KEGG   Cyanidioschyzon merolae: CYME_CMT583C
Entry
CYME_CMT583C      CDS       T00175                                 
Name
(RefSeq) RNA polymerase II subunit
  KO
K03012  DNA-directed RNA polymerase II subunit RPB4
Organism
cme  Cyanidioschyzon merolae
Pathway
cme03020  RNA polymerase
cme03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:cme00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    CYME_CMT583C
  09124 Replication and repair
   03420 Nucleotide excision repair
    CYME_CMT583C
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cme03021]
    CYME_CMT583C
   03400 DNA repair and recombination proteins [BR:cme03400]
    CYME_CMT583C
Transcription machinery [BR:cme03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     CYME_CMT583C
DNA repair and recombination proteins [BR:cme03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      CYME_CMT583C
SSDB
Motif
Pfam: RNA_pol_Rpb4
Other DBs
NCBI-GeneID: 16997781
NCBI-ProteinID: XP_005539528
UniProt: M1VIP7
LinkDB
Position
20:complement(1482097..1482507)
AA seq 136 aa
MDLGVDQEENAENLKFGELFGDNEHCQPLLICEVAELLRQKRAELPAELQSSLGPIFVKS
EAYVERFNQFRSAEVAKVVRVRLERHPELHPFERAQLANLLPETPAEAKAIIPSLKGKLD
DDVLGQLLRDLAALVE
NT seq 411 nt   +upstreamnt  +downstreamnt
atggacctgggcgtggatcaagaagagaacgctgaaaacctcaagtttggggagctattt
ggcgacaatgaacactgtcaaccgttattgatctgcgaagttgcggaactgctacggcag
aagcgcgcagagctaccagccgaactgcagagctcgttaggtcccatcttcgtcaagtcg
gaagcctatgtcgagcgttttaaccagttccggtctgcagaggttgcgaaagttgtgcgg
gtgcgactcgaacgccatcccgaactgcacccgttcgagcgtgcgcagctcgcaaacctg
ctgccggagacacctgcagaagcgaaggccattattccgagtttgaagggaaagttggac
gatgacgtgctgggtcaacttcttcgtgacttggcagcgctcgttgagtga

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