctc
gagcaggcgcggcgcgaagcgatcgactttgccgcgctcgagtacctgtacgccagcgta
ccacctctacgctctgttatcgacgcacatccgcctccgcactttcttgcatgcgatgtg
ttcacggtgctcgtccaggctattgtctggcagcaggtgagtgcacgggcggctgctaaa
ctttggccgagactcgtcgaggttctcgaaacgcaggtacctggatcaatccgccgttcg
atgccgcatctctacgtgaatcctggtccgttggcgagcattccggatcctgcgcttttg
cgcgctgccggcattccgcaaagtcgctgtgcagcgatcgtcgaggcggctcgtgctttt
cacgcgaaaccggacctctaccataactggaacgactccatcgaagatgacgaagtcgtt
cggagactgtgttgcctccgaggtgttggtgaatggacggctcacatggtgctcatgttc
gcgatgcgtcggatgaatgtgctgcccgtaggggatcttggcgtgcgacgcggctttgca
gtggttttcgatctcaagccagatgccagacgggaacaaggcgctgcaggtcgccgttcg
gtgttgccgtcaccggatgcggtaaagaaatttgcctcgagtgcggcatgcggcaatggg
cgttttctcacagttgtttcctattacatgtggcgggctgcgggtgctgatgttctcgtt
cccgacggaacgctcgtaccagacctcgctagcactgtctga
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