Cyanidioschyzon merolae: CYME_CMT566C
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Entry
CYME_CMT566C CDS
T00175
Name
(RefSeq) TATA-box binding protein-associated factor 2
KO
K03128
transcription initiation factor TFIID subunit 2
Organism
cme
Cyanidioschyzon merolae
Pathway
cme03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cme00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
CYME_CMT566C
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cme01002
]
CYME_CMT566C
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cme03021
]
CYME_CMT566C
03036 Chromosome and associated proteins [BR:
cme03036
]
CYME_CMT566C
Peptidases and inhibitors [BR:
cme01002
]
Metallo peptidases
Family M1
CYME_CMT566C
Transcription machinery [BR:
cme03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
CYME_CMT566C
Coactivators
SAGA/TFTC/STAGA complex
CYME_CMT566C
Chromosome and associated proteins [BR:
cme03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
CYME_CMT566C
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
16997714
NCBI-ProteinID:
XP_005539515
UniProt:
M1VD07
LinkDB
All DBs
Position
20:complement(1431975..1436309)
Genome browser
AA seq
1444 aa
AA seq
DB search
MDGNRSSPTLRKTTGSRTPQERGAEELRARKHRSKASSAAAPTLLRLPTSHGAGVLQPTH
ANNPGTDRKAQARAEHTRGDASQGGGLGPRLDRVQLRVDVDFAERKLRGRALLYFQVPNA
LRQPGTTKYKGDASDTLELRINLRCCAIQAVTVNDRAVEYRLQSPLDGTEVMQAIADRIY
PPPTMEELEMMLSRQARHAAHGELLVFVPWSILGASRTAEPLPPPGDPTAATNPVDVTGT
SPNDLSKSSSEARSACKDPQAEPVSVAEADALVDRIPRSETEPRSTTAPLGTKIDATWTK
PTVSIGLRLQVEYTTLPESPAVHFCGHANGEPLDVFDGSGAAEDALLFDQRLPEQQQLLL
LQQQPLPILVEHMYVESHSGLASTWMPCLNPPNAVLANSGVRCAYDLEITVPTGMIAVAS
GELKGSSLEESTEAGRASRTRFVFQVPEPVLASDIAFSAGLFRVLPDRIRPQSVTYFCLP
GFVRQLVNTVDFLPAAMEFLENYFGVPCPCASLKFVFVDGFGMHLPSVYPGGGLVVLSSI
LLFSDRVVDDVFDSHRRMVTALASFWMRRLLRPLHTADLWLFVGIEEYVGALCLRKLFGN
TWFRLYLRDAMKSLVESPGSLRWSPAEQPAAESHEPSRRFSMLLIAAIDRRAERKLIQVQ
STSGASTGRKHHAARVDVGEGIRSTLHSLLVMPPRHHAVGLKPFLKLLERRTGVELLAFV
RQYVVSNSMPLFHCGYRYDPKEHKIEVAVRQTNHRRQSGVVTEPLVFRGTLRLSIREPEE
HYTIDLEIQESVHVFDVYCRTRKVGLGVRGRAAAAAAAAAAAATSVDHPDIGGTSSADAT
TTTTTPAGERLPLTHDPIMWIRVDPDMEWVRGVFWRQNERAWVRQLAGERDVSSQMDCCD
ALYLHATAIGVRGLAEHGLLNEQVHYRVRSAAAASIARWGGSETRFLGLEILVDFYANRY
LVGEDQVLPRSDAKEDNHLANVDASDALVGSQADAATTAATAPGRLQEKRARLGREWLQR
LPRPLDFSRNLAEYFLQRAMLRALGGIRVAQTGEGAQRTPTDLFALLDHVLRFHNNEANM
FDDAYFLRDALLAFASASSTNEGLRTMEVARCIERFLNRDRLFPSHQRALTAGCIEAAAE
LVSIQRQCVTSDRSSSEAVRIQNDFERLVWSTLLGPVRVELDRFDEAPTRSRFEQYLARV
