Cyanidioschyzon merolae: CymeCp185 Help Entry CymeCp185         CDS       T00175                                  Symbol rpoC Name (RefSeq) RNA polymerase beta' chain   KO K03046   DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] Organism cme  Cyanidioschyzon merolae Pathway cme03020   RNA polymerase Brite KEGG Orthology (KO) [BR:cme00001]  09120 Genetic Information Processing   09121 Transcription    03020 RNA polymerase     CymeCp185 (rpoC)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:cme03021]     CymeCp185 (rpoC)    03400 DNA repair and recombination proteins [BR:cme03400]     CymeCp185 (rpoC) Enzymes [BR:cme01000]  2. Transferases   2.7  Transferring phosphorus-containing groups    2.7.7  Nucleotidyltransferases     2.7.7.6  DNA-directed RNA polymerase      CymeCp185 (rpoC) Transcription machinery [BR:cme03021]  Prokaryotic type   Bacterial type    RNA polymerase     Core subunits      CymeCp185 (rpoC) DNA repair and recombination proteins [BR:cme03400]  Prokaryotic type   SSBR (single strand breaks repair)    NER (nucleotide excision repair)     TCR (transcription coupled repair) factors      DNA-directed RNA polymerase complex (RNAP)       CymeCp185 (rpoC) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  RNA_pol_Rpb1_1 RNA_pol_Rpb1_5 RNA_pol_Rpb1_2 RNA_pol_Rpb1_3 RNA_pol_Rpb1_4 Peptidase_M23 Biotin_lipoyl_2 Cas9-BH Motif Other DBs NCBI-GeneID:  844996 NCBI-ProteinID:  NP_849117 UniProt:  Q85FR6 LinkDB All DBs Position CP:131458..136488 Genome browser AA seq 1676 aa AA seqDB search MCDAIQIRLASPERIRSWAERVLPNGQVVGEVTKPETINYRTLKPEMDGLFCERIFGPVK DWECHCGKYKKVRYKGIVCERCGVEVTESKVRRHRMGYIDLAAVVSHVWYLKGPPSYLAL FLNMSSSEVEQVIYFHSYVVLQSTTELVQPKQLLSEDELIILEERLANQPFQVGIGAQAI QYLLQQLDLDMEIRVLRNQLFHAKSSKREKLMKRLRILDNFASTGADPSWMILSVLPVIP PDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLQEILAPEIIIRNEKRMLQEAVDAL MDNGRRGRSVVGANNRALKSLSHILEGKQGRFRQNLLGKRVDYSGRSVIVVGPELKLYQC GLPKEMALELFQPFVIQRLMAQGLANNMKAAKKIIQRKEAIVDQILHQVVKAHPVLLNRA PTLHRLGIQAFDPILVDGRAIQLHPLVCAAFNADFDGDQMAVHVPLSVEAQAEARLLMLS VNNFLSPATGDAIIMPSQDMVIGCYYLTANNPASQAKQSHYFADFEHVLMAFEQKQINLH TWVWVHVNNNLNIILERSALQEDWIQTRGESLFLKTTPGRIIFYQQAAYHVGFYNLTINK SHLKELVKTVYNLKGMACATQLADDLKQLGFHYATTCGLSLGIEDLRVAPSKQKIFQWAQ QAIEKTEQLWQRAQITHVEKFHKVVDTWSEASETLKQEVVRYYEHTDPLNPVYMMAFSGA RGNLSQVRQLVGMRGLMADPHGQLIDLPILSNFREGLTVTEYLISSYGARKGLVDTSLRT ADSGYLTRRLVDVAQDVIIRQADCGTLRGIAVPVSKALIGRVLAQDVNEECKRNQLITAD MLVALRDTKQVIVRSPLTCEALRCICQLCYGGNLAYGHMVDLAEAVGIIAAQSIGEPGTQ LTMRTFHTGGVFTSAQTASVRATLDGVVTYEGRCKSTRTRYGQEAWLLETSTPLFLQNDG QQHRYDFQAGTVLLVKSGQRVKFNTLLAYLPTSTRFEKATKSVDAHNAGEVVFDQLKLEQ NLVKKEGILWILSGQMLHLPAGSELLVSNEQQIKPAQVLAQSYLRSRAKGIVQIHTNQVE LILDRLSFEVKEPFHFHSGDGQIIAEKFEHQTPTGGQVFHRNGQIWLVPAAIYEVSSQKD LVDIKHGQFILANQRSICGVKNELSGWVQLVKQNEVIKEIRIRPGIYLPKVKTNQLGFVQ SHLLLSSYGINAYTRRFCYVENYEQGILISPVYVFAGVSPPKIVAKSRWLSLVMYQTCMF