Caminibacter mediatlanticus: FE773_03435
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Entry
FE773_03435 CDS
T05985
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
cmed
Caminibacter mediatlanticus
Pathway
cmed03030
DNA replication
cmed03430
Mismatch repair
cmed03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cmed00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FE773_03435
03430 Mismatch repair
FE773_03435
03440 Homologous recombination
FE773_03435
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cmed03032
]
FE773_03435
03400 DNA repair and recombination proteins [BR:
cmed03400
]
FE773_03435
Enzymes [BR:
cmed01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FE773_03435
DNA replication proteins [BR:
cmed03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FE773_03435
DNA repair and recombination proteins [BR:
cmed03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FE773_03435
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
QCT94264
LinkDB
All DBs
Position
621007..621753
Genome browser
AA seq
248 aa
AA seq
DB search
MFEKLLNKLKNGVTKKEFLTLTKKYYPDFDFKTIYELLKFQGLPLIQKQNKIFLKTKFTS
YNKSEYTILDLEVNNSKPKEGQIIEIGAVKLKNLVPIDEFSFLIYAKDIPRYVTKVTGIN
NQMLKNEKSQKEILEKFRLFLGDSVIVAHAADFDFNFLAKQFEKENLGYLLNPHLCTITL
AKKTLKANRYGLKYLKDELNLPEEIDHRALGDARTTTRVFLKSLENLPKSIKTTQDLIEF
AKPNKNKC
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atgtttgagaaattattaaataaattaaaaaatggagtaacaaaaaaagagtttttaacc
ttaacaaaaaaatattatccagatttcgactttaaaaccatatatgaattattaaagttt
caaggtttaccgttaattcaaaaacaaaataaaatttttcttaaaacgaaattcacttct
tataataaatcagaatatactattttagatttggaagtaaataattctaagccaaaagaa
ggacaaattattgaaattggagctgttaaacttaaaaacttagtaccaattgatgagttt
tcctttttaatttacgcaaaagatattccaagatatgttacaaaagttacaggtataaat
aatcaaatgctaaaaaatgaaaagtcacaaaaagaaattttagaaaaatttagattattt
ttaggtgatagtgttattgtagcacatgctgctgattttgattttaattttttagcaaaa
caatttgaaaaagaaaatttaggatatcttttaaatccgcatctttgtacaattacactt
gcaaaaaaaacattaaaagctaatagatatggtcttaaatatttgaaagatgaattaaat
ttaccagaagaaattgaccacagagcccttggagatgcaaggactaccacaagagttttc
ttaaagtctcttgaaaatttgccaaaatctataaaaactactcaagatttaattgagttt
gcaaaaccaaataaaaacaaatgttaa
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