KEGG   Cyanidioschyzon merolae: CYME_CMT617C
Entry
CYME_CMT617C      CDS       T00175                                 
Name
(RefSeq) coatomer protein complex, subunit beta 2
  KO
K17302  coatomer subunit beta'
Organism
cme  Cyanidioschyzon merolae
Brite
KEGG Orthology (KO) [BR:cme00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cme04131]
    CYME_CMT617C
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cme04147]
    CYME_CMT617C
Membrane trafficking [BR:cme04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Retrieval pathways
   Coat protein complex I (COP-I)
    CYME_CMT617C
Exosome [BR:cme04147]
 Exosomal proteins
  Exosomal proteins of colorectal cancer cells
   CYME_CMT617C
SSDB
Motif
Pfam: B-prop_COPA_B_2nd TPR_COPA_B WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 WDR55 Beta-prop_EIPR1 Beta-prop_TEP1_2nd Beta-prop_WDR75_1st Beta-prop_WDR90_POC16_2nd Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_TEP1_C Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_RIG_2nd Beta-prop_IFT140_1st WD40_MABP1-WDR62_1st Beta-prop_DCAF4 Beta-prop_SPT8 Beta-prop_HPS5 PEP5_VPS11_N Beta-prop_SCAP Beta-prop_Vps41 Clathrin
Other DBs
NCBI-GeneID: 16997903
NCBI-ProteinID: XP_005539552
UniProt: M1UY38
LinkDB
Position
20:1568178..1570895
AA seq 905 aa
MPLRLDPVKVAQVRSERVKGVELHSREPWVLVALYTGQVLIFDYDRCVALKQFEVSDQPV
RCARFVERKNWVIAAADDLYVRVYNYNTMEKVCEFEAHQDYVRSIAVHPTRPLLLTASDD
MAIKLWDWERNWNCTMVFEGHSHYVMQVVFNPKDPNTFASASLDCTVKIWSLSSPVPNMS
LEGHRKGVNSVDYYPGNDKPFLISGGDDERAIVWDMQTRTPAQELVGHTANVSAVQFHPV
RPLILTASEDGTVRVWNSNTYRLETMLSYGFERCWSLACLRSSSVIAIGCDLGTIVVRIG
KDEPVYSMDQSGKVVFAKNNEIFFVALRQAQLDQVADGARVSAPLKEMGTTEIYPQRISH
SPNGRFIAVCGDGEYMIYTALAWRNKSFGTGDELVWDNGPGEYAVREGNARVHVFNRMQK
ERAVIRAPFPIKAIYGGPLLGLGGEDCICFYDWASLQIVQRIDVAATNVLWSDTADLLAI
ITSDSFFVVRYNRSTVDAALEASQGVLGADGVDDAFSVLHEQADRIGTGRWSGECFVFCT
HSGRLAFLVGTESTTIAHLDRQLYLMGYLPTDNRVYLVDRDLQIISYALLASIVQFKSYI
QKGMLREALDLLQSIPHAEHNRLAQSLERAGYKQAALEVATDTDYRFELALTLNKLDLAR
SIAEQAPSETRWRQLSEAAMANNDLPLAEICMRNAHDASSLLLLQVARGDAAGLRDVASI
ALRAGESNTAFLAKLLLHDRQGCLDILIQSQRFPEAALFARSFIPSKLAETVQLWKKWLR
SKGEDRAAERLVDPALHPERFPGVPRSPLADHGLADARNGTNSVSDEKTEANKRTQVNLV
SDLPDVSQLALDPGSPVVSSTGTADAQRQSTDDELGRSPASAGPSSLEVARTRSVSHDSN
WDVDF
NT seq 2718 nt   +upstreamnt  +downstreamnt
atgcctctacgtcttgatcccgtgaaagttgcccaggtgcggagtgagcgcgtcaagggt
gtagagctacactcgcgagagccgtgggtgctggtggccctctacaccggccaggtgctg
atcttcgactacgatcgctgtgttgcgttgaagcagttcgaagtgtcagaccagccggtg
cgttgtgcgcgcttcgtggagcggaagaactgggttatcgccgccgcagatgatctctac
gttcgtgtctataactacaacaccatggaaaaagtgtgcgagtttgaagcgcatcaggac