WWLHRPFRAAVEGLVRTAGDRPEVVRSLLVIAAVAPEPLYPVLVLRAMCKFASRTTKLAI
LLRSEHEMAAVAVRQVLRLFARYRHPVARQAAVEFFRTMWGFGEPAPLLTRDEYGRRLKM
RSLGMHAHDAVAGSRASLMPPERFEAPLIIRVPAVTSREATDEAPANSDRAGQRYHGSAV
TADAGSVPAGSGAPEPVVVVRLPPMETSGASSVLPNCDFEDQVYLNYARTKLFGEESSTN
DQET
NT seq
4335 nt
NT seq
+upstream
nt +downstream
nt
atggacggtaaccgttccagtcctacactgagaaaaacgacagggagccgtacgccgcag
gaaagaggagctgaggagctacgagcgcgcaagcaccgctccaaagcgtcatcagctgca
gcgccaacgcttttgcgcttgccaacgagtcatggcgccggtgtgttgcagcctacgcac
gcaaacaacccagggactgatcggaaggcccaagcccgcgcggagcatacccgcggtgac
gctagtcagggcggtggtctcggacctcgccttgatcgcgtgcaactgcgagtggacgtc
gactttgccgagcgcaaactacgcggccgagcactgctctatttccaggtaccgaatgca
ctgcgtcagccagggacgacaaaatataagggagacgcatccgataccctagaactgcgc
ataaacctccggtgttgtgcgattcaggcggtaaccgtgaacgaccgcgctgtggagtat
cgcttgcagagtccgctcgacggtaccgaggttatgcaggctattgctgatagaatctac
cctccgccaacaatggaggagctggaaatgatgctctcacgacaggctcgtcacgccgcc
catggtgagcttctggttttcgttccatggtcgatattgggagccagccgaaccgcagag
ccgctgccaccaccaggggatcccactgctgccacgaaccccgtggacgttactggaaca
tctccgaatgatctttcaaagtcgtcgtccgaagcacgaagcgcatgcaaagatccacaa
gcggagccagtttcagtggcggaagcggacgcgctggtggaccgcatacctcgctcagag
acggagccgcgctcgacaacggcaccactggggacgaaaatcgacgcgacttggaccaaa
ccgactgtaagcataggtctccgtctgcaggtagagtatacgacgcttccagagtcacca
gcggtgcatttttgcggacatgctaacggagagccccttgacgttttcgatggcagcgga
gccgctgaagatgcgctgctcttcgaccaacgcctgccggagcagcagcagctgctgctg
ctgcagcaacagcctctaccgattctcgtggaacacatgtacgtggagtcgcacagcggt
ttggcgtcaacgtggatgccgtgtctgaacccgccgaacgcagtgctcgccaacagtgga
gtgcgctgcgcctatgacctggagataaccgtgccaactgggatgattgcggttgcctcc
ggggaactcaaaggcagcagcctagaagagagcactgaggcgggtcgagcatctcgcaca
cgttttgttttccaggttccggagccagtacttgcgagcgatatcgcgttttctgccggc
ttgtttcgggtgcttcccgatcgaatacgacctcagagcgtcacctatttttgtttacct
ggctttgttcgccagttagtgaacacggtagactttttgcccgcggcaatggaattcctc
gagaactattttggtgtgccctgtccctgcgcttcgctcaagtttgtctttgtggatgga
ttcggcatgcatctgccgagtgtgtatcccggtggaggtctcgtcgtgctttcctcgatt
ttactgttctcggatcgagtcgtggatgacgtgtttgactcgcaccggcgcatggtgact
gcgctggcatccttctggatgcgtcgcttgctgcgaccactgcatactgctgacctctgg
ttgtttgtgggtatcgaggaatacgtcggtgcgctctgtctccgcaagctcttcgggaac
acctggttccgtctgtatttacgggacgcgatgaagtcgctcgtggaatctccaggctcg
ctgcgttggtcgcccgccgagcagccagcggccgagtcgcacgagccttctcgacgcttt
agtatgctgctgattgcggccatcgatcgccgagcggagcgcaaactcatccaagtccag
tcgacaagcggagcatcgacagggcgcaaacatcacgcagctcgggtcgatgtcggtgaa