QHQQWVKSYKKVYLMRCQLQLKVAPQAPLNQVTVHKEKNRREWRLSYFSNIKLQAFQTIK WLVKNHQRVEADVPLALIQLVSAFNGIVRYHPMLNRLLVVSDQDVITYSIGKPHHFQIGD VIRIGDQISHGLVAKTSGFVIARDANQIQVRIAQGYFLSRETICYVKDGDLVNEGDHLAS LVFEQVKTGDIIQGLPRIEEILEARKPKNSCELAQFDGVIQEQSLVSDDGRVQAIKGTLI VCEGTRVQAGEPLTDGAVNAHEWLQIHFNNAVPYRGMVEAARESFAKLQAKLLHQVQQVY KSQGVDIADKHIEVILRQMTSKVILDDPGDSDFLPGQLVYLNEIASYKHVIFHPVLLGIT KAALNTESFISAASFQETTRILAQAAMEGQIDQLRGLKENVIMGRLIPAGTGAKYL NT seq 5031 nt NT seq  +upstreamnt  +downstreamnt atgtgtgatgcaatccaaattagattagcttctccagaacgcattcgtagttgggctgaa cgtgttttacctaatgggcaagtggtaggagaagtcactaaaccagagaccattaattat cgtacccttaaacctgaaatggacggactcttttgtgaaaggatttttggtcctgtaaaa gactgggaatgccattgtggaaaatataagaaagtacgttataaaggcatcgtttgtgaa aggtgtggtgtggaagtgacggaatccaaagtcagacgtcatcgcatgggctatatagat ttagctgctgtagtttcccacgtttggtatttaaaaggtcctccgagctatttagccttg tttttaaatatgtcttcatcagaagtagaacaagtgatttacttccattcttatgtggtc ttacaatctaccacggaattggttcaaccaaaacaattattatctgaagatgaactcatt attttagaagaacgtttagctaatcaaccttttcaagtaggaattggcgctcaagctatc caatatttattacagcaactagatttagacatggaaatacgtgtgttaagaaatcaatta ttccatgctaaatcgtcaaaaagagaaaaactcatgaaaaggttgcgaattttagataat tttgccagtacaggcgccgacccaagttggatgattttgagtgtcttaccagttatccca cctgatttaagaccaatggtgcaattagacggtggacgatttgctacttctgatctaaat gatttataccgacgagtgatcaatcgtaataatcgtttgaaacgtctacaagagattttg gcaccggagatcattattcgtaatgaaaaacgcatgttacaagaggcggtagacgcactg atggataatggtcgaagaggtcgcagcgtagtaggagctaataatcgtgctttaaaatct ttatctcacatcttagaaggtaaacaaggacgttttagacaaaatttactaggtaagcgt gtagattattcgggtcgttctgtcattgtggtaggacctgagttgaaactctatcaatgt ggtttgccgaaagaaatggctttagaactttttcaaccttttgtgatccaacgtttaatg gcacaaggcttagctaacaatatgaaagcggccaaaaaaattattcaacgtaaagaagcc attgtggatcaaattcttcatcaagtagtcaaggcgcatcctgttttactgaaccgtgca cctactttacatcgattaggtattcaagcctttgatcctatcttggtggatggacgtgcg attcaattacatcctcttgtatgtgctgcttttaacgctgatttcgatggggatcaaatg gctgtgcatgtacctttatctgtggaagcgcaagcagaggctcgacttcttatgctttcg gtgaataattttctttctcctgctacaggggatgccattatcatgccttcacaggatatg gtcataggttgttattatctcacagccaacaatccagccagtcaagcaaaacaatcgcat tattttgctgattttgagcatgtgcttatggcttttgaacaaaaacagataaatttacac acatgggtgtgggttcatgtcaataacaaccttaatatcatacttgaacgtagtgcttta caagaagattggattcagactcgtggcgaaagtttgttcctgaaaaccacacctggccga attattttttaccaacaagcagcttaccatgtgggattttataatctcaccattaataag tcacatttaaaagagcttgtcaaaactgtttataacttaaaaggtatggcttgtgctacc caattagcagatgatttaaaacaactaggttttcactacgctaccacttgtggtttatcc ttgggtattgaagacttacgagtagcaccttccaaacaaaaaatttttcaatgggctcaa caagccatagaaaaaacagagcaactttggcaaagagctcaaattactcatgtagaaaaa tttcataaagtagttgatacctggtcagaagcttctgagacgttaaaacaagaagtggtg agatattatgaacatacagatccacttaaccctgtctacatgatggctttttctggtgct cgtgggaatttatctcaggtacgccaattagtagggatgcgaggcttaatggctgaccca catggacaattaatcgatttacctattctttctaatttcagagaaggtttaactgttacg