Cyanidioschyzon merolae: CYME_CMT501C
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Entry
CYME_CMT501C CDS
T00175
Name
(RefSeq) probable transcription elongation factor S-II
KO
K03145
transcription elongation factor S-II
Organism
cme
Cyanidioschyzon merolae
Brite
KEGG Orthology (KO) [BR:
cme00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cme03021
]
CYME_CMT501C
Transcription machinery [BR:
cme03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
CYME_CMT501C
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Zn_ribbon_TFIIS
PWWP
TFIIS_M
Med26
MUM1-like_PWWP
DUF480
Motif
Other DBs
NCBI-GeneID:
16998091
NCBI-ProteinID:
XP_005539464
UniProt:
M1VMQ4
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All DBs
Position
20:complement(1259154..1261538)
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AA seq
794 aa
AA seq
DB search
MSDWEPYLGAFVWAKLPSYPWWPGVIAPDAKGNHRKGNRFNVNFFNDSQHAWVTRENLVA
FAENMDKCVKPTHRFYDAVRKAIAEAIEEGALSTAAMQTVTAATTDAAATDAALTEAAST
LRGARVAPASTASAAAADHATSDKRAGFLDSDPSEATATRRRLKQRRKIPAEDSDGTETA
ASSSEYAVSEPEHDLSEGDDGSAKCRDAYPARIDEASSESTAERRALDRSHDPNKRRAHK
RKSSTGTEWTPLSDGISSGTASGPAGASPGSLGTGNAQQVRMAERSRGAGSSSHGTGASR
TEHSRQLAALRQQNAQMKARLALLERKLEKYPPAPPEPTPLTLDAIRASATGLTSRRSIG
AEDLTRVVHGLEERSAMLSELHQAWSDRCSKYRECAAQLEDLRLAAARAAEAFELEERRI
ALQLAELLRYQVTLEVLRTSRAGKPIKTLGRSLHGKSAVIGRLAEEIISKWKAIVTEAQR
ESQEPSLLPTGESERLQTRDPSSSGSELLAAPNDATNARSGLNGAGRVQPDDLGPSLHTT
ADARMDVHGSVAGVADAAGREGAFAAVQQVATETGSFDAGPVSTLESAWNTANATEVDGD
QQQQQHSDRMQTEPMVSALPLPPGKRGDIVRALTDVFIAAATEEATPTEHVNAATINLCR
SLCIELERALNAKFSFDFARPDYSAKYRELKANLRRNADLRWRLLRQELSPAELVDMSAE
ALKTEQAREREAEIAERMLFHKQRGIPQAASTDQFRCGKCGQRSCTYFQMQTRSADEPMT
TFVTCTHCGNRWKC
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atgtccgactgggagccgtacctcggcgcgttcgtgtgggcgaagctcccgtcgtacccc
tggtggccgggtgtcatcgcgcctgacgctaaagggaaccaccggaaagggaatcgcttt
aatgtcaacttttttaacgatagtcagcatgcctgggtgacacgggagaacctggtcgcg
ttcgcggagaacatggacaagtgcgtgaaaccaacgcaccgcttctacgatgcagtgcgg
aaggctatagccgaggcaattgaagagggcgcgttgagcacagcagccatgcaaaccgtg
acagctgctacaacggatgccgctgctacggatgctgcactgacggaagcagcgtcgacg
ctgcgtggtgctcgtgtggctcccgcttcgacagcgtctgcggcagcagcggaccacgcg
accagtgacaagcgtgctgggtttctggactcggacccaagcgaggccacggctacgcgg
aggcgcctaaagcagagacgcaagataccagcggaggactccgatggaaccgagactgct
gcgagttccagcgagtatgccgtatccgagccagagcatgacctctcggagggcgacgac
ggcagtgccaagtgtcgtgacgcgtaccccgcacgaatcgacgaagcctcatccgagagt
accgctgagcgcagagcgctggatcgctctcacgacccgaacaagcgacgggcacacaaa
cgcaagtcgtccaccggcaccgagtggacgcctctgtccgacggcatctcttctgggact
gccagtgggccggcgggagcctcaccaggctccctaggtaccgggaatgctcagcaagtg
cgcatggcggaacgtagtcgtggagccggaagctccagtcacggcactggagcgagccga
accgaacacagtcgtcagctggctgcactgcgccagcagaacgcacagatgaaagcgcgt
ttggctctcctcgagcgcaagcttgagaagtatccgcccgcaccgccggaacccaccccg
ttaacgcttgacgcgattcgggcaagtgcaacaggcctcacgagtcgacgaagtattggt
gctgaggacctcacacgcgttgtgcacggcctggaagagcgttcggcgatgctctctgag
ctgcatcaggcctggagcgaccggtgcagcaaatatcgcgagtgtgctgcgcagttagag
gatctccgtctggccgctgcgcgagccgccgaggcctttgagctcgaggagcgaagaatc
gcccttcagcttgcggaattactgcgatatcaggtaacgctggaggttcttcgaacgagt
cgagctgggaagcccatcaagacgctcggcaggagccttcacgggaagagtgcagtgatc
gggcggcttgccgaggagattatcagcaaatggaaagccatcgttacggaggcacagcgc
gagtcgcaggagccgtccctgttgccgactggcgagtccgagcggcttcaaacgcgcgat
ccgagtagctcgggttccgaactgctcgccgctccaaacgatgcgacaaacgcgcgatcg
gggttgaatggtgctggtcgtgtacaacccgacgacctcgggcctagcctgcatacaact
gctgacgccaggatggacgtgcacgggtctgttgccggggtagcggatgcggctggccgt
gaaggcgcgttcgcggcagtgcagcaggtcgctacagagaccggctccttcgacgctgga
cctgtgtcgacattggagagtgcgtggaacactgccaacgcaaccgaggtagacggtgat
cagcagcaacagcagcattcagaccgtatgcagacggagccaatggtgtcagcgttacca
ctgccgcccggaaaacgcggagatatcgtgcgagcgctgactgacgttttcatcgcagca
gcaactgaagaggcaacacctacagagcacgtgaacgcagctacaatcaatctgtgtcgt
tccctttgtatcgaactagaacgggcgctgaatgcaaagttctctttcgactttgcccgc
ccggactatagtgccaagtatcgggaactgaaagcaaacctacggcgaaacgcggacctg
cggtggcgtctactgcgacaagagctgtcgccagcggagctcgtggatatgagcgctgaa
gcgttgaaaacagagcaggcgcgggagcgggaagcggaaattgctgaacgaatgctcttc
cacaaacaaaggggtattccacaagcagcaagtacggatcagttccgctgtggcaaatgc
ggtcaacgttcctgcacctatttccaaatgcaaacacgctccgcagatgaaccgatgacg
acgtttgtgacgtgcacacactgtggaaatcgatggaagtgctaa
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