ggtatccgctccacgctgcacagcttgctggtgatgcctcctcgccatcatgccgtcggt
ttgaaacctttcctgaagctccttgagcgacggactggcgtggagttgctcgcatttgtt
cgccagtacgttgtaagcaatagtatgccgctttttcattgcggctatcgatacgatccc
aaagagcacaagatcgaggtcgctgtgagacaaaccaatcatcgtcgacagagcggtgtt
gttacggaaccgctggtatttcgcggtactctgcgcttgagcatacgtgaacccgaagag
cactacaccattgatttagagattcaagaaagcgttcacgtttttgacgtctactgccgt
acccgcaaggtaggtctcggtgtacgtgggcgagcagctgcagcggcggcagcagcggca
gcagcagcaaccagcgtcgatcacccggatattggcggtaccagcagcgctgacgcaaca
acgacaacaacgacacccgctggagagcgactcccgctgacccatgatccgattatgtgg
atccgcgtcgaccctgacatggagtgggtcaggggggtattctggcgccagaatgagcga
gcctgggttcgtcagcttgccggagaacgcgacgtatcaagtcagatggactgctgtgat
gctctttatctgcatgcaaccgcaataggtgtgcgcggtctcgcagagcacggcctcctg
aatgaacaggttcactatcgtgtgcgcagcgctgcagcggcaagtattgcccgctggggt
ggtagcgaaacccgctttctcggccttgaaatacttgtagacttttacgcgaatcggtac
cttgttggtgaggaccaagtgcttcctcgttcggatgccaaggaggataaccatttggcg
aacgtcgacgcctcggatgcactggtaggtagtcaggcagacgcagcgacgacagcggca
actgctccagggcggttgcaggagaagcgagcaaggctcgggcgcgagtggctgcaacga
cttccacgaccgctggatttcagtcgaaatctggcggaatattttttgcaaagagctatg
ttgcgagccctcgggggcattcgggtcgcgcaaactggtgaaggcgctcagcgcacgcct
accgatctatttgcgttgctagatcacgtgctgcgttttcataacaacgaagcgaatatg
tttgacgatgcgtattttctacgggatgctttgctggcttttgcctctgcgtccagtacc
aatgaaggcttgcgcaccatggaggtggcacgctgcatcgaacgctttctgaaccgtgat
cgactgttcccgagtcatcagcgagcgctcactgccggttgtatcgaggccgcagccgag
ctggtctccatccagcggcaatgtgtaacgtccgaccgctcgtcatccgaggcagttcgt
attcagaacgatttcgagcgtctcgtttggagtacattgcttggtccagttagagtcgag
ctcgatcggttcgatgaggcgcccactcgatctcgattcgagcagtacctggcccgcgtc
tggtggctccatcgtccgtttcgagcggcagtcgagggtctcgtgcgaacggccggtgat
cgtcccgaagtggttcgatcgctgctggttattgctgcggtggcaccggagccgctctat
ccggtgttggttttgcgagccatgtgcaagttcgcttctcgaacgacaaagctggcgatt
ttgcttcgcagcgagcacgaaatggctgcggtggcggttcgtcaagttctgcgcctcttt
gcgaggtatcgtcacccggttgcgaggcaggctgctgtggaattcttccgaaccatgtgg
ggctttggggaaccggcgccgctgttaactcgtgacgagtacggacgtcgcttgaagatg
cgctccctgggtatgcacgcgcatgatgcagtggcggggtcgcgtgctagtctgatgccc
ccagagcgtttcgaagcaccgttgattattcgggtcccggctgtaacttccagggaagct
actgacgaagcgccagcaaactcggaccgggctgggcaaagataccatggctcagcggta
accgcagatgccggatcggtgccggcgggcagcggcgcacccgagcccgtggtcgttgtg
cggctgcctccgatggagacctcgggagcgtcgagcgtcttgccaaactgcgatttcgag
gaccaagtgtacttgaattatgcgcgaacgaagctgttcggtgaggagtcttcgaccaac
gatcaggagacatag
DBGET
integrated database retrieval system