gaatatttaatttcttcttatggagcacgaaaaggactagtagatacttctcttcgtacc gcggattctggttatcttactcgtcgtttggtggatgtggctcaggatgttattattcgt caagctgactgtggtactttgagaggtattgcagtgcctgtatcaaaggctttaattgga cgcgttttagcacaagatgtcaacgaggagtgtaaacgaaatcaactcatcactgccgat atgttagtggccttacgtgatacaaaacaagtcattgtacgttcgccattaacgtgtgaa gctcttcgttgtatatgccaactttgttatggtgggaatttggcttatgggcatatggta gatttagctgaagccgtaggtatcatagcagcacaatcaattggtgaaccgggtactcaa ttgacaatgcgcactttccatacaggtggtgtctttacttcagctcaaacagcatccgtt cgagcaactcttgatggtgttgttacttatgaaggtcgatgcaaatcgacacgcacacgt tatggacaagaagcatggcttttagaaacgtcaacaccattattcttgcaaaatgatggc caacaacatcgttatgattttcaggctggcacagttttgttagttaagtcaggacaacga gtcaaattcaatactttattagcctatttgcccacttctacacgctttgaaaaagctacg aaaagtgttgacgcacataatgccggagaagttgtctttgatcaattaaaattggaacaa aatttagtcaaaaaagaaggcatcctttggattttgtccggtcaaatgctccatttacca gcaggaagcgaattattggtatcaaatgaacaacagattaaacctgcacaagttttagct caatcatatttacgttctcgcgcgaaaggaattgttcaaattcataccaatcaagtggaa ttaattttggaccgtttaagttttgaagtgaaagagccttttcatttccatagcggtgat ggtcaaattattgcagaaaaatttgagcaccaaactcctacaggaggtcaagtttttcac agaaatggtcaaatttggttagtacctgccgctatttatgaagtaagttcacaaaaagat ttagtagatatcaaacatggtcagttcattttggccaatcaacgtagtatatgtggtgtt aaaaatgaacttagtggttgggtacagttggtgaaacaaaatgaagttatcaaagaaatt cgtattagaccaggcatttatttaccaaaggttaaaacgaatcagttaggctttgttcaa tcacatttactcctatcttcttatggtataaacgcttatacgcgtcgcttttgttatgta gaaaactatgaacaaggtattttgatttcacctgtctatgtgtttgctggggtttcacca cctaagattgttgctaaatcacgttggctaagtttagtgatgtatcaaacgtgcatgttt caacatcaacaatgggtgaaatcatacaaaaaggtgtatctcatgcgatgccaattgcaa ttaaaagttgctcctcaagcacctcttaatcaagtgacggtacataaagaaaaaaatcga cgtgaatggcgactatcttatttttctaatataaaattgcaagctttccaaaccattaag tggttagtcaaaaatcatcaaagagtggaagctgatgttcctttagccttaatccaattg gtaagcgcctttaacggcatcgtgcgttatcatcctatgttgaataggttgttagttgta tcggatcaagatgtgataacctattccataggtaaaccacaccatttccaaataggtgat gtcattcgtattggtgatcagataagccatggtcttgtagcaaaaacgtcaggctttgtc atagctagggatgcaaatcaaattcaagttcgcatagctcaaggttattttttatctaga gaaacgatttgttacgtgaaagatggtgatttggtcaatgaaggtgaccatttagcatca cttgtgtttgaacaagtgaaaacaggggatattatccagggtttacctaggattgaagaa attctagaagcacgaaaacctaaaaatagttgcgaattagcacaatttgatggcgtcata caagagcagtcccttgtgagtgatgatggtagagtgcaagcaattaaaggtactttaatc gtttgtgaaggcactcgtgttcaagcaggcgaacccctaacggatggtgctgttaatgct catgaatggttacaaattcatttcaataatgcggtgccatataggggaatggttgaagca gcacgcgaaagttttgccaaattacaagcgaaattacttcatcaagttcaacaagtatat aaatcacaaggggttgacatagctgataaacatatagaggtcatcttgcgtcaaatgact tcgaaagtgattttagacgatcctggagacagtgattttttaccaggtcaactggtctat ttgaatgagatagctagctataagcatgtgatttttcatcctgttttattaggtattaca aaagctgctttaaatacggagagttttatttcggcagcaagtttccaagaaactacaagg attttggcgcaagcagctatggagggtcaaattgaccaattacgaggtttaaaagaaaat gttatcatgggcagattaattccagcaggtacaggagctaaatatttatga

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