tatgtgcgttcgatagctgtgcacccgactcgccctctgctcctgacagcttccgacgac
atggctatcaaactgtgggactgggagagaaactggaactgcacgatggtattcgagggt
cactcgcactacgttatgcaggtggtgttcaaccccaaggatccgaacacgttcgcctca
gcgtcactcgactgcaccgtgaaaatctggagtctgtcgagcccagttccgaacatgtcg
cttgagggtcaccgcaagggcgtcaacagtgtcgactactacccgggtaacgacaaaccg
ttcctgatcagtggcggcgacgatgagcgcgcgatcgtctgggatatgcagacaaggacc
ccggcacaggaactcgttggccacacggcgaatgtcagtgctgtacagtttcacccggtg
cgtccactgatactcaccgccagcgaggatggcaccgttcgtgtgtggaacagcaacacc
taccgtctagagacgatgctgtcgtacggctttgagcgctgctggagcctggcttgtctc
agatcgagcagcgtcatcgccatcggctgtgacctcgggacgatcgtcgtgcgcatcgga
aaggacgagcccgtttacagcatggatcagagtggaaaagtggttttcgcaaaaaacaac
gagatattcttcgtagcgctgcgtcaagcacaactggatcaggtagcggatggtgcgcgc
gtttcggcaccgttgaaggagatgggtaccacggaaatctacccgcaacgaatcagtcat
tcaccgaacggccgtttcattgcagtttgcggcgatggcgagtacatgatctatacggcg
ttggcatggcgtaacaaatcgtttggcaccggagacgagcttgtctgggataatggcccg
ggagagtatgccgtccgtgaaggcaacgcccgggtgcacgtcttcaatcgaatgcagaag
gaacgggcggtcattcgcgcaccttttccgatcaaagcgatttacggtggaccgctgctc
ggccttggcggtgaggattgtatctgcttctacgactgggcttcgttacaaatcgtccag
cgtattgacgtagctgcaacgaacgtgctatggtccgacacagccgatctgcttgcgatt
ataacatcagatagctttttcgtcgttcgctacaatagatccacagtggatgcagctcta
gaagcgagtcagggagtgcttggcgcggacggcgtagacgacgcattctctgtgctccat
gagcaggccgatcgcattggtacgggtcgttggagcggggaatgctttgtcttctgcaca
catagcgggcgtctggcgttcctcgtggggaccgaatccacgaccatcgcgcacctggat
agacagctgtacctcatgggctatctgccgacggacaatcgcgtgtacctggtcgatcgt
gacctccagattatctcatatgctttgctcgccagcattgtgcagtttaagtcctacatc
cagaaaggcatgctcagggaagcgctcgacctgctccagtcaataccgcacgccgagcac
aatcgtctcgcccagtcccttgagagagccggatacaagcaggcagcgctggaggttgcc
acggataccgactatcgctttgagttggccttgactctgaacaaactggatcttgcacgt
tccattgcggagcaagcacccagtgagactcgttggcgccagctctccgaagctgcaatg
gccaacaatgatctcccactggccgaaatttgcatgcgaaacgcccacgatgccagcagt
ttactgttgttgcaggtagcgcgcggcgatgccgccggcctccgcgacgttgcctcgatt
gcgctcagggcaggcgaatcgaatacggcatttttggcgaagctgctcctgcacgatcga
caaggctgcttggacatcctcattcagagtcagcgatttccagaggctgcgctgtttgct
cgcagttttataccgtccaagcttgccgagactgtccagttatggaagaaatggctccgt
tccaagggtgaggatcgcgcagccgagcgcctggtagatccggcgttgcatcctgaacgc
tttccaggcgtaccgcgctctccactggccgatcacggattggccgatgccagaaacgga
accaacagcgtctcagatgaaaagaccgaggcgaacaagcggacacaagtcaacctggtc
tccgatctacccgacgtatctcaactcgccctggaccctggttcacctgtcgtgagcagc
actggcacggcagacgcgcagcgtcaaagtacggatgatgagctggggcgctctccagcg
agtgcgggtccgagctctctcgaggttgcgcgaacgcggtccgtttcgcatgatagcaac
tgggatgtcgacttttga

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